RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 R4GN57 208 aa9.93□□□□□ -0.82
SMG1-216ENST00000569122 NCOR2Q9Y618 2525 aa9.93□□□□□ -0.82
SMG1-216ENST00000569122 HBP1O60381 514 aa9.92□□□□□ -0.82
SMG1-216ENST00000569122 MGEA5O60502 916 aa9.92□□□□□ -0.82
SMG1-216ENST00000569122 ATP9AO75110 1047 aa9.92□□□□□ -0.82
SMG1-216ENST00000569122 FGFR1P11362 822 aa9.92□□□□□ -0.82
SMG1-216ENST00000569122 KLRC1P26715 233 aa9.92□□□□□ -0.82
SMG1-216ENST00000569122 LMNB2Q03252 620 aa9.92□□□□□ -0.82
SMG1-216ENST00000569122 NMIQ13287 307 aaPredicted RBP9.92□□□□□ -0.82
SMG1-216ENST00000569122 GRM4Q14833 912 aa9.92□□□□□ -0.82
SMG1-216ENST00000569122 SART3Q15020 963 aaKnown RBP9.92□□□□□ -0.82
SMG1-216ENST00000569122 PLCB4Q15147 1175 aa9.92□□□□□ -0.82
SMG1-216ENST00000569122 ST3GAL2Q16842 350 aa9.92□□□□□ -0.82
SMG1-216ENST00000569122 PHLDB3Q6NSJ2 640 aa9.92□□□□□ -0.82
SMG1-216ENST00000569122 C15orf39Q6ZRI6 1047 aa9.92□□□□□ -0.82
SMG1-216ENST00000569122 GPR149Q86SP6 731 aa9.92□□□□□ -0.82
SMG1-216ENST00000569122 C1orf210Q8IVY1 113 aa9.92□□□□□ -0.82
SMG1-216ENST00000569122 OTUD7AQ8TE49 926 aaPredicted RBP9.92□□□□□ -0.82
SMG1-216ENST00000569122 CASD1Q96PB1 797 aa9.92□□□□□ -0.82
SMG1-216ENST00000569122 JADE2Q9NQC1 790 aa9.92□□□□□ -0.82
SMG1-216ENST00000569122 SLC9A2Q9UBY0 812 aa9.92□□□□□ -0.82
SMG1-216ENST00000569122 SEC63Q9UGP8 760 aaKnown RBP9.92□□□□□ -0.82
SMG1-216ENST00000569122 RCAN3Q9UKA8 241 aa9.92□□□□□ -0.82
SMG1-216ENST00000569122 SIT1Q9Y3P8 196 aa9.92□□□□□ -0.82
SMG1-216ENST00000569122 ZNF292O60281 2723 aa9.92□□□□□ -0.82
SMG1-216ENST00000569122 DNAH14Q0VDD8 3507 aa9.91□□□□□ -0.82
SMG1-216ENST00000569122 TPRP12270 2363 aaKnown RBP9.91□□□□□ -0.82
SMG1-216ENST00000569122 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.91□□□□□ -0.82
SMG1-216ENST00000569122 SPDYE3A6NKU9 549 aa9.91□□□□□ -0.82
SMG1-216ENST00000569122 HIP1O00291 1037 aa9.91□□□□□ -0.82
SMG1-216ENST00000569122 SPTLC1O15269 473 aa9.91□□□□□ -0.82
SMG1-216ENST00000569122 WEE2P0C1S8 567 aa9.91□□□□□ -0.82
SMG1-216ENST00000569122 SP9P0CG40 484 aa9.91□□□□□ -0.82
SMG1-216ENST00000569122 PDE1AP54750 535 aa9.91□□□□□ -0.82
SMG1-216ENST00000569122 ZNF484Q5JVG2 852 aa9.91□□□□□ -0.82
SMG1-216ENST00000569122 VARS2Q5ST30 1063 aaKnown RBP9.91□□□□□ -0.82
SMG1-216ENST00000569122 ANKRD45Q5TZF3 282 aa9.91□□□□□ -0.82
SMG1-216ENST00000569122 FAM160B1Q5W0V3 765 aa9.91□□□□□ -0.82
SMG1-216ENST00000569122 USP17L6PQ6QN14 398 aa9.91□□□□□ -0.82
SMG1-216ENST00000569122 VPS52Q8N1B4 723 aa9.91□□□□□ -0.82
SMG1-216ENST00000569122 SLC39A11Q8N1S5 342 aa9.91□□□□□ -0.82
SMG1-216ENST00000569122 C12orf76Q8N812 135 aaPredicted RBP9.91□□□□□ -0.82
SMG1-216ENST00000569122 RRP36Q96EU6 259 aaKnown RBP9.91□□□□□ -0.82
SMG1-216ENST00000569122 SHDQ96IW2 340 aa9.91□□□□□ -0.82
SMG1-216ENST00000569122 RTKNQ9BST9 563 aa9.91□□□□□ -0.82
SMG1-216ENST00000569122 DSCC1Q9BVC3 393 aa9.91□□□□□ -0.82
SMG1-216ENST00000569122 EMILIN2Q9BXX0 1053 aa9.91□□□□□ -0.82
SMG1-216ENST00000569122 PSTPIP2Q9H939 334 aa9.91□□□□□ -0.82
SMG1-216ENST00000569122 NCDNQ9UBB6 729 aa9.91□□□□□ -0.82
SMG1-216ENST00000569122 CDV3Q9UKY7 258 aaKnown RBP9.91□□□□□ -0.82
SMG1-216ENST00000569122 TELO2Q9Y4R8 837 aa9.91□□□□□ -0.82
SMG1-216ENST00000569122 UBIAD1Q9Y5Z9 338 aa9.91□□□□□ -0.82
SMG1-216ENST00000569122 COL1A2P08123 1366 aa9.9□□□□□ -0.82
SMG1-216ENST00000569122 NFASCO94856 1347 aa9.9□□□□□ -0.82
SMG1-216ENST00000569122 SALL3Q9BXA9 1300 aa9.9□□□□□ -0.82
SMG1-216ENST00000569122 MEIS2O14770 477 aa9.9□□□□□ -0.82
SMG1-216ENST00000569122 CTSAP10619 480 aa9.9□□□□□ -0.82
SMG1-216ENST00000569122 SRFP11831 508 aa9.9□□□□□ -0.82
SMG1-216ENST00000569122 ITGB5P18084 799 aa9.9□□□□□ -0.82
SMG1-216ENST00000569122 SMARCA1P28370 1054 aa9.9□□□□□ -0.82
SMG1-216ENST00000569122 CACNB1Q02641 598 aaPredicted RBP9.9□□□□□ -0.82
SMG1-216ENST00000569122 SEC23AQ15436 765 aa9.9□□□□□ -0.82
SMG1-216ENST00000569122 LETM2Q2VYF4 491 aa9.9□□□□□ -0.82
SMG1-216ENST00000569122 ZNF528Q3MIS6 628 aa9.9□□□□□ -0.82
SMG1-216ENST00000569122 TMC5Q6UXY8 1006 aa9.9□□□□□ -0.82
SMG1-216ENST00000569122 LRRC55Q6ZSA7 311 aa9.9□□□□□ -0.82
SMG1-216ENST00000569122 CATIPQ7Z7H3 387 aa9.9□□□□□ -0.82
SMG1-216ENST00000569122 DDX53Q86TM3 631 aaKnown RBP9.9□□□□□ -0.82
SMG1-216ENST00000569122 TEX2Q8IWB9 1127 aa9.9□□□□□ -0.82
SMG1-216ENST00000569122 KIAA0319LQ8IZA0 1049 aa9.9□□□□□ -0.82
SMG1-216ENST00000569122 RIN2Q8WYP3 895 aaPredicted RBP9.9□□□□□ -0.82
SMG1-216ENST00000569122 RILPL2Q969X0 211 aa9.9□□□□□ -0.82
SMG1-216ENST00000569122 CHAMP1Q96JM3 812 aa9.9□□□□□ -0.82
SMG1-216ENST00000569122 LZTS2Q9BRK4 669 aa9.9□□□□□ -0.82
SMG1-216ENST00000569122 TBC1D17Q9HA65 648 aa9.9□□□□□ -0.82
SMG1-216ENST00000569122 DACT1Q9NYF0 836 aa9.9□□□□□ -0.82
SMG1-216ENST00000569122 CDH22Q9UJ99 828 aa9.9□□□□□ -0.82
SMG1-216ENST00000569122 WDR87Q6ZQQ6 2873 aa9.89□□□□□ -0.83
SMG1-216ENST00000569122 DMXL1Q9Y485 3027 aa9.89□□□□□ -0.83
SMG1-216ENST00000569122 CYTH3O43739 400 aa9.89□□□□□ -0.83
SMG1-216ENST00000569122 CFHP08603 1231 aa9.89□□□□□ -0.83
SMG1-216ENST00000569122 SKIP12755 728 aa9.89□□□□□ -0.83
SMG1-216ENST00000569122 SDSP20132 328 aa9.89□□□□□ -0.83
SMG1-216ENST00000569122 TMOD1P28289 359 aa9.89□□□□□ -0.83
SMG1-216ENST00000569122 KIF5BP33176 963 aa9.89□□□□□ -0.83
SMG1-216ENST00000569122 GNAQP50148 359 aa9.89□□□□□ -0.83
SMG1-216ENST00000569122 ATXN1P54253 815 aaKnown RBP9.89□□□□□ -0.83
SMG1-216ENST00000569122 BCAR1P56945 870 aa9.89□□□□□ -0.83
SMG1-216ENST00000569122 ACTR2P61160 394 aa9.89□□□□□ -0.83
SMG1-216ENST00000569122 DSC3Q14574 896 aa9.89□□□□□ -0.83
SMG1-216ENST00000569122 FAM228AQ86W67 206 aa9.89□□□□□ -0.83
SMG1-216ENST00000569122 ECHDC2Q86YB7 292 aa9.89□□□□□ -0.83
SMG1-216ENST00000569122 CMASQ8NFW8 434 aaPredicted RBP9.89□□□□□ -0.83
SMG1-216ENST00000569122 SLC22A17Q8WUG5 538 aa9.89□□□□□ -0.83
SMG1-216ENST00000569122 TRAPPC12Q8WVT3 735 aa9.89□□□□□ -0.83
SMG1-216ENST00000569122 ATRIPQ8WXE1 791 aa9.89□□□□□ -0.83
SMG1-216ENST00000569122 ZBTB10Q96DT7 871 aa9.89□□□□□ -0.83
SMG1-216ENST00000569122 PCYT2Q99447 389 aa9.89□□□□□ -0.83
SMG1-216ENST00000569122 MAP3K14Q99558 947 aa9.89□□□□□ -0.83
SMG1-216ENST00000569122 SPZ1Q9BXG8 430 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms