RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 ZNF710Q8N1W2 664 aa18.67■□□□□ 0.58
CLN6-208ENST00000567060 BANK1Q8NDB2 785 aa18.67■□□□□ 0.58
CLN6-208ENST00000567060 CALML4Q96GE6 196 aa18.67■□□□□ 0.58
CLN6-208ENST00000567060 SPATA32Q96LK8 384 aa18.67■□□□□ 0.58
CLN6-208ENST00000567060 SLC28A3Q9HAS3 691 aa18.67■□□□□ 0.58
CLN6-208ENST00000567060 TCHHQ07283 1943 aa18.66■□□□□ 0.58
CLN6-208ENST00000567060 MBLAC1A4D2B0 266 aaPredicted RBP18.66■□□□□ 0.58
CLN6-208ENST00000567060 CAND2O75155 1236 aa18.66■□□□□ 0.58
CLN6-208ENST00000567060 INSRRP14616 1297 aa18.66■□□□□ 0.58
CLN6-208ENST00000567060 NCLP19338 710 aaKnown RBP18.66■□□□□ 0.58
CLN6-208ENST00000567060 YWHABP31946 246 aaKnown RBP18.66■□□□□ 0.58
CLN6-208ENST00000567060 RABGGTBP53611 331 aa18.66■□□□□ 0.58
CLN6-208ENST00000567060 CCL23P55773 120 aa18.66■□□□□ 0.58
CLN6-208ENST00000567060 GRIK4Q16099 956 aa18.66■□□□□ 0.58
CLN6-208ENST00000567060 UGCGQ16739 394 aa18.66■□□□□ 0.58
CLN6-208ENST00000567060 CCDC155Q8N6L0 562 aa18.66■□□□□ 0.58
CLN6-208ENST00000567060 NECAB3Q96P71 396 aaPredicted RBP18.66■□□□□ 0.58
CLN6-208ENST00000567060 HIPK3Q9H422 1215 aa18.66■□□□□ 0.58
CLN6-208ENST00000567060 RGL1Q9NZL6 768 aa18.66■□□□□ 0.58
CLN6-208ENST00000567060 DBR1Q9UK59 544 aaKnown RBP18.66■□□□□ 0.58
CLN6-208ENST00000567060 GAS2O43903 313 aaKnown RBP18.65■□□□□ 0.58
CLN6-208ENST00000567060 STBD1O95210 358 aa18.65■□□□□ 0.58
CLN6-208ENST00000567060 MYOGP15173 224 aa18.65■□□□□ 0.58
CLN6-208ENST00000567060 CYP4A11Q02928 519 aa18.65■□□□□ 0.58
CLN6-208ENST00000567060 RBL2Q08999 1139 aa18.65■□□□□ 0.58
CLN6-208ENST00000567060 PTK7Q13308 1070 aa18.65■□□□□ 0.58
CLN6-208ENST00000567060 CTTNQ14247 550 aaKnown RBP18.65■□□□□ 0.58
CLN6-208ENST00000567060 TARBP2Q15633 366 aaKnown RBP18.65■□□□□ 0.58
CLN6-208ENST00000567060 PTGISQ16647 500 aa18.65■□□□□ 0.58
CLN6-208ENST00000567060 RPAINQ86UA6 219 aa18.65■□□□□ 0.58
CLN6-208ENST00000567060 CAGE1Q8TC20 777 aa18.65■□□□□ 0.58
CLN6-208ENST00000567060 LEO1Q8WVC0 666 aaPredicted RBP18.65■□□□□ 0.58
CLN6-208ENST00000567060 LMBR1Q8WVP7 490 aa18.65■□□□□ 0.58
CLN6-208ENST00000567060 CDK5RAP3Q96JB5 506 aa18.65■□□□□ 0.58
CLN6-208ENST00000567060 PYM1Q9BRP8 204 aaKnown RBP18.65■□□□□ 0.58
CLN6-208ENST00000567060 NOC4LQ9BVI4 516 aaKnown RBP18.65■□□□□ 0.58
CLN6-208ENST00000567060 CSRNP2Q9H175 543 aa18.65■□□□□ 0.58
CLN6-208ENST00000567060 TRPV6Q9H1D0 765 aa18.65■□□□□ 0.58
CLN6-208ENST00000567060 WNT8AQ9H1J5 351 aa18.65■□□□□ 0.58
CLN6-208ENST00000567060 CCDC39Q9UFE4 941 aa18.65■□□□□ 0.58
CLN6-208ENST00000567060 NOD1Q9Y239 953 aa18.65■□□□□ 0.58
CLN6-208ENST00000567060 GBF1Q92538 1859 aa18.65■□□□□ 0.58
CLN6-208ENST00000567060 DDX11L8A8MPP1 907 aa18.64■□□□□ 0.57
CLN6-208ENST00000567060 B4GALT4O60513 344 aa18.64■□□□□ 0.57
CLN6-208ENST00000567060 MED24O75448 989 aa18.64■□□□□ 0.57
CLN6-208ENST00000567060 PLA2G5P39877 138 aa18.64■□□□□ 0.57
CLN6-208ENST00000567060 RFC5P40937 340 aa18.64■□□□□ 0.57
CLN6-208ENST00000567060 ME1P48163 572 aa18.64■□□□□ 0.57
CLN6-208ENST00000567060 FOXD4L6Q3SYB3 417 aaPredicted RBP18.64■□□□□ 0.57
CLN6-208ENST00000567060 ADALQ6DHV7 355 aa18.64■□□□□ 0.57
CLN6-208ENST00000567060 GDF6Q6KF10 455 aaPredicted RBP18.64■□□□□ 0.57
CLN6-208ENST00000567060 FOXD4L3Q6VB84 417 aaPredicted RBP18.64■□□□□ 0.57
CLN6-208ENST00000567060 ANO5Q75V66 913 aa18.64■□□□□ 0.57
CLN6-208ENST00000567060 CABP7Q86V35 215 aa18.64■□□□□ 0.57
CLN6-208ENST00000567060 SERINC5Q86VE9 423 aa18.64■□□□□ 0.57
CLN6-208ENST00000567060 RETREG2Q8NC44 543 aa18.64■□□□□ 0.57
CLN6-208ENST00000567060 CCDC43Q96MW1 224 aaKnown RBP18.64■□□□□ 0.57
CLN6-208ENST00000567060 MMTAG2Q9BU76 263 aaKnown RBP18.64■□□□□ 0.57
CLN6-208ENST00000567060 SETD4Q9NVD3 440 aa18.64■□□□□ 0.57
CLN6-208ENST00000567060 SEPT9Q9UHD8 586 aaPredicted RBP18.64■□□□□ 0.57
CLN6-208ENST00000567060 TUBE1Q9UJT0 475 aa18.64■□□□□ 0.57
CLN6-208ENST00000567060 PCDHA2Q9Y5H9 948 aa18.64■□□□□ 0.57
CLN6-208ENST00000567060 TCF20Q9UGU0 1960 aaKnown RBP18.64■□□□□ 0.57
CLN6-208ENST00000567060 SMIM35A0A1B0GVV1 85 aa18.63■□□□□ 0.57
CLN6-208ENST00000567060 PARNO95453 639 aaKnown RBP18.63■□□□□ 0.57
CLN6-208ENST00000567060 CHMP4BP1P59074 171 aa18.63■□□□□ 0.57
CLN6-208ENST00000567060 TFF2Q03403 129 aa18.63■□□□□ 0.57
CLN6-208ENST00000567060 BFSP2Q13515 415 aa18.63■□□□□ 0.57
CLN6-208ENST00000567060 CLEC17AQ6ZS10 378 aa18.63■□□□□ 0.57
CLN6-208ENST00000567060 FAM43BQ6ZT52 329 aaPredicted RBP18.63■□□□□ 0.57
CLN6-208ENST00000567060 RSPH3Q86UC2 560 aa18.63■□□□□ 0.57
CLN6-208ENST00000567060 MTIF3Q9H2K0 278 aaKnown RBP18.63■□□□□ 0.57
CLN6-208ENST00000567060 CYP26B1Q9NR63 512 aa18.63■□□□□ 0.57
CLN6-208ENST00000567060 WRAP73Q9P2S5 460 aaPredicted RBP18.63■□□□□ 0.57
CLN6-208ENST00000567060 DNM3Q9UQ16 869 aa18.63■□□□□ 0.57
CLN6-208ENST00000567060 ZBTB42B2RXF5 422 aa18.62■□□□□ 0.57
CLN6-208ENST00000567060 PITPNM1O00562 1244 aa18.62■□□□□ 0.57
CLN6-208ENST00000567060 DGAT1O75907 488 aa18.62■□□□□ 0.57
CLN6-208ENST00000567060 TMOD1P28289 359 aa18.62■□□□□ 0.57
CLN6-208ENST00000567060 CDC42EP1Q00587 391 aa18.62■□□□□ 0.57
CLN6-208ENST00000567060 TBC1D8BQ0IIM8 1120 aa18.62■□□□□ 0.57
CLN6-208ENST00000567060 TMEM119Q4V9L6 283 aa18.62■□□□□ 0.57
CLN6-208ENST00000567060 AXDND1Q5T1B0 1012 aaPredicted RBP18.62■□□□□ 0.57
CLN6-208ENST00000567060 MTHFD1LQ6UB35 978 aa18.62■□□□□ 0.57
CLN6-208ENST00000567060 NME8Q8N427 588 aa18.62■□□□□ 0.57
CLN6-208ENST00000567060 SLC7A3Q8WY07 619 aa18.62■□□□□ 0.57
CLN6-208ENST00000567060 CEP170P1Q96L14 293 aa18.62■□□□□ 0.57
CLN6-208ENST00000567060 TRMT13Q9NUP7 481 aaKnown RBP18.62■□□□□ 0.57
CLN6-208ENST00000567060 FAM13BQ9NYF5 915 aa18.62■□□□□ 0.57
CLN6-208ENST00000567060 STK17AQ9UEE5 414 aa18.62■□□□□ 0.57
CLN6-208ENST00000567060 PCDHA7Q9UN72 937 aa18.62■□□□□ 0.57
CLN6-208ENST00000567060 KIAA1024Q9UPX6 916 aa18.62■□□□□ 0.57
CLN6-208ENST00000567060 TRIP12Q14669 1992 aaPredicted RBP18.61■□□□□ 0.57
CLN6-208ENST00000567060 A0A1W2PQ27 194 aa18.61■□□□□ 0.57
CLN6-208ENST00000567060 A0A1W2PQ64 194 aa18.61■□□□□ 0.57
CLN6-208ENST00000567060 A0A1W2PQD8 194 aa18.61■□□□□ 0.57
CLN6-208ENST00000567060 EYA4O95677 639 aa18.61■□□□□ 0.57
CLN6-208ENST00000567060 KLRC1P26715 233 aa18.61■□□□□ 0.57
CLN6-208ENST00000567060 RARRES1P49788 294 aa18.61■□□□□ 0.57
CLN6-208ENST00000567060 GRIN1Q05586 938 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms