RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 GPR182O15218 404 aa9.75□□□□□ -0.85
CTDNEP1-203ENST00000570385 PRPF3O43395 683 aaKnown RBP9.75□□□□□ -0.85
CTDNEP1-203ENST00000570385 GPR32O75388 356 aa9.75□□□□□ -0.85
CTDNEP1-203ENST00000570385 FGF18O76093 207 aa9.75□□□□□ -0.85
CTDNEP1-203ENST00000570385 GLP2RO95838 553 aa9.75□□□□□ -0.85
CTDNEP1-203ENST00000570385 PSAPP07602 524 aa9.75□□□□□ -0.85
CTDNEP1-203ENST00000570385 CRYBB1P53674 252 aaPredicted RBP9.75□□□□□ -0.85
CTDNEP1-203ENST00000570385 NLRP11P59045 1033 aaKnown RBP9.75□□□□□ -0.85
CTDNEP1-203ENST00000570385 ERVFC1P60507 584 aa9.75□□□□□ -0.85
CTDNEP1-203ENST00000570385 AKAP17AQ02040 695 aaKnown RBP9.75□□□□□ -0.85
CTDNEP1-203ENST00000570385 ZNF746Q6NUN9 644 aaPredicted RBP9.75□□□□□ -0.85
CTDNEP1-203ENST00000570385 EFCAB12Q6NXP0 572 aa9.75□□□□□ -0.85
CTDNEP1-203ENST00000570385 RNF135Q8IUD6 432 aa9.75□□□□□ -0.85
CTDNEP1-203ENST00000570385 THNSL1Q8IYQ7 743 aa9.75□□□□□ -0.85
CTDNEP1-203ENST00000570385 RNF169Q8NCN4 708 aa9.75□□□□□ -0.85
CTDNEP1-203ENST00000570385 BBXQ8WY36 941 aaPredicted RBP9.75□□□□□ -0.85
CTDNEP1-203ENST00000570385 PPP2R3CQ969Q6 453 aa9.75□□□□□ -0.85
CTDNEP1-203ENST00000570385 MSLNLQ96KJ4 702 aa9.75□□□□□ -0.85
CTDNEP1-203ENST00000570385 LARP6Q9BRS8 491 aaKnown RBP9.75□□□□□ -0.85
CTDNEP1-203ENST00000570385 TLE6Q9H808 572 aa9.75□□□□□ -0.85
CTDNEP1-203ENST00000570385 ATP6V0A4Q9HBG4 840 aa9.75□□□□□ -0.85
CTDNEP1-203ENST00000570385 RGS18Q9NS28 235 aa9.75□□□□□ -0.85
CTDNEP1-203ENST00000570385 TBC1D22BQ9NU19 505 aa9.75□□□□□ -0.85
CTDNEP1-203ENST00000570385 PCDHB12Q9Y5F1 795 aa9.75□□□□□ -0.85
CTDNEP1-203ENST00000570385 PCDHA10Q9Y5I2 948 aa9.75□□□□□ -0.85
CTDNEP1-203ENST00000570385 ZDBF2Q9HCK1 2354 aa9.75□□□□□ -0.85
CTDNEP1-203ENST00000570385 PLXNA4Q9HCM2 1894 aa9.74□□□□□ -0.85
CTDNEP1-203ENST00000570385 C5orf42Q9H799 3197 aa9.74□□□□□ -0.85
CTDNEP1-203ENST00000570385 EDIL3O43854 480 aa9.74□□□□□ -0.85
CTDNEP1-203ENST00000570385 ZNF862O60290 1169 aa9.74□□□□□ -0.85
CTDNEP1-203ENST00000570385 CSDE1O75534 798 aaKnown RBP9.74□□□□□ -0.85
CTDNEP1-203ENST00000570385 FGFR4P22455 802 aa9.74□□□□□ -0.85
CTDNEP1-203ENST00000570385 RPS6KB1P23443 525 aa9.74□□□□□ -0.85
CTDNEP1-203ENST00000570385 GNA11P29992 359 aa9.74□□□□□ -0.85
CTDNEP1-203ENST00000570385 HOXD11P31277 338 aaPredicted RBP9.74□□□□□ -0.85
CTDNEP1-203ENST00000570385 HSPA4P34932 840 aa9.74□□□□□ -0.85
CTDNEP1-203ENST00000570385 PBX3P40426 434 aa9.74□□□□□ -0.85
CTDNEP1-203ENST00000570385 RCAN1P53805 252 aa9.74□□□□□ -0.85
CTDNEP1-203ENST00000570385 SETQ01105 290 aaPredicted RBP9.74□□□□□ -0.85
CTDNEP1-203ENST00000570385 UGCGQ16739 394 aa9.74□□□□□ -0.85
CTDNEP1-203ENST00000570385 NAALADL2Q58DX5 795 aa9.74□□□□□ -0.85
CTDNEP1-203ENST00000570385 HFE2Q6ZVN8 426 aa9.74□□□□□ -0.85
CTDNEP1-203ENST00000570385 TEX2Q8IWB9 1127 aa9.74□□□□□ -0.85
CTDNEP1-203ENST00000570385 EFHBQ8N7U6 833 aa9.74□□□□□ -0.85
CTDNEP1-203ENST00000570385 COLGALT1Q8NBJ5 622 aa9.74□□□□□ -0.85
CTDNEP1-203ENST00000570385 VN1R2Q8NFZ6 395 aa9.74□□□□□ -0.85
CTDNEP1-203ENST00000570385 CCDC12Q8WUD4 166 aaPredicted RBP9.74□□□□□ -0.85
CTDNEP1-203ENST00000570385 LENG9Q96B70 501 aa9.74□□□□□ -0.85
CTDNEP1-203ENST00000570385 CCDC136Q96JN2 1154 aa9.74□□□□□ -0.85
CTDNEP1-203ENST00000570385 SCLT1Q96NL6 688 aa9.74□□□□□ -0.85
CTDNEP1-203ENST00000570385 SH2D3AQ9BRG2 576 aa9.74□□□□□ -0.85
CTDNEP1-203ENST00000570385 APOL5Q9BWW9 433 aa9.74□□□□□ -0.85
CTDNEP1-203ENST00000570385 UPF3BQ9BZI7 483 aaKnown RBP9.74□□□□□ -0.85
CTDNEP1-203ENST00000570385 TLR9Q9NR96 1032 aa9.74□□□□□ -0.85
CTDNEP1-203ENST00000570385 DISC1Q9NRI5 854 aa9.74□□□□□ -0.85
CTDNEP1-203ENST00000570385 C1orf112Q9NSG2 853 aa9.74□□□□□ -0.85
CTDNEP1-203ENST00000570385 USP15Q9Y4E8 981 aaPredicted RBP9.74□□□□□ -0.85
CTDNEP1-203ENST00000570385 FNDC1Q4ZHG4 1894 aaPredicted RBP9.74□□□□□ -0.85
CTDNEP1-203ENST00000570385 TMEM150BA6NC51 233 aa9.73□□□□□ -0.85
CTDNEP1-203ENST00000570385 WDR64B1ANS9 1081 aa9.73□□□□□ -0.85
CTDNEP1-203ENST00000570385 MSH4O15457 936 aa9.73□□□□□ -0.85
CTDNEP1-203ENST00000570385 DTNBO60941 627 aa9.73□□□□□ -0.85
CTDNEP1-203ENST00000570385 OATP04181 439 aa9.73□□□□□ -0.85
CTDNEP1-203ENST00000570385 PDIA3P30101 505 aaKnown RBP9.73□□□□□ -0.85
CTDNEP1-203ENST00000570385 CIITAP33076 1130 aa9.73□□□□□ -0.85
CTDNEP1-203ENST00000570385 NLRP5P59047 1200 aa9.73□□□□□ -0.85
CTDNEP1-203ENST00000570385 PRKCEQ02156 737 aa9.73□□□□□ -0.85
CTDNEP1-203ENST00000570385 DSC3Q14574 896 aa9.73□□□□□ -0.85
CTDNEP1-203ENST00000570385 NTRK3Q16288 839 aa9.73□□□□□ -0.85
CTDNEP1-203ENST00000570385 LONRF3Q496Y0 759 aa9.73□□□□□ -0.85
CTDNEP1-203ENST00000570385 ODR4Q5SWX8 454 aa9.73□□□□□ -0.85
CTDNEP1-203ENST00000570385 PLPP4Q5VZY2 271 aa9.73□□□□□ -0.85
CTDNEP1-203ENST00000570385 LLGL2Q6P1M3 1020 aa9.73□□□□□ -0.85
CTDNEP1-203ENST00000570385 LRRC55Q6ZSA7 311 aa9.73□□□□□ -0.85
CTDNEP1-203ENST00000570385 ALYREFQ86V81 257 aaKnown RBP9.73□□□□□ -0.85
CTDNEP1-203ENST00000570385 SMAP1Q8IYB5 467 aaPredicted RBP9.73□□□□□ -0.85
CTDNEP1-203ENST00000570385 SMRP1Q8NCR6 262 aa9.73□□□□□ -0.85
CTDNEP1-203ENST00000570385 KCNB2Q92953 911 aa9.73□□□□□ -0.85
CTDNEP1-203ENST00000570385 RPGRIP1Q96KN7 1286 aa9.73□□□□□ -0.85
CTDNEP1-203ENST00000570385 MAP7D2Q96T17 732 aa9.73□□□□□ -0.85
CTDNEP1-203ENST00000570385 POP1Q99575 1024 aaKnown RBP9.73□□□□□ -0.85
CTDNEP1-203ENST00000570385 ADAMTS10Q9H324 1103 aa9.73□□□□□ -0.85
CTDNEP1-203ENST00000570385 UNC45AQ9H3U1 944 aa9.73□□□□□ -0.85
CTDNEP1-203ENST00000570385 CWH43Q9H720 699 aa9.73□□□□□ -0.85
CTDNEP1-203ENST00000570385 AAASQ9NRG9 546 aa9.73□□□□□ -0.85
CTDNEP1-203ENST00000570385 RNF19AQ9NV58 838 aa9.73□□□□□ -0.85
CTDNEP1-203ENST00000570385 TMEM161AQ9NX61 479 aa9.73□□□□□ -0.85
CTDNEP1-203ENST00000570385 CEP131Q9UPN4 1083 aa9.73□□□□□ -0.85
CTDNEP1-203ENST00000570385 ARIH1Q9Y4X5 557 aaPredicted RBP9.73□□□□□ -0.85
CTDNEP1-203ENST00000570385 ZNF318Q5VUA4 2279 aa9.73□□□□□ -0.85
CTDNEP1-203ENST00000570385 MAGEB2O15479 319 aa9.72□□□□□ -0.85
CTDNEP1-203ENST00000570385 GAS7O60861 476 aa9.72□□□□□ -0.85
CTDNEP1-203ENST00000570385 TDP2O95551 362 aa9.72□□□□□ -0.85
CTDNEP1-203ENST00000570385 EYA4O95677 639 aa9.72□□□□□ -0.85
CTDNEP1-203ENST00000570385 ZSCAN20P17040 1043 aaPredicted RBP9.72□□□□□ -0.85
CTDNEP1-203ENST00000570385 SP100P23497 879 aaPredicted RBP9.72□□□□□ -0.85
CTDNEP1-203ENST00000570385 TMOD1P28289 359 aa9.72□□□□□ -0.85
CTDNEP1-203ENST00000570385 FAM189BP81408 668 aa9.72□□□□□ -0.85
CTDNEP1-203ENST00000570385 COASYQ13057 564 aa9.72□□□□□ -0.85
CTDNEP1-203ENST00000570385 DRP2Q13474 957 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms