RNA–Protein interactions for RNA: ENST00000570195.5

CMC2-223, Transcript of C-X9-C motif containing 2, human

TSL 3 BASIC

Gene CMC2, Length 871 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC2-223	ENST00000570195	FAM160B1	Q5W0V3	765 aa		12.53	□□□□□ -0.4
CMC2-223	ENST00000570195	PDE12	Q6L8Q7	609 aa	Known RBP	12.53	□□□□□ -0.4
CMC2-223	ENST00000570195	PDXDC2P	Q6P474	469 aa		12.53	□□□□□ -0.4
CMC2-223	ENST00000570195	ABHD15	Q6UXT9	468 aa		12.53	□□□□□ -0.4
CMC2-223	ENST00000570195	TRMT1L	Q7Z2T5	733 aa	Known RBP	12.53	□□□□□ -0.4
CMC2-223	ENST00000570195	MRPS27	Q92552	414 aa	Known RBP	12.53	□□□□□ -0.4
CMC2-223	ENST00000570195	ATOH1	Q92858	354 aa	Predicted RBP	12.53	□□□□□ -0.4
CMC2-223	ENST00000570195	TCF25	Q9BQ70	676 aa		12.53	□□□□□ -0.4
CMC2-223	ENST00000570195	RIC8A	Q9NPQ8	531 aa		12.53	□□□□□ -0.4
CMC2-223	ENST00000570195	ZNF302	Q9NR11	478 aa		12.53	□□□□□ -0.4
CMC2-223	ENST00000570195	TMEM161A	Q9NX61	479 aa		12.53	□□□□□ -0.4
CMC2-223	ENST00000570195	PUF60	Q9UHX1	559 aa	Known RBP	12.53	□□□□□ -0.4
CMC2-223	ENST00000570195	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	12.52	□□□□□ -0.4
CMC2-223	ENST00000570195	ZBTB42	B2RXF5	422 aa		12.52	□□□□□ -0.41
CMC2-223	ENST00000570195		H0Y858	1186 aa		12.52	□□□□□ -0.41
CMC2-223	ENST00000570195	SLC27A2	O14975	620 aa		12.52	□□□□□ -0.41
CMC2-223	ENST00000570195	FOS	P01100	380 aa	Predicted RBP	12.52	□□□□□ -0.41
CMC2-223	ENST00000570195	VTN	P04004	478 aa		12.52	□□□□□ -0.41
CMC2-223	ENST00000570195	ATP4A	P20648	1035 aa		12.52	□□□□□ -0.41
CMC2-223	ENST00000570195	ADCY7	P51828	1080 aa		12.52	□□□□□ -0.41
CMC2-223	ENST00000570195	CRYBB1	P53674	252 aa	Predicted RBP	12.52	□□□□□ -0.41
CMC2-223	ENST00000570195	FAM189B	P81408	668 aa		12.52	□□□□□ -0.41
CMC2-223	ENST00000570195	PLCB3	Q01970	1234 aa		12.52	□□□□□ -0.41
CMC2-223	ENST00000570195	SWSAP1	Q6NVH7	229 aa		12.52	□□□□□ -0.41
CMC2-223	ENST00000570195	KCNT2	Q6UVM3	1135 aa		12.52	□□□□□ -0.41
CMC2-223	ENST00000570195	TMEM184A	Q6ZMB5	413 aa		12.52	□□□□□ -0.41
CMC2-223	ENST00000570195	CKAP2L	Q8IYA6	745 aa		12.52	□□□□□ -0.41
CMC2-223	ENST00000570195	METTL13	Q8N6R0	699 aa		12.52	□□□□□ -0.41
CMC2-223	ENST00000570195	TMEM117	Q9H0C3	514 aa		12.52	□□□□□ -0.41
CMC2-223	ENST00000570195	TSHZ2	Q9NRE2	1034 aa		12.52	□□□□□ -0.41
CMC2-223	ENST00000570195	LZTS1	Q9Y250	596 aa		12.52	□□□□□ -0.41
CMC2-223	ENST00000570195	CNTNAP5	Q8WYK1	1306 aa		12.52	□□□□□ -0.41
CMC2-223	ENST00000570195	COL1A2	P08123	1366 aa		12.52	□□□□□ -0.41
CMC2-223	ENST00000570195	SMCO2	A6NFE2	343 aa		12.51	□□□□□ -0.41
CMC2-223	ENST00000570195	C22orf31	O95567	290 aa		12.51	□□□□□ -0.41
CMC2-223	ENST00000570195	SREBF1	P36956	1147 aa		12.51	□□□□□ -0.41
CMC2-223	ENST00000570195	DSC3	Q14574	896 aa		12.51	□□□□□ -0.41
CMC2-223	ENST00000570195	PPP1R18	Q6NYC8	613 aa		12.51	□□□□□ -0.41
CMC2-223	ENST00000570195	MIS18BP1	Q6P0N0	1132 aa		12.51	□□□□□ -0.41
CMC2-223	ENST00000570195	LRRC55	Q6ZSA7	311 aa		12.51	□□□□□ -0.41
CMC2-223	ENST00000570195	TMC7	Q7Z402	723 aa		12.51	□□□□□ -0.41
CMC2-223	ENST00000570195	PLA2G4D	Q86XP0	818 aa		12.51	□□□□□ -0.41
CMC2-223	ENST00000570195	RNF169	Q8NCN4	708 aa		12.51	□□□□□ -0.41
CMC2-223	ENST00000570195	KREMEN2	Q8NCW0	462 aa		12.51	□□□□□ -0.41
CMC2-223	ENST00000570195	RASGRP4	Q8TDF6	673 aa		12.51	□□□□□ -0.41
CMC2-223	ENST00000570195	RIPOR3	Q96MK2	946 aa		12.51	□□□□□ -0.41
CMC2-223	ENST00000570195	YTHDC1	Q96MU7	727 aa	Known RBP	12.51	□□□□□ -0.41
CMC2-223	ENST00000570195	ZNF558	Q96NG5	402 aa		12.51	□□□□□ -0.41
CMC2-223	ENST00000570195	CASD1	Q96PB1	797 aa		12.51	□□□□□ -0.41
CMC2-223	ENST00000570195	LSG1	Q9H089	658 aa	Known RBP	12.51	□□□□□ -0.41
CMC2-223	ENST00000570195	ELAC1	Q9H777	363 aa	Known RBP	12.51	□□□□□ -0.41
CMC2-223	ENST00000570195	NGRN	Q9NPE2	291 aa	Known RBP	12.51	□□□□□ -0.41
CMC2-223	ENST00000570195	RNF19A	Q9NV58	838 aa		12.51	□□□□□ -0.41
CMC2-223	ENST00000570195	EVPL	Q92817	2033 aa		12.5	□□□□□ -0.41
CMC2-223	ENST00000570195	FAM86B1	E9PN63	330 aa		12.5	□□□□□ -0.41
CMC2-223	ENST00000570195	DHX15	O43143	795 aa	Known RBP	12.5	□□□□□ -0.41
CMC2-223	ENST00000570195	GPR32	O75388	356 aa		12.5	□□□□□ -0.41
CMC2-223	ENST00000570195	FAM86B2	P0C5J1	330 aa		12.5	□□□□□ -0.41
CMC2-223	ENST00000570195	CA8	P35219	290 aa		12.5	□□□□□ -0.41
CMC2-223	ENST00000570195	CLCN3	P51790	818 aa		12.5	□□□□□ -0.41
CMC2-223	ENST00000570195	AP3B2	Q13367	1082 aa		12.5	□□□□□ -0.41
CMC2-223	ENST00000570195	JAKMIP3	Q5VZ66	844 aa		12.5	□□□□□ -0.41
CMC2-223	ENST00000570195	CREB3L3	Q68CJ9	461 aa		12.5	□□□□□ -0.41
CMC2-223	ENST00000570195	SYNE3	Q6ZMZ3	975 aa		12.5	□□□□□ -0.41
CMC2-223	ENST00000570195	FAM43B	Q6ZT52	329 aa	Predicted RBP	12.5	□□□□□ -0.41
CMC2-223	ENST00000570195	SGMS1	Q86VZ5	419 aa		12.5	□□□□□ -0.41
CMC2-223	ENST00000570195	ABI1	Q8IZP0	508 aa		12.5	□□□□□ -0.41
CMC2-223	ENST00000570195	LRRC43	Q8N309	656 aa		12.5	□□□□□ -0.41
CMC2-223	ENST00000570195	CASP10	Q92851	521 aa		12.5	□□□□□ -0.41
CMC2-223	ENST00000570195	ZNF668	Q96K58	619 aa	Predicted RBP	12.5	□□□□□ -0.41
CMC2-223	ENST00000570195	IRF2BPL	Q9H1B7	796 aa		12.5	□□□□□ -0.41
CMC2-223	ENST00000570195	POMK	Q9H5K3	350 aa		12.5	□□□□□ -0.41
CMC2-223	ENST00000570195	HCFC2	Q9Y5Z7	792 aa		12.5	□□□□□ -0.41
CMC2-223	ENST00000570195		V9GY48	417 aa	Predicted RBP	12.5	□□□□□ -0.41
CMC2-223	ENST00000570195	C2CD4D	B7Z1M9	353 aa		12.49	□□□□□ -0.41
CMC2-223	ENST00000570195	HOXA2	O43364	376 aa		12.49	□□□□□ -0.41
CMC2-223	ENST00000570195	BRD1	O95696	1058 aa		12.49	□□□□□ -0.41
CMC2-223	ENST00000570195	WEE2	P0C1S8	567 aa		12.49	□□□□□ -0.41
CMC2-223	ENST00000570195	HOXB8	P17481	243 aa	Predicted RBP	12.49	□□□□□ -0.41
CMC2-223	ENST00000570195	PPM1A	P35813	382 aa		12.49	□□□□□ -0.41
CMC2-223	ENST00000570195	CLK2	P49760	499 aa	Known RBP	12.49	□□□□□ -0.41
CMC2-223	ENST00000570195	KRT17	Q04695	432 aa		12.49	□□□□□ -0.41
CMC2-223	ENST00000570195	FUT2	Q10981	343 aa		12.49	□□□□□ -0.41
CMC2-223	ENST00000570195	APOA5	Q6Q788	366 aa		12.49	□□□□□ -0.41
CMC2-223	ENST00000570195	NIPA1	Q7RTP0	329 aa		12.49	□□□□□ -0.41
CMC2-223	ENST00000570195	BBX	Q8WY36	941 aa	Predicted RBP	12.49	□□□□□ -0.41
CMC2-223	ENST00000570195	TCEANC2	Q96MN5	208 aa		12.49	□□□□□ -0.41
CMC2-223	ENST00000570195	SMOC2	Q9H3U7	446 aa		12.49	□□□□□ -0.41
CMC2-223	ENST00000570195	RBM28	Q9NW13	759 aa	Known RBP	12.49	□□□□□ -0.41
CMC2-223	ENST00000570195	SPG21	Q9NZD8	308 aa		12.49	□□□□□ -0.41
CMC2-223	ENST00000570195	AKT3	Q9Y243	479 aa		12.49	□□□□□ -0.41
CMC2-223	ENST00000570195	NR2E1	Q9Y466	385 aa		12.49	□□□□□ -0.41
CMC2-223	ENST00000570195	PTPRZ1	P23471	2315 aa	Predicted RBP	12.49	□□□□□ -0.41
CMC2-223	ENST00000570195	CFAP54	Q96N23	3096 aa		12.48	□□□□□ -0.41
CMC2-223	ENST00000570195	IGLV3-22	A0A075B6J6	115 aa		12.48	□□□□□ -0.41
CMC2-223	ENST00000570195	NT5C1B-RDH14	C9J2C7	533 aa		12.48	□□□□□ -0.41
CMC2-223	ENST00000570195	IPO5	O00410	1097 aa	Known RBP	12.48	□□□□□ -0.41
CMC2-223	ENST00000570195	GALR2	O43603	387 aa	Predicted RBP	12.48	□□□□□ -0.41
CMC2-223	ENST00000570195	ZSCAN20	P17040	1043 aa	Predicted RBP	12.48	□□□□□ -0.41
CMC2-223	ENST00000570195	NLRP11	P59045	1033 aa	Known RBP	12.48	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 86 ms