RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 MAGED2Q9UNF1 606 aaPredicted RBP3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 GPR52Q9Y2T5 361 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 AFG3L2Q9Y4W6 797 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 PCDHGB2Q9Y5G2 931 aa3.97□□□□□ -1.77
HERPUD1-211ENST00000566550 TMEM265A0A087WTH1 108 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 A6NCN8 305 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 C2orf71A6NGG8 1288 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 GOLIM4O00461 696 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 B3GALT2O43825 422 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 MGEA5O60502 916 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 DTNBO60941 627 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 HIP1RO75146 1068 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 NDUFS2O75306 463 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 LRRN2O75325 713 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 TUSC2O75896 110 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 POU2F2P09086 479 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 IFIT1P09914 478 aaKnown RBP3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 CLEC2LP0C7M8 214 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 PLS3P13797 630 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 IFNGR1P15260 489 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 LTBRP36941 435 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 ZEB1P37275 1124 aaPredicted RBP3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 PIK3CBP42338 1070 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 SEPHS1P49903 392 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 ADKP55263 362 aaKnown RBP3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 IRF9Q00978 393 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 ALDH6A1Q02252 535 aaKnown RBP3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 KIZQ2M2Z5 673 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 CWF19L1Q69YN2 538 aaKnown RBP3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 CFAP161Q6P656 301 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 SLC23A3Q6PIS1 610 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 CRTC3Q6UUV7 619 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 NPNTQ6UXI9 565 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 TTLL10Q6ZVT0 673 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 SYDE1Q6ZW31 735 aaPredicted RBP3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 TMC3Q7Z5M5 1100 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 COL23A1Q86Y22 540 aaPredicted RBP3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 CCDC103Q8IW40 242 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 SIRT2Q8IXJ6 389 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 KCT2Q8NC54 265 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 NAXEQ8NCW5 288 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 FLAD1Q8NFF5 587 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 LRTOMTQ8WZ04 291 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 ISL2Q96A47 359 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 LTV1Q96GA3 475 aaPredicted RBP3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 HRASLS5Q96KN8 279 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 TBATAQ96M53 351 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 ELF4Q99607 663 aaPredicted RBP3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 BOCQ9BWV1 1114 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 LRRC27Q9C0I9 530 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.96□□□□□ -1.784e-6■□□□□ 11.1
HERPUD1-211ENST00000566550 ATXN3LQ9H3M9 355 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 ACSS3Q9H6R3 686 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 DMRT3Q9NQL9 472 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 GPR27Q9NS67 375 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 LMCD1Q9NZU5 365 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 CRIM1Q9NZV1 1036 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 TPCN1Q9ULQ1 816 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 NOL7Q9UMY1 257 aaKnown RBP3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 DAGLAQ9Y4D2 1042 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 CTDP1Q9Y5B0 961 aaPredicted RBP3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 PCDHA2Q9Y5H9 948 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 GPR45Q9Y5Y3 372 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 BACE2Q9Y5Z0 518 aa3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 LRRFIP2Q9Y608 721 aaKnown RBP3.96□□□□□ -1.78
HERPUD1-211ENST00000566550 A0A087WV62 115 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 SLC12A8A0AV02 714 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 CAPN8A6NHC0 703 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 FAM47E-STBD1D6RA91 191 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 H3BML4 177 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 GSTA4O15217 222 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 NCAM2O15394 837 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 HRGP04196 525 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 AGXTP21549 392 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 HTR1BP28222 390 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 SMARCA1P28370 1054 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 GRK3P35626 688 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 AFMP43652 599 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 CEBPAP49715 358 aaPredicted RBP3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 KIF11P52732 1056 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 CACNB3P54284 484 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 POU4F1Q01851 419 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 ICA1Q05084 483 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 BLMHQ13867 455 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 STARD3Q14849 445 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 CNN3Q15417 329 aaKnown RBP3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 TAF12Q16514 161 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 CRY1Q16526 586 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 IFI16Q16666 785 aaKnown RBP3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 AOC3Q16853 763 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 ARHGAP44Q17R89 818 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 PGS1Q32NB8 556 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 CCDC157Q569K6 752 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 ARMC3Q5W041 872 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 FAAH2Q6GMR7 532 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 KRTAP5-3Q6L8H2 238 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 FSTL4Q6MZW2 842 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 TLDC1Q6P9B6 456 aa3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 RSPO2Q6UXX9 243 aaPredicted RBP3.95□□□□□ -1.78
HERPUD1-211ENST00000566550 USP45Q70EL2 814 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms