RNA–Protein interactions for RNA: ENST00000568983.5

FANCA-232, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-232ENST00000568983 ATG7O95352 703 aa13.7□□□□□ -0.22
FANCA-232ENST00000568983 VTNP04004 478 aa13.7□□□□□ -0.22
FANCA-232ENST00000568983 SREBF1P36956 1147 aa13.7□□□□□ -0.22
FANCA-232ENST00000568983 CRYBB1P53674 252 aaPredicted RBP13.7□□□□□ -0.22
FANCA-232ENST00000568983 ERVFC1P60507 584 aa13.7□□□□□ -0.22
FANCA-232ENST00000568983 COL9A3Q14050 684 aaPredicted RBP13.7□□□□□ -0.22
FANCA-232ENST00000568983 TYW1BQ6NUM6 668 aa13.7□□□□□ -0.22
FANCA-232ENST00000568983 ABHD15Q6UXT9 468 aa13.7□□□□□ -0.22
FANCA-232ENST00000568983 SGMS1Q86VZ5 419 aa13.7□□□□□ -0.22
FANCA-232ENST00000568983 TEX2Q8IWB9 1127 aa13.7□□□□□ -0.22
FANCA-232ENST00000568983 LRRC43Q8N309 656 aa13.7□□□□□ -0.22
FANCA-232ENST00000568983 RNF169Q8NCN4 708 aa13.7□□□□□ -0.22
FANCA-232ENST00000568983 VN1R2Q8NFZ6 395 aa13.7□□□□□ -0.22
FANCA-232ENST00000568983 MAP7D2Q96T17 732 aa13.7□□□□□ -0.22
FANCA-232ENST00000568983 ZNF577Q9BSK1 485 aa13.7□□□□□ -0.22
FANCA-232ENST00000568983 AKT3Q9Y243 479 aa13.7□□□□□ -0.22
FANCA-232ENST00000568983 SAMM50Q9Y512 469 aa13.7□□□□□ -0.22
FANCA-232ENST00000568983 V9GY48 417 aaPredicted RBP13.7□□□□□ -0.22
FANCA-232ENST00000568983 IGKV6D-21A0A0A0MT36 114 aa13.69□□□□□ -0.22
FANCA-232ENST00000568983 GOLGA8AA7E2F4 631 aa13.69□□□□□ -0.22
FANCA-232ENST00000568983 GOLGA8BA8MQT2 603 aa13.69□□□□□ -0.22
FANCA-232ENST00000568983 C9IYK1 514 aa13.69□□□□□ -0.22
FANCA-232ENST00000568983 IPO5O00410 1097 aaKnown RBP13.69□□□□□ -0.22
FANCA-232ENST00000568983 MEIS1O00470 390 aa13.69□□□□□ -0.22
FANCA-232ENST00000568983 C22orf31O95567 290 aa13.69□□□□□ -0.22
FANCA-232ENST00000568983 ZSCAN20P17040 1043 aaPredicted RBP13.69□□□□□ -0.22
FANCA-232ENST00000568983 PPM1AP35813 382 aa13.69□□□□□ -0.22
FANCA-232ENST00000568983 FGD1P98174 961 aa13.69□□□□□ -0.22
FANCA-232ENST00000568983 SETQ01105 290 aaPredicted RBP13.69□□□□□ -0.22
FANCA-232ENST00000568983 KRT17Q04695 432 aa13.69□□□□□ -0.22
FANCA-232ENST00000568983 PTPN21Q16825 1174 aa13.69□□□□□ -0.22
FANCA-232ENST00000568983 JAKMIP3Q5VZ66 844 aa13.69□□□□□ -0.22
FANCA-232ENST00000568983 ANKRD54Q6NXT1 300 aa13.69□□□□□ -0.22
FANCA-232ENST00000568983 NIPA1Q7RTP0 329 aa13.69□□□□□ -0.22
FANCA-232ENST00000568983 TMC7Q7Z402 723 aa13.69□□□□□ -0.22
FANCA-232ENST00000568983 FAM228AQ86W67 206 aa13.69□□□□□ -0.22
FANCA-232ENST00000568983 BBXQ8WY36 941 aaPredicted RBP13.69□□□□□ -0.22
FANCA-232ENST00000568983 MRPS27Q92552 414 aaKnown RBP13.69□□□□□ -0.22
FANCA-232ENST00000568983 ZNF558Q96NG5 402 aa13.69□□□□□ -0.22
FANCA-232ENST00000568983 ESYT1Q9BSJ8 1104 aa13.69□□□□□ -0.22
FANCA-232ENST00000568983 TMEM117Q9H0C3 514 aa13.69□□□□□ -0.22
FANCA-232ENST00000568983 FAM86C1Q9NVL1 165 aa13.69□□□□□ -0.22
FANCA-232ENST00000568983 BARHL2Q9NY43 387 aa13.69□□□□□ -0.22
FANCA-232ENST00000568983 CEP131Q9UPN4 1083 aa13.69□□□□□ -0.22
FANCA-232ENST00000568983 LZTS1Q9Y250 596 aa13.69□□□□□ -0.22
FANCA-232ENST00000568983 NR2E1Q9Y466 385 aa13.69□□□□□ -0.22
FANCA-232ENST00000568983 EVPLQ92817 2033 aa13.68□□□□□ -0.22
FANCA-232ENST00000568983 FAM86B1E9PN63 330 aa13.68□□□□□ -0.22
FANCA-232ENST00000568983 FSCN2O14926 492 aa13.68□□□□□ -0.22
FANCA-232ENST00000568983 PSAPP07602 524 aa13.68□□□□□ -0.22
FANCA-232ENST00000568983 FAM86B2P0C5J1 330 aa13.68□□□□□ -0.22
FANCA-232ENST00000568983 PBX3P40426 434 aa13.68□□□□□ -0.22
FANCA-232ENST00000568983 CLCN3P51790 818 aa13.68□□□□□ -0.22
FANCA-232ENST00000568983 IRX6P78412 446 aaPredicted RBP13.68□□□□□ -0.22
FANCA-232ENST00000568983 TMEM87AQ8NBN3 555 aa13.68□□□□□ -0.22
FANCA-232ENST00000568983 SUSD6Q92537 303 aa13.68□□□□□ -0.22
FANCA-232ENST00000568983 ATOH1Q92858 354 aaPredicted RBP13.68□□□□□ -0.22
FANCA-232ENST00000568983 TCEANC2Q96MN5 208 aa13.68□□□□□ -0.22
FANCA-232ENST00000568983 CWH43Q9H720 699 aa13.68□□□□□ -0.22
FANCA-232ENST00000568983 ELAC1Q9H777 363 aaKnown RBP13.68□□□□□ -0.22
FANCA-232ENST00000568983 NGRNQ9NPE2 291 aaKnown RBP13.68□□□□□ -0.22
FANCA-232ENST00000568983 TBC1D22BQ9NU19 505 aa13.68□□□□□ -0.22
FANCA-232ENST00000568983 KLF18A0A0U1RQI7 1052 aa13.67□□□□□ -0.22
FANCA-232ENST00000568983 HIDE1A8MVS5 230 aa13.67□□□□□ -0.22
FANCA-232ENST00000568983 ST18O60284 1047 aa13.67□□□□□ -0.22
FANCA-232ENST00000568983 TMOD1P28289 359 aa13.67□□□□□ -0.22
FANCA-232ENST00000568983 VCPP55072 806 aaKnown RBP13.67□□□□□ -0.22
FANCA-232ENST00000568983 NLRP11P59045 1033 aaKnown RBP13.67□□□□□ -0.22
FANCA-232ENST00000568983 PLCB3Q01970 1234 aa13.67□□□□□ -0.22
FANCA-232ENST00000568983 TCF15Q12870 199 aa13.67□□□□□ -0.22
FANCA-232ENST00000568983 NECTIN1Q15223 517 aa13.67□□□□□ -0.22
FANCA-232ENST00000568983 TPRNQ4KMQ1 711 aa13.67□□□□□ -0.22
FANCA-232ENST00000568983 CES5AQ6NT32 575 aa13.67□□□□□ -0.22
FANCA-232ENST00000568983 KCNT2Q6UVM3 1135 aa13.67□□□□□ -0.22
FANCA-232ENST00000568983 SMAP1Q8IYB5 467 aaPredicted RBP13.67□□□□□ -0.22
FANCA-232ENST00000568983 CASP10Q92851 521 aa13.67□□□□□ -0.22
FANCA-232ENST00000568983 IRF2BPLQ9H1B7 796 aa13.67□□□□□ -0.22
FANCA-232ENST00000568983 GABBR1Q9UBS5 961 aa13.67□□□□□ -0.22
FANCA-232ENST00000568983 MYH9P35579 1960 aaKnown RBP13.67□□□□□ -0.22
FANCA-232ENST00000568983 ZBTB42B2RXF5 422 aa13.66□□□□□ -0.22
FANCA-232ENST00000568983 GFRA3O60609 400 aa13.66□□□□□ -0.22
FANCA-232ENST00000568983 GPR32O75388 356 aa13.66□□□□□ -0.22
FANCA-232ENST00000568983 HOXB8P17481 243 aaPredicted RBP13.66□□□□□ -0.22
FANCA-232ENST00000568983 CLK2P49760 499 aaKnown RBP13.66□□□□□ -0.22
FANCA-232ENST00000568983 MTMR3Q13615 1198 aa13.66□□□□□ -0.22
FANCA-232ENST00000568983 SMC1AQ14683 1233 aaKnown RBP13.66□□□□□ -0.22
FANCA-232ENST00000568983 BMS1Q14692 1282 aaKnown RBP13.66□□□□□ -0.22
FANCA-232ENST00000568983 ZNF746Q6NUN9 644 aaPredicted RBP13.66□□□□□ -0.22
FANCA-232ENST00000568983 REXO1Q8N1G1 1221 aaKnown RBP13.66□□□□□ -0.22
FANCA-232ENST00000568983 LRRC71Q8N4P6 559 aa13.66□□□□□ -0.22
FANCA-232ENST00000568983 RASGRP4Q8TDF6 673 aa13.66□□□□□ -0.22
FANCA-232ENST00000568983 CCDC12Q8WUD4 166 aaPredicted RBP13.66□□□□□ -0.22
FANCA-232ENST00000568983 ASIC4Q96FT7 647 aa13.66□□□□□ -0.22
FANCA-232ENST00000568983 ZNF668Q96K58 619 aaPredicted RBP13.66□□□□□ -0.22
FANCA-232ENST00000568983 FAM167AQ96KS9 214 aa13.66□□□□□ -0.22
FANCA-232ENST00000568983 CASD1Q96PB1 797 aa13.66□□□□□ -0.22
FANCA-232ENST00000568983 C6orf50Q9HD87 102 aa13.66□□□□□ -0.22
FANCA-232ENST00000568983 SPG21Q9NZD8 308 aa13.66□□□□□ -0.22
FANCA-232ENST00000568983 BRPF3Q9ULD4 1205 aa13.66□□□□□ -0.22
FANCA-232ENST00000568983 PCDHA10Q9Y5I2 948 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms