RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 AGBL2Q5U5Z8 902 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 KDM7AQ6ZMT4 941 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 TRAPPC11Q7Z392 1133 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 SGMS1Q86VZ5 419 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 DCLK2Q8N568 766 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 DMGDHQ9UI17 866 aaKnown RBP13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 RFX7Q2KHR2 1363 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 SKAP2O75563 359 aaPredicted RBP13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 KITP10721 976 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 NCAPHQ15003 741 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 GLYCTKQ8IVS8 523 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 ENAHQ8N8S7 591 aaPredicted RBP13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 DRC3Q9H069 523 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 BHMT2Q9H2M3 363 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 CPVLQ9H3G5 476 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 MRPL47Q9HD33 250 aaKnown RBP13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 ANAPC7Q9UJX3 599 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 METP08581 1390 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 COPEO14579 308 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 MGEA5O60502 916 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 PIK3CAP42336 1068 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 GPC5P78333 572 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 GRIN1Q05586 938 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 ART3Q13508 389 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 CDC37Q16543 378 aaPredicted RBP13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 GUF1Q8N442 669 aaKnown RBP13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 DNAJC9Q8WXX5 260 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 TEKT3Q9BXF9 490 aa13.3□□□□□ -0.28
CSPG4P13-202ENST00000567704 ZNF609O15014 1411 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 ZRANB2O95218 330 aaKnown RBP eCLIP13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 STMN1P16949 149 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 UBXN2AP68543 259 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 MKRN3Q13064 507 aaKnown RBP13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 WDR75Q8IWA0 830 aaKnown RBP13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 TRIM59Q8IWR1 403 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 CFAP36Q96G28 342 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 CALN1Q9BXU9 219 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 VCPKMTQ9H867 229 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 CLTCL1P53675 1640 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 LRRC7Q96NW7 1537 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 GOLGA8MH3BSY2 632 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 SNAP23O00161 211 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 IPO5O00410 1097 aaKnown RBP13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 PPP1R12AO14974 1030 aaPredicted RBP13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 HNRNPDLO14979 420 aaKnown RBP13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 MCF2LO15068 1137 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 KCNA3P22001 575 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 KIAA1755Q5JYT7 1200 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 SLFN13Q68D06 897 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 GRAMD4Q6IC98 578 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 SERPINI1Q99574 410 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 GINS2Q9Y248 185 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 ADGRB3O60242 1522 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 ANP32DO95626 131 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 PDHBP11177 359 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 HOXA7P31268 230 aaPredicted RBP13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 YWHAEP62258 255 aaKnown RBP13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 GTF2IP78347 998 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 ZNF746Q6NUN9 644 aaPredicted RBP13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 NLRX1Q86UT6 975 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 TTLL11Q8NHH1 800 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 ERP27Q96DN0 273 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 CCDC138Q96M89 665 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 ZMAT2Q96NC0 199 aaKnown RBP13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 TMOD4Q9NZQ9 345 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 CNOT8Q9UFF9 292 aaKnown RBP13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 FOSP01100 380 aaPredicted RBP13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 KLK7P49862 253 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 COASYQ13057 564 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 KCNB1Q14721 858 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 RAPH1Q70E73 1250 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 KCTD1Q719H9 257 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 CNPY4Q8N129 248 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 ADAM33Q9BZ11 813 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 EDEM3Q9BZQ6 932 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 PARVGQ9HBI0 331 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 BTG4Q9NY30 223 aa13.29□□□□□ -0.28
CSPG4P13-202ENST00000567704 E9PMD0 336 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 NVLO15381 856 aaKnown RBP13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 ECE1P42892 770 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 SCTRP47872 440 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 SLC18A3Q16572 532 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 LONRF1Q17RB8 773 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 ASPRV1Q53RT3 343 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 RINT1Q6NUQ1 792 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 DARS2Q6PI48 645 aaKnown RBP13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 PCGF5Q86SE9 256 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 TRIM50Q86XT4 487 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 PRPF38AQ8NAV1 312 aaKnown RBP13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 SLC26A7Q8TE54 656 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 C1orf54Q8WWF1 131 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 SDCCAG3Q96C92 435 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 DUSP10Q9Y6W6 482 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 PPRC1Q5VV67 1664 aaKnown RBP13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 POLR2MP0CAP2 368 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 PGM1P36871 562 aa13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 MRPS35P82673 323 aaKnown RBP13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 DMP1Q13316 513 aaPredicted RBP13.28□□□□□ -0.28
CSPG4P13-202ENST00000567704 DHX34Q14147 1143 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms