RNA–Protein interactions for RNA: ENST00000568883.5

PKM-222, Transcript of pyruvate kinase M1/2, human

TSL 5 BASIC

Gene PKM, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-222	ENST00000568883	LRRC57	Q8N9N7	239 aa		13.82	□□□□□ -0.2
PKM-222	ENST00000568883	DYDC2	Q96IM9	177 aa		13.82	□□□□□ -0.2
PKM-222	ENST00000568883	TEKT3	Q9BXF9	490 aa		13.82	□□□□□ -0.2
PKM-222	ENST00000568883	CAPS2	Q9BXY5	557 aa		13.82	□□□□□ -0.2
PKM-222	ENST00000568883	STK33	Q9BYT3	514 aa		13.82	□□□□□ -0.2
PKM-222	ENST00000568883	RANBP17	Q9H2T7	1088 aa	Known RBP	13.82	□□□□□ -0.2
PKM-222	ENST00000568883	SIX2	Q9NPC8	291 aa		13.82	□□□□□ -0.2
PKM-222	ENST00000568883	RGL1	Q9NZL6	768 aa		13.82	□□□□□ -0.2
PKM-222	ENST00000568883	SUCLA2	Q9P2R7	463 aa	Predicted RBP	13.82	□□□□□ -0.2
PKM-222	ENST00000568883	TMEM59L	Q9UK28	342 aa		13.82	□□□□□ -0.2
PKM-222	ENST00000568883	NENF	Q9UMX5	172 aa		13.82	□□□□□ -0.2
PKM-222	ENST00000568883	DIS3	Q9Y2L1	958 aa	Known RBP	13.82	□□□□□ -0.2
PKM-222	ENST00000568883	RRP15	Q9Y3B9	282 aa	Known RBP	13.82	□□□□□ -0.2
PKM-222	ENST00000568883	COL11A2	P13942	1736 aa	Predicted RBP	13.82	□□□□□ -0.2
PKM-222	ENST00000568883	CLIC2	O15247	247 aa		13.81	□□□□□ -0.2
PKM-222	ENST00000568883	TGFB1I1	O43294	461 aa		13.81	□□□□□ -0.2
PKM-222	ENST00000568883	GLI1	P08151	1106 aa		13.81	□□□□□ -0.2
PKM-222	ENST00000568883	VIL1	P09327	827 aa	Known RBP	13.81	□□□□□ -0.2
PKM-222	ENST00000568883	SOX5	P35711	763 aa		13.81	□□□□□ -0.2
PKM-222	ENST00000568883	DNA2	P51530	1060 aa		13.81	□□□□□ -0.2
PKM-222	ENST00000568883	TNIP1	Q15025	636 aa		13.81	□□□□□ -0.2
PKM-222	ENST00000568883	CD302	Q8IX05	232 aa		13.81	□□□□□ -0.2
PKM-222	ENST00000568883	C1orf131	Q8NDD1	294 aa	Known RBP	13.81	□□□□□ -0.2
PKM-222	ENST00000568883	TPCN2	Q8NHX9	752 aa		13.81	□□□□□ -0.2
PKM-222	ENST00000568883	IFT81	Q8WYA0	676 aa		13.81	□□□□□ -0.2
PKM-222	ENST00000568883	BORCS6	Q96GS4	357 aa		13.81	□□□□□ -0.2
PKM-222	ENST00000568883	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.81	□□□□□ -0.2	1e-12	■■■■□ 25
PKM-222	ENST00000568883	NFU1	Q9UMS0	254 aa		13.81	□□□□□ -0.2
PKM-222	ENST00000568883		A0A1W2PRG0	241 aa		13.8	□□□□□ -0.2
PKM-222	ENST00000568883	CEP104	O60308	925 aa		13.8	□□□□□ -0.2
PKM-222	ENST00000568883	GUCY2C	P25092	1073 aa		13.8	□□□□□ -0.2
PKM-222	ENST00000568883	FMO5	P49326	533 aa		13.8	□□□□□ -0.2
PKM-222	ENST00000568883	CASP4	P49662	377 aa		13.8	□□□□□ -0.2
PKM-222	ENST00000568883	CETN1	Q12798	172 aa		13.8	□□□□□ -0.2
PKM-222	ENST00000568883	PPP2R5E	Q16537	467 aa		13.8	□□□□□ -0.2
PKM-222	ENST00000568883	ZNF720	Q7Z2F6	126 aa		13.8	□□□□□ -0.2
PKM-222	ENST00000568883	SLFN11	Q7Z7L1	901 aa		13.8	□□□□□ -0.2
PKM-222	ENST00000568883	SPICE1	Q8N0Z3	855 aa		13.8	□□□□□ -0.2
PKM-222	ENST00000568883	CYP2W1	Q8TAV3	490 aa		13.8	□□□□□ -0.2
PKM-222	ENST00000568883	RBM46	Q8TBY0	533 aa	Known RBP	13.8	□□□□□ -0.2
PKM-222	ENST00000568883	PIGO	Q8TEQ8	1089 aa		13.8	□□□□□ -0.2
PKM-222	ENST00000568883	LRRC45	Q96CN5	670 aa		13.8	□□□□□ -0.2
PKM-222	ENST00000568883	RIT2	Q99578	217 aa		13.8	□□□□□ -0.2
PKM-222	ENST00000568883	ZNF577	Q9BSK1	485 aa		13.8	□□□□□ -0.2
PKM-222	ENST00000568883	WDR18	Q9BV38	432 aa		13.8	□□□□□ -0.2
PKM-222	ENST00000568883	ISCU	Q9H1K1	167 aa		13.8	□□□□□ -0.2
PKM-222	ENST00000568883	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.8	□□□□□ -0.2
PKM-222	ENST00000568883	ARHGEF35	A5YM69	484 aa		13.8	□□□□□ -0.2
PKM-222	ENST00000568883	GOLGA6L10	A6NI86	522 aa		13.8	□□□□□ -0.2
PKM-222	ENST00000568883	TMCO5B	A8MYB1	307 aa		13.8	□□□□□ -0.2
PKM-222	ENST00000568883	CHMP2A	O43633	222 aa		13.8	□□□□□ -0.2
PKM-222	ENST00000568883	CARS	P49589	748 aa	Known RBP	13.8	□□□□□ -0.2
PKM-222	ENST00000568883	SKOR1	P84550	965 aa		13.8	□□□□□ -0.2
PKM-222	ENST00000568883	AOC3	Q16853	763 aa		13.8	□□□□□ -0.2
PKM-222	ENST00000568883	DNAJC21	Q5F1R6	531 aa	Known RBP	13.8	□□□□□ -0.2
PKM-222	ENST00000568883	SLC9A9	Q8IVB4	645 aa		13.8	□□□□□ -0.2
PKM-222	ENST00000568883	CCDC26	Q8TAB7	109 aa		13.8	□□□□□ -0.2
PKM-222	ENST00000568883	SCFD2	Q8WU76	684 aa		13.8	□□□□□ -0.2
PKM-222	ENST00000568883	FAM151A	Q8WW52	585 aa		13.8	□□□□□ -0.2
PKM-222	ENST00000568883	ZBTB9	Q96C00	473 aa		13.8	□□□□□ -0.2
PKM-222	ENST00000568883	CCDC43	Q96MW1	224 aa	Known RBP	13.8	□□□□□ -0.2
PKM-222	ENST00000568883	NAP1L3	Q99457	506 aa	Predicted RBP	13.8	□□□□□ -0.2
PKM-222	ENST00000568883	SLITRK6	Q9H5Y7	841 aa		13.8	□□□□□ -0.2
PKM-222	ENST00000568883	FEM1B	Q9UK73	627 aa		13.8	□□□□□ -0.2
PKM-222	ENST00000568883	PACSIN2	Q9UNF0	486 aa	Predicted RBP	13.8	□□□□□ -0.2
PKM-222	ENST00000568883	ZMYM2	Q9UBW7	1377 aa		13.8	□□□□□ -0.2
PKM-222	ENST00000568883	KIF13B	Q9NQT8	1826 aa		13.79	□□□□□ -0.2
PKM-222	ENST00000568883		F8VZ95	297 aa		13.79	□□□□□ -0.2
PKM-222	ENST00000568883	MYO1C	O00159	1063 aa		13.79	□□□□□ -0.2
PKM-222	ENST00000568883	TMEM253	P0C7T8	217 aa		13.79	□□□□□ -0.2
PKM-222	ENST00000568883	MAPT	P10636	758 aa	Known RBP	13.79	□□□□□ -0.2
PKM-222	ENST00000568883	KRT13	P13646	458 aa		13.79	□□□□□ -0.2
PKM-222	ENST00000568883	NMT1	P30419	496 aa	Known RBP	13.79	□□□□□ -0.2
PKM-222	ENST00000568883	ODR4	Q5SWX8	454 aa		13.79	□□□□□ -0.2
PKM-222	ENST00000568883	CCDC174	Q6PII3	467 aa		13.79	□□□□□ -0.2
PKM-222	ENST00000568883	LRIG3	Q6UXM1	1119 aa		13.79	□□□□□ -0.2
PKM-222	ENST00000568883	MAATS1	Q7Z4T9	603 aa		13.79	□□□□□ -0.2
PKM-222	ENST00000568883	SYCP3	Q8IZU3	236 aa		13.79	□□□□□ -0.2
PKM-222	ENST00000568883	TSEN2	Q8NCE0	465 aa	Known RBP	13.79	□□□□□ -0.2
PKM-222	ENST00000568883	U2AF1L4	Q8WU68	220 aa	Known RBP	13.79	□□□□□ -0.2
PKM-222	ENST00000568883	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	13.79	□□□□□ -0.2
PKM-222	ENST00000568883	RFFL	Q8WZ73	363 aa		13.79	□□□□□ -0.2
PKM-222	ENST00000568883	PRMT6	Q96LA8	375 aa	Predicted RBP	13.79	□□□□□ -0.2
PKM-222	ENST00000568883	ZIM3	Q96PE6	472 aa		13.79	□□□□□ -0.2
PKM-222	ENST00000568883	RASSF4	Q9H2L5	321 aa		13.79	□□□□□ -0.2
PKM-222	ENST00000568883	TMEM206	Q9H813	350 aa		13.79	□□□□□ -0.2
PKM-222	ENST00000568883	VCPKMT	Q9H867	229 aa		13.79	□□□□□ -0.2
PKM-222	ENST00000568883	AGPAT3	Q9NRZ7	376 aa		13.79	□□□□□ -0.2
PKM-222	ENST00000568883	DMAC2	Q9NW81	257 aa		13.79	□□□□□ -0.2
PKM-222	ENST00000568883	RSPH14	Q9UHP6	348 aa		13.79	□□□□□ -0.2
PKM-222	ENST00000568883	AMFR	Q9UKV5	643 aa		13.79	□□□□□ -0.2
PKM-222	ENST00000568883	ZBTB21	Q9ULJ3	1066 aa		13.79	□□□□□ -0.2
PKM-222	ENST00000568883	NCAN	O14594	1321 aa		13.79	□□□□□ -0.2
PKM-222	ENST00000568883	DDX3X	O00571	662 aa	Known RBP eCLIP	13.78	□□□□□ -0.2	1e-75	■■■□□ 14.7
PKM-222	ENST00000568883	RAD51C	O43502	376 aa		13.78	□□□□□ -0.2
PKM-222	ENST00000568883	EVI5	O60447	810 aa		13.78	□□□□□ -0.2
PKM-222	ENST00000568883	BCR	P11274	1271 aa		13.78	□□□□□ -0.2
PKM-222	ENST00000568883	HSPA9	P38646	679 aa	Known RBP	13.78	□□□□□ -0.2
PKM-222	ENST00000568883	IRAK1	P51617	712 aa		13.78	□□□□□ -0.2
PKM-222	ENST00000568883	IRX5	P78411	483 aa	Predicted RBP	13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms