RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 CEP131Q9UPN4 1083 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 SAMM50Q9Y512 469 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 TRPV2Q9Y5S1 764 aa5.41□□□□□ -1.54
CLK3-219ENST00000567805 PRRC2BQ5JSZ5 2229 aaKnown RBP5.41□□□□□ -1.54
CLK3-219ENST00000567805 TCF20Q9UGU0 1960 aaKnown RBP5.4□□□□□ -1.54
CLK3-219ENST00000567805 CCDC194A0A1B0GVG4 234 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 ENPP3O14638 875 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 MAGEB2O15479 319 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 PSMD10O75832 226 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 TDP2O95551 362 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 C22orf31O95567 290 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 OATP04181 439 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 TMOD1P28289 359 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 CD52P31358 61 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 NEK4P51957 841 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 JAK3P52333 1124 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 MRPS5P82675 430 aaKnown RBP5.4□□□□□ -1.54
CLK3-219ENST00000567805 TMEM62Q0P6H9 643 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 PAK2Q13177 524 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 SKIV2LQ15477 1246 aaKnown RBP5.4□□□□□ -1.54
CLK3-219ENST00000567805 AAK1Q2M2I8 961 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 EPC2Q52LR7 807 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 ODR4Q5SWX8 454 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 SPRED2Q7Z698 418 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 KIAA0319LQ8IZA0 1049 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 FBXO22Q8NEZ5 403 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 ETNPPLQ8TBG4 499 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 GDPD5Q8WTR4 605 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 WASF1Q92558 559 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 GTF3C6Q969F1 213 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 MBOAT7Q96N66 472 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 ASB2Q96Q27 587 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 NAP1L4Q99733 375 aaKnown RBP5.4□□□□□ -1.54
CLK3-219ENST00000567805 C17orf80Q9BSJ5 609 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 TEKT3Q9BXF9 490 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 AGO3Q9H9G7 860 aaKnown RBP5.4□□□□□ -1.54
CLK3-219ENST00000567805 RC3H2Q9HBD1 1191 aaKnown RBP5.4□□□□□ -1.54
CLK3-219ENST00000567805 PRDM6Q9NQX0 595 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 NRBP2Q9NSY0 501 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 ORC3Q9UBD5 711 aaPredicted RBP5.4□□□□□ -1.54
CLK3-219ENST00000567805 DDX25Q9UHL0 483 aaKnown RBP5.4□□□□□ -1.54
CLK3-219ENST00000567805 MTUS1Q9ULD2 1270 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 PADI3Q9ULW8 664 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 KCNJ14Q9UNX9 436 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 RWDD3Q9Y3V2 267 aa5.4□□□□□ -1.54
CLK3-219ENST00000567805 PLXNA4Q9HCM2 1894 aa5.4□□□□□ -1.55
CLK3-219ENST00000567805 ADGRA3Q8IWK6 1321 aa5.4□□□□□ -1.55
CLK3-219ENST00000567805 C5orf67F2Z3F1 127 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 H3BNC9 293 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 RBAK-RBAKDNI3L0D1 243 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 GPR182O15218 404 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 CHMP2AO43633 222 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 ZNF862O60290 1169 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 RPS6KA5O75582 802 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 DGKIO75912 1065 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 CTDNEP1O95476 244 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 RB1P06400 928 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 STAG3L1P0CL83 205 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 GCFC2P16383 781 aaKnown RBP5.39□□□□□ -1.55
CLK3-219ENST00000567805 KRT2P35908 639 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 CRYBB1P53674 252 aaPredicted RBP5.39□□□□□ -1.55
CLK3-219ENST00000567805 PRKCEQ02156 737 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 PPP2R5CQ13362 524 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 ME3Q16798 604 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 PTPROQ16827 1216 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 INF2Q27J81 1249 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 KIZQ2M2Z5 673 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 LETM2Q2VYF4 491 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 KRT40Q6A162 431 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 PPP4R3AQ6IN85 833 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 EFCAB12Q6NXP0 572 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 B3GNT9Q6UX72 402 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 TRMT1LQ7Z2T5 733 aaKnown RBP5.39□□□□□ -1.55
CLK3-219ENST00000567805 MIER3Q7Z3K6 550 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 NEK8Q86SG6 692 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 NPAS4Q8IUM7 802 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 TMEM192Q8IY95 271 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 CRIPAKQ8N1N5 446 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 FIBCD1Q8N539 461 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 METTL13Q8N6R0 699 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 NECAB1Q8N987 351 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 NSUN7Q8NE18 718 aaKnown RBP5.39□□□□□ -1.55
CLK3-219ENST00000567805 IL27Q8NEV9 243 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 KCNV2Q8TDN2 545 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 LINC01599Q8WXQ3 324 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 CLP1Q92989 425 aaKnown RBP5.39□□□□□ -1.55
CLK3-219ENST00000567805 ZNF689Q96CS4 500 aaPredicted RBP5.39□□□□□ -1.55
CLK3-219ENST00000567805 MRPL38Q96DV4 380 aaKnown RBP5.39□□□□□ -1.55
CLK3-219ENST00000567805 FAM20AQ96MK3 541 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 MAP7D2Q96T17 732 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 OSMRQ99650 979 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 TMX1Q9H3N1 280 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 UNC45AQ9H3U1 944 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 BRMS1Q9HCU9 246 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 ERVK-5Q9HDB9 667 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 KCNMB3Q9NPA1 279 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 RYDENQ9NUL5 291 aaKnown RBP5.39□□□□□ -1.55
CLK3-219ENST00000567805 COG5Q9UP83 839 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 AKT3Q9Y243 479 aa5.39□□□□□ -1.55
CLK3-219ENST00000567805 GINS2Q9Y248 185 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms