RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 SFI1A8K8P3 1242 aa25.53■■□□□ 1.68
LINC00543-201ENST00000567234 EIF3CLB5ME19 914 aaKnown RBP25.53■■□□□ 1.68
LINC00543-201ENST00000567234 NR3C1P04150 777 aa25.53■■□□□ 1.68
LINC00543-201ENST00000567234 MAPTP10636 758 aaKnown RBP25.53■■□□□ 1.68
LINC00543-201ENST00000567234 ZNF746Q6NUN9 644 aaPredicted RBP25.53■■□□□ 1.68
LINC00543-201ENST00000567234 EIF3CQ99613 913 aaKnown RBP25.53■■□□□ 1.68
LINC00543-201ENST00000567234 CYP39A1Q9NYL5 469 aa25.53■■□□□ 1.68
LINC00543-201ENST00000567234 PCDHB13Q9Y5F0 798 aa25.53■■□□□ 1.68
LINC00543-201ENST00000567234 TESPA1A2RU30 521 aaPredicted RBP25.52■■□□□ 1.68
LINC00543-201ENST00000567234 RPS6KA5O75582 802 aa25.52■■□□□ 1.68
LINC00543-201ENST00000567234 TBC1D8O95759 1140 aa25.52■■□□□ 1.68
LINC00543-201ENST00000567234 CHST13Q8NET6 341 aa25.52■■□□□ 1.68
LINC00543-201ENST00000567234 CNKSR2Q8WXI2 1034 aa25.52■■□□□ 1.68
LINC00543-201ENST00000567234 CDHR1Q96JP9 859 aa25.52■■□□□ 1.68
LINC00543-201ENST00000567234 NHEJ1Q9H9Q4 299 aaPredicted RBP25.52■■□□□ 1.68
LINC00543-201ENST00000567234 A0A0G2JMZ2 1700 aa25.52■■□□□ 1.68
LINC00543-201ENST00000567234 ATP9AO75110 1047 aa25.51■■□□□ 1.67
LINC00543-201ENST00000567234 NMT1P30419 496 aaKnown RBP25.51■■□□□ 1.67
LINC00543-201ENST00000567234 ARHGAP25P42331 645 aa25.51■■□□□ 1.67
LINC00543-201ENST00000567234 RARRES1P49788 294 aa25.51■■□□□ 1.67
LINC00543-201ENST00000567234 PSMC5P62195 406 aa25.51■■□□□ 1.67
LINC00543-201ENST00000567234 MAPK7Q13164 816 aa25.51■■□□□ 1.67
LINC00543-201ENST00000567234 ALCAMQ13740 583 aa25.51■■□□□ 1.67
LINC00543-201ENST00000567234 SMC1AQ14683 1233 aaKnown RBP25.51■■□□□ 1.67
LINC00543-201ENST00000567234 ODR4Q5SWX8 454 aa25.51■■□□□ 1.67
LINC00543-201ENST00000567234 HNRNPLLQ8WVV9 542 aaKnown RBP25.51■■□□□ 1.67
LINC00543-201ENST00000567234 BAP1Q92560 729 aa25.51■■□□□ 1.67
LINC00543-201ENST00000567234 HAUS4Q9H6D7 363 aa25.51■■□□□ 1.67
LINC00543-201ENST00000567234 A1CFQ9NQ94 594 aaKnown RBP25.51■■□□□ 1.67
LINC00543-201ENST00000567234 CEP72Q9P209 647 aa25.51■■□□□ 1.67
LINC00543-201ENST00000567234 REXO2Q9Y3B8 237 aaKnown RBP25.51■■□□□ 1.67
LINC00543-201ENST00000567234 CCDC151A5D8V7 595 aa25.51■■□□□ 1.67
LINC00543-201ENST00000567234 EPHB6O15197 1021 aa25.51■■□□□ 1.67
LINC00543-201ENST00000567234 TGFB1I1O43294 461 aa25.51■■□□□ 1.67
LINC00543-201ENST00000567234 URI1O94763 535 aaPredicted RBP25.51■■□□□ 1.67
LINC00543-201ENST00000567234 TUBBP07437 444 aa25.51■■□□□ 1.67
LINC00543-201ENST00000567234 EPB41P11171 864 aaKnown RBP25.51■■□□□ 1.67
LINC00543-201ENST00000567234 IREB2P48200 963 aaKnown RBP25.51■■□□□ 1.67
LINC00543-201ENST00000567234 TTLL12Q14166 644 aaPredicted RBP25.51■■□□□ 1.67
LINC00543-201ENST00000567234 ZSCAN26Q16670 478 aa25.51■■□□□ 1.67
LINC00543-201ENST00000567234 RSRC2Q7L4I2 434 aaKnown RBP25.51■■□□□ 1.67
LINC00543-201ENST00000567234 SYN2Q92777 582 aaPredicted RBP25.51■■□□□ 1.67
LINC00543-201ENST00000567234 CLMNQ96JQ2 1002 aa25.51■■□□□ 1.67
LINC00543-201ENST00000567234 PURBQ96QR8 312 aaKnown RBP25.51■■□□□ 1.67
LINC00543-201ENST00000567234 STRA6Q9BX79 667 aa25.51■■□□□ 1.67
LINC00543-201ENST00000567234 ANKEF1Q9NU02 776 aa25.51■■□□□ 1.67
LINC00543-201ENST00000567234 ZMYM2Q9UBW7 1377 aa25.5■■□□□ 1.67
LINC00543-201ENST00000567234 HIP1RO75146 1068 aa25.5■■□□□ 1.67
LINC00543-201ENST00000567234 IPO7O95373 1038 aaKnown RBP25.5■■□□□ 1.67
LINC00543-201ENST00000567234 NF2P35240 595 aa25.5■■□□□ 1.67
LINC00543-201ENST00000567234 KCNH2Q12809 1159 aa25.5■■□□□ 1.67
LINC00543-201ENST00000567234 DAW1Q8N136 415 aa25.5■■□□□ 1.67
LINC00543-201ENST00000567234 SMCR8Q8TEV9 937 aaPredicted RBP25.5■■□□□ 1.67
LINC00543-201ENST00000567234 MKNK1Q9BUB5 465 aa25.5■■□□□ 1.67
LINC00543-201ENST00000567234 BCAS3Q9H6U6 928 aa25.5■■□□□ 1.67
LINC00543-201ENST00000567234 ZNF408Q9H9D4 720 aa25.5■■□□□ 1.67
LINC00543-201ENST00000567234 LARSQ9P2J5 1176 aaKnown RBP25.5■■□□□ 1.67
LINC00543-201ENST00000567234 LCTP09848 1927 aa25.5■■□□□ 1.67
LINC00543-201ENST00000567234 OAS2P29728 719 aaKnown RBP25.49■■□□□ 1.67
LINC00543-201ENST00000567234 YWHABP31946 246 aaKnown RBP25.49■■□□□ 1.67
LINC00543-201ENST00000567234 GOLGA6L1Q8N7Z2 621 aa25.49■■□□□ 1.67
LINC00543-201ENST00000567234 IWS1Q96ST2 819 aa25.49■■□□□ 1.67
LINC00543-201ENST00000567234 POLD4Q9HCU8 107 aa25.49■■□□□ 1.67
LINC00543-201ENST00000567234 NFASCO94856 1347 aa25.49■■□□□ 1.67
LINC00543-201ENST00000567234 PPP1R37O75864 691 aa25.49■■□□□ 1.67
LINC00543-201ENST00000567234 AKAP3O75969 853 aa25.49■■□□□ 1.67
LINC00543-201ENST00000567234 CCNE2O96020 404 aa25.49■■□□□ 1.67
LINC00543-201ENST00000567234 XRCC5P13010 732 aaKnown RBP25.49■■□□□ 1.67
LINC00543-201ENST00000567234 ERCC3P19447 782 aa25.49■■□□□ 1.67
LINC00543-201ENST00000567234 PDXDC1Q6P996 788 aa25.49■■□□□ 1.67
LINC00543-201ENST00000567234 LBX2Q6XYB7 198 aa25.49■■□□□ 1.67
LINC00543-201ENST00000567234 HS2ST1Q7LGA3 356 aa25.49■■□□□ 1.67
LINC00543-201ENST00000567234 CACNA2D4Q7Z3S7 1137 aa25.49■■□□□ 1.67
LINC00543-201ENST00000567234 MOV10L1Q9BXT6 1211 aaKnown RBP25.49■■□□□ 1.67
LINC00543-201ENST00000567234 A0A0U1RQJ8 604 aa25.48■■□□□ 1.67
LINC00543-201ENST00000567234 DKC1O60832 514 aaKnown RBP eCLIP25.48■■□□□ 1.67
LINC00543-201ENST00000567234 AFPP02771 609 aaKnown RBP25.48■■□□□ 1.67
LINC00543-201ENST00000567234 PPATQ06203 517 aa25.48■■□□□ 1.67
LINC00543-201ENST00000567234 KCNA1Q09470 495 aa25.48■■□□□ 1.67
LINC00543-201ENST00000567234 MYBPC2Q14324 1141 aa25.48■■□□□ 1.67
LINC00543-201ENST00000567234 CCDC155Q8N6L0 562 aa25.48■■□□□ 1.67
LINC00543-201ENST00000567234 PROCA1Q8NCQ7 364 aaPredicted RBP25.48■■□□□ 1.67
LINC00543-201ENST00000567234 DNERQ8NFT8 737 aa25.48■■□□□ 1.67
LINC00543-201ENST00000567234 ATRIPQ8WXE1 791 aa25.48■■□□□ 1.67
LINC00543-201ENST00000567234 CCDC42Q96M95 316 aa25.48■■□□□ 1.67
LINC00543-201ENST00000567234 FBXO40Q9UH90 709 aa25.48■■□□□ 1.67
LINC00543-201ENST00000567234 PCDHA10Q9Y5I2 948 aa25.48■■□□□ 1.67
LINC00543-201ENST00000567234 NOL4O94818 638 aa25.47■■□□□ 1.67
LINC00543-201ENST00000567234 HERVK_113P62684 666 aa25.47■■□□□ 1.67
LINC00543-201ENST00000567234 PLS1Q14651 629 aa25.47■■□□□ 1.67
LINC00543-201ENST00000567234 ZC2HC1CQ53FD0 456 aaPredicted RBP25.47■■□□□ 1.67
LINC00543-201ENST00000567234 ZNF569Q5MCW4 686 aa25.47■■□□□ 1.67
LINC00543-201ENST00000567234 RRAGAQ7L523 313 aa25.47■■□□□ 1.67
LINC00543-201ENST00000567234 IRX2Q9BZI1 471 aaPredicted RBP25.47■■□□□ 1.67
LINC00543-201ENST00000567234 GBP3Q9H0R5 595 aa25.47■■□□□ 1.67
LINC00543-201ENST00000567234 ELP3Q9H9T3 547 aa25.47■■□□□ 1.67
LINC00543-201ENST00000567234 LRRC53A6NM62 1247 aa25.47■■□□□ 1.67
LINC00543-201ENST00000567234 KCNA2P16389 499 aa25.47■■□□□ 1.67
LINC00543-201ENST00000567234 PSMC2P35998 433 aaKnown RBP25.47■■□□□ 1.67
LINC00543-201ENST00000567234 GNPTABQ3T906 1256 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms