RNA–Protein interactions for RNA: ENST00000568507.5

CCNDBP1-213, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-213ENST00000568507 NCK2O43639 380 aa16.86■□□□□ 0.29
CCNDBP1-213ENST00000568507 ZNF862O60290 1169 aa16.86■□□□□ 0.29
CCNDBP1-213ENST00000568507 PFKFB2O60825 505 aa16.86■□□□□ 0.29
CCNDBP1-213ENST00000568507 EIF5BO60841 1220 aaKnown RBP16.86■□□□□ 0.29
CCNDBP1-213ENST00000568507 PSMD10O75832 226 aa16.86■□□□□ 0.29
CCNDBP1-213ENST00000568507 LINC00271P0C7V0 271 aa16.86■□□□□ 0.29
CCNDBP1-213ENST00000568507 NLRP11P59045 1033 aaKnown RBP16.86■□□□□ 0.29
CCNDBP1-213ENST00000568507 ANAPC15P60006 121 aa16.86■□□□□ 0.29
CCNDBP1-213ENST00000568507 TBC1D8BQ0IIM8 1120 aa16.86■□□□□ 0.29
CCNDBP1-213ENST00000568507 INF2Q27J81 1249 aa16.86■□□□□ 0.29
CCNDBP1-213ENST00000568507 NAALADL2Q58DX5 795 aa16.86■□□□□ 0.29
CCNDBP1-213ENST00000568507 SPOUT1Q5T280 376 aaKnown RBP16.86■□□□□ 0.29
CCNDBP1-213ENST00000568507 MOXD1Q6UVY6 613 aa16.86■□□□□ 0.29
CCNDBP1-213ENST00000568507 SLC24A5Q71RS6 500 aa16.86■□□□□ 0.29
CCNDBP1-213ENST00000568507 CRIPAKQ8N1N5 446 aa16.86■□□□□ 0.29
CCNDBP1-213ENST00000568507 DDX25Q9UHL0 483 aaKnown RBP16.86■□□□□ 0.29
CCNDBP1-213ENST00000568507 TPCN1Q9ULQ1 816 aa16.86■□□□□ 0.29
CCNDBP1-213ENST00000568507 MGEA5O60502 916 aa16.85■□□□□ 0.29
CCNDBP1-213ENST00000568507 CSPG5O95196 566 aa16.85■□□□□ 0.29
CCNDBP1-213ENST00000568507 ZSCAN20P17040 1043 aaPredicted RBP16.85■□□□□ 0.29
CCNDBP1-213ENST00000568507 UGCGQ16739 394 aa16.85■□□□□ 0.29
CCNDBP1-213ENST00000568507 LETM2Q2VYF4 491 aa16.85■□□□□ 0.29
CCNDBP1-213ENST00000568507 PUS10Q3MIT2 529 aaKnown RBP16.85■□□□□ 0.29
CCNDBP1-213ENST00000568507 FAM228AQ86W67 206 aa16.85■□□□□ 0.29
CCNDBP1-213ENST00000568507 LRRC71Q8N4P6 559 aa16.85■□□□□ 0.29
CCNDBP1-213ENST00000568507 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.85■□□□□ 0.29
CCNDBP1-213ENST00000568507 P2RX5Q93086 422 aa16.85■□□□□ 0.29
CCNDBP1-213ENST00000568507 PABPC5Q96DU9 382 aaKnown RBP16.85■□□□□ 0.29
CCNDBP1-213ENST00000568507 SCLT1Q96NL6 688 aa16.85■□□□□ 0.29
CCNDBP1-213ENST00000568507 PHF20Q9BVI0 1012 aa16.85■□□□□ 0.29
CCNDBP1-213ENST00000568507 ATP6V0A4Q9HBG4 840 aa16.85■□□□□ 0.29
CCNDBP1-213ENST00000568507 ALG13Q9NP73 1137 aaKnown RBP16.85■□□□□ 0.29
CCNDBP1-213ENST00000568507 CLDND1Q9NY35 253 aa16.85■□□□□ 0.29
CCNDBP1-213ENST00000568507 PLAGL2Q9UPG8 496 aa16.85■□□□□ 0.29
CCNDBP1-213ENST00000568507 H3BQ06 376 aaPredicted RBP16.84■□□□□ 0.29
CCNDBP1-213ENST00000568507 GATMP50440 423 aa16.84■□□□□ 0.29
CCNDBP1-213ENST00000568507 NPY5RQ15761 445 aa16.84■□□□□ 0.29
CCNDBP1-213ENST00000568507 XKR3Q5GH77 459 aa16.84■□□□□ 0.29
CCNDBP1-213ENST00000568507 PTCRAQ6ISU1 281 aaPredicted RBP16.84■□□□□ 0.29
CCNDBP1-213ENST00000568507 WASF1Q92558 559 aa16.84■□□□□ 0.29
CCNDBP1-213ENST00000568507 PPP2R3CQ969Q6 453 aa16.84■□□□□ 0.29
CCNDBP1-213ENST00000568507 MBOAT7Q96N66 472 aa16.84■□□□□ 0.29
CCNDBP1-213ENST00000568507 AAASQ9NRG9 546 aa16.84■□□□□ 0.29
CCNDBP1-213ENST00000568507 SEPT9Q9UHD8 586 aaPredicted RBP16.84■□□□□ 0.29
CCNDBP1-213ENST00000568507 STK36Q9NRP7 1315 aa16.84■□□□□ 0.29
CCNDBP1-213ENST00000568507 BDP1A6H8Y1 2624 aa16.83■□□□□ 0.28
CCNDBP1-213ENST00000568507 TBKBP1A7MCY6 615 aa16.83■□□□□ 0.28
CCNDBP1-213ENST00000568507 DDX11L8A8MPP1 907 aa16.83■□□□□ 0.28
CCNDBP1-213ENST00000568507 C9IYK1 514 aa16.83■□□□□ 0.28
CCNDBP1-213ENST00000568507 MARCH6O60337 910 aa16.83■□□□□ 0.28
CCNDBP1-213ENST00000568507 MMP1P03956 469 aa16.83■□□□□ 0.28
CCNDBP1-213ENST00000568507 EIF4BP23588 611 aaKnown RBP16.83■□□□□ 0.28
CCNDBP1-213ENST00000568507 DNM2P50570 870 aa16.83■□□□□ 0.28
CCNDBP1-213ENST00000568507 MTERF2Q49AM1 385 aa16.83■□□□□ 0.28
CCNDBP1-213ENST00000568507 LINC01465Q8N7H1 131 aa16.83■□□□□ 0.28
CCNDBP1-213ENST00000568507 KLHL23Q8NBE8 558 aa16.83■□□□□ 0.28
CCNDBP1-213ENST00000568507 ETNPPLQ8TBG4 499 aa16.83■□□□□ 0.28
CCNDBP1-213ENST00000568507 NEK9Q8TD19 979 aa16.83■□□□□ 0.28
CCNDBP1-213ENST00000568507 NLRP7Q8WX94 980 aa16.83■□□□□ 0.28
CCNDBP1-213ENST00000568507 ADAMTS10Q9H324 1103 aa16.83■□□□□ 0.28
CCNDBP1-213ENST00000568507 IGFLR1Q9H665 355 aa16.83■□□□□ 0.28
CCNDBP1-213ENST00000568507 ORC3Q9UBD5 711 aaPredicted RBP16.83■□□□□ 0.28
CCNDBP1-213ENST00000568507 FAM50BQ9Y247 325 aa16.83■□□□□ 0.28
CCNDBP1-213ENST00000568507 PCDHB12Q9Y5F1 795 aa16.83■□□□□ 0.28
CCNDBP1-213ENST00000568507 TTC3P53804 2025 aa16.83■□□□□ 0.28
CCNDBP1-213ENST00000568507 TCF20Q9UGU0 1960 aaKnown RBP16.82■□□□□ 0.28
CCNDBP1-213ENST00000568507 ITGB1P05556 798 aa16.82■□□□□ 0.28
CCNDBP1-213ENST00000568507 GPC3P51654 580 aa16.82■□□□□ 0.28
CCNDBP1-213ENST00000568507 AK2P54819 239 aa16.82■□□□□ 0.28
CCNDBP1-213ENST00000568507 CDC42EP1Q00587 391 aa16.82■□□□□ 0.28
CCNDBP1-213ENST00000568507 FAM102BQ5T8I3 360 aa16.82■□□□□ 0.28
CCNDBP1-213ENST00000568507 NEK8Q86SG6 692 aa16.82■□□□□ 0.28
CCNDBP1-213ENST00000568507 SPPL3Q8TCT6 385 aa16.82■□□□□ 0.28
CCNDBP1-213ENST00000568507 ZNF668Q96K58 619 aaPredicted RBP16.82■□□□□ 0.28
CCNDBP1-213ENST00000568507 NAP1L4Q99733 375 aaKnown RBP16.82■□□□□ 0.28
CCNDBP1-213ENST00000568507 C1QTNF1Q9BXJ1 281 aa16.82■□□□□ 0.28
CCNDBP1-213ENST00000568507 NIFKQ9BYG3 293 aaKnown RBP16.82■□□□□ 0.28
CCNDBP1-213ENST00000568507 ELAC1Q9H777 363 aaKnown RBP16.82■□□□□ 0.28
CCNDBP1-213ENST00000568507 TMEM161AQ9NX61 479 aa16.82■□□□□ 0.28
CCNDBP1-213ENST00000568507 GRXCR2A6NFK2 248 aa16.81■□□□□ 0.28
CCNDBP1-213ENST00000568507 SLC37A4O43826 429 aa16.81■□□□□ 0.28
CCNDBP1-213ENST00000568507 CCNT1O60563 726 aaKnown RBP16.81■□□□□ 0.28
CCNDBP1-213ENST00000568507 DKC1O60832 514 aaKnown RBP eCLIP16.81■□□□□ 0.28
CCNDBP1-213ENST00000568507 GCFC2P16383 781 aaKnown RBP16.81■□□□□ 0.28
CCNDBP1-213ENST00000568507 PSMC5P62195 406 aa16.81■□□□□ 0.28
CCNDBP1-213ENST00000568507 FAM189BP81408 668 aa16.81■□□□□ 0.28
CCNDBP1-213ENST00000568507 DSC3Q14574 896 aa16.81■□□□□ 0.28
CCNDBP1-213ENST00000568507 TARBP2Q15633 366 aaKnown RBP16.81■□□□□ 0.28
CCNDBP1-213ENST00000568507 PPP4R3AQ6IN85 833 aa16.81■□□□□ 0.28
CCNDBP1-213ENST00000568507 B3GNT9Q6UX72 402 aa16.81■□□□□ 0.28
CCNDBP1-213ENST00000568507 PIK3AP1Q6ZUJ8 805 aa16.81■□□□□ 0.28
CCNDBP1-213ENST00000568507 POF1BQ8WVV4 589 aa16.81■□□□□ 0.28
CCNDBP1-213ENST00000568507 FAM20AQ96MK3 541 aa16.81■□□□□ 0.28
CCNDBP1-213ENST00000568507 BRMS1Q9HCU9 246 aa16.81■□□□□ 0.28
CCNDBP1-213ENST00000568507 HOXA2O43364 376 aa16.8■□□□□ 0.28
CCNDBP1-213ENST00000568507 DTNBO60941 627 aa16.8■□□□□ 0.28
CCNDBP1-213ENST00000568507 DARSP14868 501 aaKnown RBP16.8■□□□□ 0.28
CCNDBP1-213ENST00000568507 IL9P15248 144 aa16.8■□□□□ 0.28
CCNDBP1-213ENST00000568507 HYAL1Q12794 435 aa16.8■□□□□ 0.28
CCNDBP1-213ENST00000568507 FAM178BQ8IXR5 827 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms