RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 FAM43BQ6ZT52 329 aaPredicted RBP5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 EP400NLQ6ZTU2 488 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 PLPPR4Q7Z2D5 763 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 TMCO2Q7Z6W1 182 aaPredicted RBP5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 RPAINQ86UA6 219 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 TRIM50Q86XT4 487 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 NME8Q8N427 588 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 FIBCD1Q8N539 461 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 BICD2Q8TD16 824 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 EPS8L1Q8TE68 723 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 GDPD5Q8WTR4 605 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 LRRN4Q8WUT4 740 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 DNAJB3Q8WWF6 145 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 KCNB2Q92953 911 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 WNT8BQ93098 351 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 TOP1MTQ969P6 601 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 FTHL17Q9BXU8 183 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 BCAS3Q9H6U6 928 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 SUGCTQ9HAC7 445 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 PRDM16Q9HAZ2 1276 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 KCNH7Q9NS40 1196 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 BARHL2Q9NY43 387 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 TUBE1Q9UJT0 475 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 LRFN2Q9ULH4 789 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 FAM50BQ9Y247 325 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 UBIAD1Q9Y5Z9 338 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 WDR81Q562E7 1941 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 RALGAPA2Q2PPJ7 1873 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 CDH23Q9H251 3354 aa5.3□□□□□ -1.56
HERPUD1-213ENST00000568358 EYSQ5T1H1 3165 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 NFASCO94856 1347 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 GSTTP1A0A1W2PQM5 241 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 LCHNA4D1U4 455 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 RCCD1A6NED2 376 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 EPOPA6NHQ4 379 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 DDX39AO00148 427 aaKnown RBP5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 HBP1O60381 514 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 CLSTN1O94985 981 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 CHRNA1P02708 482 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 RB1P06400 928 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 NEFLP07196 543 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 STAG3L1P0CL83 205 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 GHRP10912 638 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 BMP1P13497 986 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 SCG2P13521 617 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 INSRRP14616 1297 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 ACTR2P61160 394 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 ADAM17P78536 824 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 MRPS6P82932 125 aaKnown RBP5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 HTRA4P83105 476 aaPredicted RBP5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 TFF2Q03403 129 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 GPM6BQ13491 265 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 MBTPS1Q14703 1052 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 PFKFB3Q16875 520 aaPredicted RBP5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 PUS10Q3MIT2 529 aaKnown RBP5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 EPC2Q52LR7 807 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 TIGD5Q53EQ6 642 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 JAKMIP3Q5VZ66 844 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 KRT40Q6A162 431 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 WWC2Q6AWC2 1192 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 TRAF7Q6Q0C0 670 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 TSHZ1Q6ZSZ6 1077 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 Q6ZUG5 572 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 NIPA1Q7RTP0 329 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 PLA2G4DQ86XP0 818 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 TMEM192Q8IY95 271 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 CKAP2LQ8IYA6 745 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 TRIM22Q8IYM9 498 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 RGL4Q8IZJ4 473 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 CCDC148Q8NFR7 591 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 PPP2R3CQ969Q6 453 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 MRPL38Q96DV4 380 aaKnown RBP5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 SPACA7Q96KW9 195 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 TCEANC2Q96MN5 208 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 JAKMIP1Q96N16 626 aaKnown RBP5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 C17orf80Q9BSJ5 609 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 ZNF577Q9BSK1 485 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 C11orf84Q9BUA3 381 aaPredicted RBP5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 C1QTNF1Q9BXJ1 281 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 ANO3Q9BYT9 981 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 TGIF2Q9GZN2 237 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 FAM49AQ9H0Q0 323 aaPredicted RBP5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 METTL5Q9NRN9 209 aaKnown RBP5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 TBC1D22BQ9NU19 505 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 DCTN4Q9UJW0 460 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 PCDHGC3Q9UN70 934 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 SAMM50Q9Y512 469 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 PCDHA2Q9Y5H9 948 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 CDY2AQ9Y6F7 541 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 SQORQ9Y6N5 450 aa5.29□□□□□ -1.56
HERPUD1-213ENST00000568358 MYO7AQ13402 2215 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 CNTNAP5Q8WYK1 1306 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 SMIM35A0A1B0GVV1 85 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 MBLAC1A4D2B0 266 aaPredicted RBP5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 H3BNC9 293 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 STXBP3O00186 592 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 IPO5O00410 1097 aaKnown RBP5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 MEIS1O00470 390 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 ENPP3O14638 875 aa5.28□□□□□ -1.56
HERPUD1-213ENST00000568358 CPLX1O14810 134 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms