RNA–Protein interactions for RNA: ENST00000568903.5

TNRC6A-215, Transcript of trinucleotide repeat containing 6A, human

TSL 2

Gene TNRC6A, Length 943 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TNRC6A-215	ENST00000568903	PABPC5	Q96DU9	382 aa	Known RBP	11.17	□□□□□ -0.62
TNRC6A-215	ENST00000568903	SAMD11	Q96NU1	681 aa		11.17	□□□□□ -0.62
TNRC6A-215	ENST00000568903	NSUN3	Q9H649	340 aa	Known RBP	11.17	□□□□□ -0.62
TNRC6A-215	ENST00000568903	NAP1L2	Q9ULW6	460 aa	Predicted RBP	11.17	□□□□□ -0.62
TNRC6A-215	ENST00000568903	GINS2	Q9Y248	185 aa		11.17	□□□□□ -0.62
TNRC6A-215	ENST00000568903	PCDHA2	Q9Y5H9	948 aa		11.17	□□□□□ -0.62
TNRC6A-215	ENST00000568903	WDFY4	Q6ZS81	3184 aa		11.17	□□□□□ -0.62
TNRC6A-215	ENST00000568903	KAT6A	Q92794	2004 aa		11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	NFASC	O94856	1347 aa		11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	IGLV3-22	A0A075B6J6	115 aa		11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	IGKV6D-21	A0A0A0MT36	114 aa		11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	FAM205C	A6NFA0	338 aa		11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	ZBTB42	B2RXF5	422 aa		11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	C5orf67	F2Z3F1	127 aa		11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	MAFG	O15525	162 aa		11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	EDIL3	O43854	480 aa		11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	KLRC1	P26715	233 aa		11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	SREBF1	P36956	1147 aa		11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	PLA2G5	P39877	138 aa		11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	GCGR	P47871	477 aa		11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	CTC1	Q2NKJ3	1217 aa		11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	TMEM259	Q4ZIN3	620 aa		11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	TIGD5	Q53EQ6	642 aa		11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	BMP2KL	Q5H9B9	411 aa		11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	ABHD15	Q6UXT9	468 aa		11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	SYNE3	Q6ZMZ3	975 aa		11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	PLPPR4	Q7Z2D5	763 aa		11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	ADGRD2	Q7Z7M1	963 aa		11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	RSPH3	Q86UC2	560 aa		11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	KIAA0319L	Q8IZA0	1049 aa		11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	RASGRP4	Q8TDF6	673 aa		11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	CRYGN	Q8WXF5	182 aa		11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	CLP1	Q92989	425 aa	Known RBP	11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	SDF4	Q9BRK5	362 aa		11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	CELF4	Q9BZC1	486 aa	Known RBP	11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	AZI2	Q9H6S1	392 aa		11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	RBM28	Q9NW13	759 aa	Known RBP	11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	BARHL2	Q9NY43	387 aa		11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	PLAGL2	Q9UPG8	496 aa		11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	NOC2L	Q9Y3T9	749 aa	Known RBP	11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	TRPV2	Q9Y5S1	764 aa		11.16	□□□□□ -0.62
TNRC6A-215	ENST00000568903	IGSF9B	Q9UPX0	1349 aa		11.15	□□□□□ -0.62
TNRC6A-215	ENST00000568903	TTC3	P53804	2025 aa		11.15	□□□□□ -0.62
TNRC6A-215	ENST00000568903	RRN3P2	A6NIE6	340 aa		11.15	□□□□□ -0.62
TNRC6A-215	ENST00000568903	TK2	O00142	265 aa		11.15	□□□□□ -0.62
TNRC6A-215	ENST00000568903	GPR37L1	O60883	481 aa		11.15	□□□□□ -0.62
TNRC6A-215	ENST00000568903	TBX10	O75333	385 aa		11.15	□□□□□ -0.62
TNRC6A-215	ENST00000568903	ITGB1	P05556	798 aa		11.15	□□□□□ -0.62
TNRC6A-215	ENST00000568903	ZNF76	P36508	570 aa		11.15	□□□□□ -0.62
TNRC6A-215	ENST00000568903	RBM10	P98175	930 aa	Known RBP	11.15	□□□□□ -0.62
TNRC6A-215	ENST00000568903	NFX1	Q12986	1120 aa	Known RBP	11.15	□□□□□ -0.62
TNRC6A-215	ENST00000568903	PKN1	Q16512	942 aa		11.15	□□□□□ -0.62
TNRC6A-215	ENST00000568903	TSGA10IP	Q3SY00	556 aa		11.15	□□□□□ -0.62
TNRC6A-215	ENST00000568903	FAM102B	Q5T8I3	360 aa		11.15	□□□□□ -0.62
TNRC6A-215	ENST00000568903	IER5	Q5VY09	327 aa		11.15	□□□□□ -0.62
TNRC6A-215	ENST00000568903	SWSAP1	Q6NVH7	229 aa		11.15	□□□□□ -0.62
TNRC6A-215	ENST00000568903		Q6ZUG5	572 aa		11.15	□□□□□ -0.62
TNRC6A-215	ENST00000568903	PLA2G4D	Q86XP0	818 aa		11.15	□□□□□ -0.62
TNRC6A-215	ENST00000568903	SPPL3	Q8TCT6	385 aa		11.15	□□□□□ -0.62
TNRC6A-215	ENST00000568903	PHKB	Q93100	1093 aa		11.15	□□□□□ -0.62
TNRC6A-215	ENST00000568903	GJA10	Q969M2	543 aa		11.15	□□□□□ -0.62
TNRC6A-215	ENST00000568903	ZNF668	Q96K58	619 aa	Predicted RBP	11.15	□□□□□ -0.62
TNRC6A-215	ENST00000568903	LOXHD1	Q8IVV2	1947 aa		11.15	□□□□□ -0.62
TNRC6A-215	ENST00000568903	SMIM35	A0A1B0GVV1	85 aa		11.14	□□□□□ -0.63
TNRC6A-215	ENST00000568903	BACH1	O14867	736 aa		11.14	□□□□□ -0.63
TNRC6A-215	ENST00000568903	DTNB	O60941	627 aa		11.14	□□□□□ -0.63
TNRC6A-215	ENST00000568903	RB1	P06400	928 aa		11.14	□□□□□ -0.63
TNRC6A-215	ENST00000568903	KRT76	Q01546	638 aa		11.14	□□□□□ -0.63
TNRC6A-215	ENST00000568903	ZP2	Q05996	745 aa		11.14	□□□□□ -0.63
TNRC6A-215	ENST00000568903	PAK2	Q13177	524 aa		11.14	□□□□□ -0.63
TNRC6A-215	ENST00000568903	PFKFB3	Q16875	520 aa	Predicted RBP	11.14	□□□□□ -0.63
TNRC6A-215	ENST00000568903	RNF20	Q5VTR2	975 aa		11.14	□□□□□ -0.63
TNRC6A-215	ENST00000568903	RBM23	Q86U06	439 aa	Known RBP	11.14	□□□□□ -0.63
TNRC6A-215	ENST00000568903	KLHL23	Q8NBE8	558 aa		11.14	□□□□□ -0.63
TNRC6A-215	ENST00000568903	FAM122A	Q96E09	287 aa		11.14	□□□□□ -0.63
TNRC6A-215	ENST00000568903	C11orf84	Q9BUA3	381 aa	Predicted RBP	11.14	□□□□□ -0.63
TNRC6A-215	ENST00000568903	ERVK-5	Q9HDB9	667 aa		11.14	□□□□□ -0.63
TNRC6A-215	ENST00000568903	RALGAPA2	Q2PPJ7	1873 aa		11.13	□□□□□ -0.63
TNRC6A-215	ENST00000568903	IPO5	O00410	1097 aa	Known RBP	11.13	□□□□□ -0.63
TNRC6A-215	ENST00000568903	FOS	P01100	380 aa	Predicted RBP	11.13	□□□□□ -0.63
TNRC6A-215	ENST00000568903	VTN	P04004	478 aa		11.13	□□□□□ -0.63
TNRC6A-215	ENST00000568903	SCG2	P13521	617 aa		11.13	□□□□□ -0.63
TNRC6A-215	ENST00000568903	KIZ	Q2M2Z5	673 aa		11.13	□□□□□ -0.63
TNRC6A-215	ENST00000568903	PPP1R18	Q6NYC8	613 aa		11.13	□□□□□ -0.63
TNRC6A-215	ENST00000568903	PDXDC2P	Q6P474	469 aa		11.13	□□□□□ -0.63
TNRC6A-215	ENST00000568903	NPAS4	Q8IUM7	802 aa		11.13	□□□□□ -0.63
TNRC6A-215	ENST00000568903	ATP8B4	Q8TF62	1192 aa		11.13	□□□□□ -0.63
TNRC6A-215	ENST00000568903	BRF1	Q92994	677 aa		11.13	□□□□□ -0.63
TNRC6A-215	ENST00000568903	JAKMIP1	Q96N16	626 aa	Known RBP	11.13	□□□□□ -0.63
TNRC6A-215	ENST00000568903	OSMR	Q99650	979 aa		11.13	□□□□□ -0.63
TNRC6A-215	ENST00000568903	NCOA5	Q9HCD5	579 aa	Known RBP	11.13	□□□□□ -0.63
TNRC6A-215	ENST00000568903	ZNF302	Q9NR11	478 aa		11.13	□□□□□ -0.63
TNRC6A-215	ENST00000568903	CLEC1B	Q9P126	229 aa		11.13	□□□□□ -0.63
TNRC6A-215	ENST00000568903	ST3GAL5	Q9UNP4	418 aa		11.13	□□□□□ -0.63
TNRC6A-215	ENST00000568903	SNX14	Q9Y5W7	946 aa		11.13	□□□□□ -0.63
TNRC6A-215	ENST00000568903	KIAA1671	Q9BY89	1806 aa		11.13	□□□□□ -0.63
TNRC6A-215	ENST00000568903	PER2	O15055	1255 aa		11.12	□□□□□ -0.63
TNRC6A-215	ENST00000568903	HOXA2	O43364	376 aa		11.12	□□□□□ -0.63
TNRC6A-215	ENST00000568903	MBTPS2	O43462	519 aa		11.12	□□□□□ -0.63
TNRC6A-215	ENST00000568903	CDC45	O75419	566 aa		11.12	□□□□□ -0.63

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