RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 ACSL6Q9UKU0 697 aa4.81□□□□□ -1.64
UBR1-211ENST00000569971 ZBTB21Q9ULJ3 1066 aa4.81□□□□□ -1.64
UBR1-211ENST00000569971 TELO2Q9Y4R8 837 aa4.81□□□□□ -1.64
UBR1-211ENST00000569971 RAPGEF2Q9Y4G8 1499 aa4.81□□□□□ -1.64
UBR1-211ENST00000569971 KLHL33A6NCF5 533 aa4.8□□□□□ -1.64
UBR1-211ENST00000569971 HGSO14964 777 aaPredicted RBP4.8□□□□□ -1.64
UBR1-211ENST00000569971 TPD52L2O43399 206 aaKnown RBP4.8□□□□□ -1.64
UBR1-211ENST00000569971 XPOTO43592 962 aaKnown RBP4.8□□□□□ -1.64
UBR1-211ENST00000569971 TADA3O75528 432 aa4.8□□□□□ -1.64
UBR1-211ENST00000569971 EFEMP2O95967 443 aa4.8□□□□□ -1.64
UBR1-211ENST00000569971 CYP17A1P05093 508 aa4.8□□□□□ -1.64
UBR1-211ENST00000569971 VIPR1P32241 457 aa4.8□□□□□ -1.64
UBR1-211ENST00000569971 RHBDL3P58872 404 aa4.8□□□□□ -1.64
UBR1-211ENST00000569971 TUSC3Q13454 348 aa4.8□□□□□ -1.64
UBR1-211ENST00000569971 RAB3GAP1Q15042 981 aa4.8□□□□□ -1.64
UBR1-211ENST00000569971 GFOD2Q3B7J2 385 aa4.8□□□□□ -1.64
UBR1-211ENST00000569971 FIGNQ5HY92 759 aa4.8□□□□□ -1.64
UBR1-211ENST00000569971 BTBD8Q5XKL5 378 aa4.8□□□□□ -1.64
UBR1-211ENST00000569971 CCSAPQ6IQ19 270 aaPredicted RBP4.8□□□□□ -1.64
UBR1-211ENST00000569971 CXorf57Q6NSI4 855 aaKnown RBP4.8□□□□□ -1.64
UBR1-211ENST00000569971 SLC4A10Q6U841 1118 aa4.8□□□□□ -1.64
UBR1-211ENST00000569971 FRMD7Q6ZUT3 714 aa4.8□□□□□ -1.64
UBR1-211ENST00000569971 KCTD1Q719H9 257 aa4.8□□□□□ -1.64
UBR1-211ENST00000569971 FRMD5Q7Z6J6 570 aa4.8□□□□□ -1.64
UBR1-211ENST00000569971 PRRT2Q7Z6L0 340 aaPredicted RBP4.8□□□□□ -1.64
UBR1-211ENST00000569971 RTF1Q92541 710 aaKnown RBP4.8□□□□□ -1.64
UBR1-211ENST00000569971 SMOC1Q9H4F8 434 aa4.8□□□□□ -1.64
UBR1-211ENST00000569971 CNTD2Q9H8S5 307 aa4.8□□□□□ -1.64
UBR1-211ENST00000569971 RIC8BQ9NVN3 520 aa4.8□□□□□ -1.64
UBR1-211ENST00000569971 GIT1Q9Y2X7 761 aa4.8□□□□□ -1.64
UBR1-211ENST00000569971 SIT1Q9Y3P8 196 aa4.8□□□□□ -1.64
UBR1-211ENST00000569971 MRFAP1Q9Y605 127 aa4.8□□□□□ -1.64
UBR1-211ENST00000569971 PRXQ9BXM0 1461 aa4.8□□□□□ -1.64
UBR1-211ENST00000569971 OTOL1A6NHN0 477 aaPredicted RBP4.79□□□□□ -1.64
UBR1-211ENST00000569971 TRIM75PA6NK02 468 aa4.79□□□□□ -1.64
UBR1-211ENST00000569971 VSTM5A8MXK1 200 aa4.79□□□□□ -1.64
UBR1-211ENST00000569971 KDM1AO60341 852 aa4.79□□□□□ -1.64
UBR1-211ENST00000569971 BUB1BO60566 1050 aaPredicted RBP4.79□□□□□ -1.64
UBR1-211ENST00000569971 C4BPAP04003 597 aaKnown RBP4.79□□□□□ -1.64
UBR1-211ENST00000569971 PTPN1P18031 435 aaKnown RBP4.79□□□□□ -1.64
UBR1-211ENST00000569971 CD40P25942 277 aa4.79□□□□□ -1.64
UBR1-211ENST00000569971 EPHA5P54756 1037 aa4.79□□□□□ -1.64
UBR1-211ENST00000569971 HTRA3P83110 453 aa4.79□□□□□ -1.64
UBR1-211ENST00000569971 EFEMP1Q12805 493 aa4.79□□□□□ -1.64
UBR1-211ENST00000569971 ACAP2Q15057 778 aa4.79□□□□□ -1.64
UBR1-211ENST00000569971 SPATS1Q496A3 300 aa4.79□□□□□ -1.64
UBR1-211ENST00000569971 EMC4Q5J8M3 183 aa4.79□□□□□ -1.64
UBR1-211ENST00000569971 TMEM240Q5SV17 173 aa4.79□□□□□ -1.64
UBR1-211ENST00000569971 CATSPEREQ5SY80 951 aa4.79□□□□□ -1.64
UBR1-211ENST00000569971 EFCAB2Q5VUJ9 269 aa4.79□□□□□ -1.64
UBR1-211ENST00000569971 BICRALQ6AI39 1079 aa4.79□□□□□ -1.64
UBR1-211ENST00000569971 KSR2Q6VAB6 950 aa4.79□□□□□ -1.64
UBR1-211ENST00000569971 AMOTL1Q8IY63 956 aa4.79□□□□□ -1.64
UBR1-211ENST00000569971 CMTR2Q8IYT2 770 aaKnown RBP4.79□□□□□ -1.64
UBR1-211ENST00000569971 LINC01356Q8N9X3 169 aa4.79□□□□□ -1.64
UBR1-211ENST00000569971 MZB1Q8WU39 189 aa4.79□□□□□ -1.64
UBR1-211ENST00000569971 CLEC4DQ8WXI8 215 aa4.79□□□□□ -1.64
UBR1-211ENST00000569971 HSPBAP1Q96EW2 488 aa4.79□□□□□ -1.64
UBR1-211ENST00000569971 C16orf92Q96LL3 132 aa4.79□□□□□ -1.64
UBR1-211ENST00000569971 LRGUKQ96M69 825 aa4.79□□□□□ -1.64
UBR1-211ENST00000569971 PSMD1Q99460 953 aa4.79□□□□□ -1.64
UBR1-211ENST00000569971 KRTAP17-1Q9BYP8 105 aa4.79□□□□□ -1.64
UBR1-211ENST00000569971 SEMA4AQ9H3S1 761 aa4.79□□□□□ -1.64
UBR1-211ENST00000569971 RXFP1Q9HBX9 757 aa4.79□□□□□ -1.64
UBR1-211ENST00000569971 OBP2AQ9NY56 170 aa4.79□□□□□ -1.64
UBR1-211ENST00000569971 ASH2LQ9UBL3 628 aa4.79□□□□□ -1.64
UBR1-211ENST00000569971 MSRAQ9UJ68 235 aa4.79□□□□□ -1.64
UBR1-211ENST00000569971 NUDT5Q9UKK9 219 aa4.79□□□□□ -1.64
UBR1-211ENST00000569971 PNMA8BQ9ULN7 279 aaPredicted RBP4.79□□□□□ -1.64
UBR1-211ENST00000569971 RIPOR2Q9Y4F9 1068 aa4.79□□□□□ -1.64
UBR1-211ENST00000569971 CC2D2AQ9P2K1 1620 aa4.79□□□□□ -1.64
UBR1-211ENST00000569971 TTBK1Q5TCY1 1321 aaPredicted RBP4.78□□□□□ -1.64
UBR1-211ENST00000569971 RASSF10A6NK89 507 aa4.78□□□□□ -1.64
UBR1-211ENST00000569971 ACOT7O00154 380 aa4.78□□□□□ -1.64
UBR1-211ENST00000569971 SGSM2O43147 1006 aa4.78□□□□□ -1.64
UBR1-211ENST00000569971 MAFKO60675 156 aa4.78□□□□□ -1.64
UBR1-211ENST00000569971 IL33O95760 270 aa4.78□□□□□ -1.64
UBR1-211ENST00000569971 GLI4P10075 376 aa4.78□□□□□ -1.64
UBR1-211ENST00000569971 EPHB3P54753 998 aa4.78□□□□□ -1.64
UBR1-211ENST00000569971 KRTAP10-2P60368 255 aa4.78□□□□□ -1.64
UBR1-211ENST00000569971 GRIN1Q05586 938 aa4.78□□□□□ -1.64
UBR1-211ENST00000569971 UBE4AQ14139 1066 aa4.78□□□□□ -1.64
UBR1-211ENST00000569971 HLTFQ14527 1009 aaKnown RBP eCLIP4.78□□□□□ -1.64
UBR1-211ENST00000569971 TARBP2Q15633 366 aaKnown RBP4.78□□□□□ -1.64
UBR1-211ENST00000569971 CT83Q5H943 113 aa4.78□□□□□ -1.64
UBR1-211ENST00000569971 CNKSR3Q6P9H4 555 aa4.78□□□□□ -1.64
UBR1-211ENST00000569971 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.78□□□□□ -1.64
UBR1-211ENST00000569971 DGKHQ86XP1 1220 aa4.78□□□□□ -1.64
UBR1-211ENST00000569971 FAM129CQ86XR2 697 aa4.78□□□□□ -1.64
UBR1-211ENST00000569971 ZZZ3Q8IYH5 903 aa4.78□□□□□ -1.64
UBR1-211ENST00000569971 JADE3Q92613 823 aa4.78□□□□□ -1.64
UBR1-211ENST00000569971 ANO3Q9BYT9 981 aa4.78□□□□□ -1.64
UBR1-211ENST00000569971 EPB41L4AQ9HCS5 686 aaPredicted RBP4.78□□□□□ -1.64
UBR1-211ENST00000569971 ANLNQ9NQW6 1124 aa4.78□□□□□ -1.64
UBR1-211ENST00000569971 CCM2LQ9NUG4 571 aaPredicted RBP4.78□□□□□ -1.64
UBR1-211ENST00000569971 MYOTQ9UBF9 498 aa4.78□□□□□ -1.64
UBR1-211ENST00000569971 PALD1Q9ULE6 856 aa4.78□□□□□ -1.64
UBR1-211ENST00000569971 NUB1Q9Y5A7 615 aa4.78□□□□□ -1.64
UBR1-211ENST00000569971 LOC102724159A0A0B4J2E5 919 aa4.77□□□□□ -1.65
UBR1-211ENST00000569971 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms