RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 PDE4CQ08493 712 aa23.49■■□□□ 1.35
SPSB3-208ENST00000566339 DHX34Q14147 1143 aaKnown RBP23.49■■□□□ 1.35
SPSB3-208ENST00000566339 TRADDQ15628 312 aa23.49■■□□□ 1.35
SPSB3-208ENST00000566339 Q4G0T1 1027 aa23.49■■□□□ 1.35
SPSB3-208ENST00000566339 SLC16A10Q8TF71 515 aa23.49■■□□□ 1.35
SPSB3-208ENST00000566339 TATDN2Q93075 761 aa23.49■■□□□ 1.35
SPSB3-208ENST00000566339 KDM4CQ9H3R0 1056 aa23.49■■□□□ 1.35
SPSB3-208ENST00000566339 SIX2Q9NPC8 291 aa23.49■■□□□ 1.35
SPSB3-208ENST00000566339 DDX20Q9UHI6 824 aaKnown RBP23.49■■□□□ 1.35
SPSB3-208ENST00000566339 GREB1LQ9C091 1923 aaPredicted RBP23.48■■□□□ 1.35
SPSB3-208ENST00000566339 POTEB3A0JP26 581 aa23.48■■□□□ 1.35
SPSB3-208ENST00000566339 POTECB2RU33 542 aa23.48■■□□□ 1.35
SPSB3-208ENST00000566339 EIF3DO15371 548 aaKnown RBP eCLIP23.48■■□□□ 1.35
SPSB3-208ENST00000566339 HADHBP55084 474 aaKnown RBP23.48■■□□□ 1.35
SPSB3-208ENST00000566339 PTENP60484 403 aa23.48■■□□□ 1.35
SPSB3-208ENST00000566339 POTEBQ6S5H4 581 aa23.48■■□□□ 1.35
SPSB3-208ENST00000566339 SLC30A5Q8TAD4 765 aa23.48■■□□□ 1.35
SPSB3-208ENST00000566339 UBLCP1Q8WVY7 318 aaPredicted RBP23.48■■□□□ 1.35
SPSB3-208ENST00000566339 RFFLQ8WZ73 363 aa23.48■■□□□ 1.35
SPSB3-208ENST00000566339 FAM20AQ96MK3 541 aa23.48■■□□□ 1.35
SPSB3-208ENST00000566339 PSMD1Q99460 953 aa23.48■■□□□ 1.35
SPSB3-208ENST00000566339 FAM129AQ9BZQ8 928 aa23.48■■□□□ 1.35
SPSB3-208ENST00000566339 GPCPD1Q9NPB8 672 aa23.48■■□□□ 1.35
SPSB3-208ENST00000566339 TBC1D7Q9P0N9 293 aa23.48■■□□□ 1.35
SPSB3-208ENST00000566339 UBE4BO95155 1302 aa23.48■■□□□ 1.35
SPSB3-208ENST00000566339 GOLGA6L10A0A0M3HER8 536 aa23.47■■□□□ 1.35
SPSB3-208ENST00000566339 ADRA2BP18089 450 aa23.47■■□□□ 1.35
SPSB3-208ENST00000566339 HPDP32754 393 aaPredicted RBP23.47■■□□□ 1.35
SPSB3-208ENST00000566339 BYSLQ13895 437 aaKnown RBP23.47■■□□□ 1.35
SPSB3-208ENST00000566339 TCEAL1Q15170 157 aa23.47■■□□□ 1.35
SPSB3-208ENST00000566339 GKAP1Q5VSY0 366 aaPredicted RBP23.47■■□□□ 1.35
SPSB3-208ENST00000566339 RBM46Q8TBY0 533 aaKnown RBP23.47■■□□□ 1.35
SPSB3-208ENST00000566339 PPANQ9NQ55 473 aaKnown RBP23.47■■□□□ 1.35
SPSB3-208ENST00000566339 OLFML3Q9NRN5 406 aa23.47■■□□□ 1.35
SPSB3-208ENST00000566339 PPP1R12BO60237 982 aaPredicted RBP23.47■■□□□ 1.35
SPSB3-208ENST00000566339 ERCC3P19447 782 aa23.47■■□□□ 1.35
SPSB3-208ENST00000566339 RFX1P22670 979 aa23.47■■□□□ 1.35
SPSB3-208ENST00000566339 RDXP35241 583 aaKnown RBP23.47■■□□□ 1.35
SPSB3-208ENST00000566339 RFC4P35249 363 aa23.47■■□□□ 1.35
SPSB3-208ENST00000566339 PRR5LQ6MZQ0 368 aa23.47■■□□□ 1.35
SPSB3-208ENST00000566339 LRRC47Q8N1G4 583 aaKnown RBP23.47■■□□□ 1.35
SPSB3-208ENST00000566339 CRYGNQ8WXF5 182 aa23.47■■□□□ 1.35
SPSB3-208ENST00000566339 PGM2Q96G03 612 aa23.47■■□□□ 1.35
SPSB3-208ENST00000566339 SEC16BQ96JE7 1060 aa23.47■■□□□ 1.35
SPSB3-208ENST00000566339 CCDC17Q96LX7 622 aa23.47■■□□□ 1.35
SPSB3-208ENST00000566339 ANO3Q9BYT9 981 aa23.47■■□□□ 1.35
SPSB3-208ENST00000566339 DDX47Q9H0S4 455 aaKnown RBP23.47■■□□□ 1.35
SPSB3-208ENST00000566339 NEUROG2Q9H2A3 272 aa23.47■■□□□ 1.35
SPSB3-208ENST00000566339 GGA1Q9UJY5 639 aa23.47■■□□□ 1.35
SPSB3-208ENST00000566339 DDX3XO00571 662 aaKnown RBP eCLIP23.46■■□□□ 1.35
SPSB3-208ENST00000566339 MED24O75448 989 aa23.46■■□□□ 1.35
SPSB3-208ENST00000566339 NR3C1P04150 777 aa23.46■■□□□ 1.35
SPSB3-208ENST00000566339 ACTN1P12814 892 aa23.46■■□□□ 1.35
SPSB3-208ENST00000566339 AKR1B1P15121 316 aa23.46■■□□□ 1.35
SPSB3-208ENST00000566339 MAP2K2P36507 400 aa23.46■■□□□ 1.35
SPSB3-208ENST00000566339 RNASE9P60153 205 aaKnown RBP23.46■■□□□ 1.35
SPSB3-208ENST00000566339 PPATQ06203 517 aa23.46■■□□□ 1.35
SPSB3-208ENST00000566339 ODF2Q5BJF6 829 aa23.46■■□□□ 1.35
SPSB3-208ENST00000566339 TRAPPC3LQ5T215 181 aa23.46■■□□□ 1.35
SPSB3-208ENST00000566339 GPIHBP1Q8IV16 184 aa23.46■■□□□ 1.35
SPSB3-208ENST00000566339 SLC35C1Q96A29 364 aa23.46■■□□□ 1.35
SPSB3-208ENST00000566339 FMO2Q99518 471 aa23.46■■□□□ 1.35
SPSB3-208ENST00000566339 STK33Q9BYT3 514 aa23.46■■□□□ 1.35
SPSB3-208ENST00000566339 DAPK3O43293 454 aa23.45■■□□□ 1.34
SPSB3-208ENST00000566339 DNAJC8O75937 253 aaPredicted RBP23.45■■□□□ 1.34
SPSB3-208ENST00000566339 FOSP01100 380 aaPredicted RBP23.45■■□□□ 1.34
SPSB3-208ENST00000566339 SPIRE1Q08AE8 756 aa23.45■■□□□ 1.34
SPSB3-208ENST00000566339 DAAM2Q86T65 1068 aa23.45■■□□□ 1.34
SPSB3-208ENST00000566339 PLCD3Q8N3E9 789 aa23.45■■□□□ 1.34
SPSB3-208ENST00000566339 RAPGEF5Q92565 580 aa23.45■■□□□ 1.34
SPSB3-208ENST00000566339 CCDC114Q96M63 670 aa23.45■■□□□ 1.34
SPSB3-208ENST00000566339 POLR3CQ9BUI4 534 aaPredicted RBP23.45■■□□□ 1.34
SPSB3-208ENST00000566339 TMEM109Q9BVC6 243 aa23.45■■□□□ 1.34
SPSB3-208ENST00000566339 AP1M1Q9BXS5 423 aa23.45■■□□□ 1.34
SPSB3-208ENST00000566339 SLC40A1Q9NP59 571 aa23.45■■□□□ 1.34
SPSB3-208ENST00000566339 PARP2Q9UGN5 583 aa23.45■■□□□ 1.34
SPSB3-208ENST00000566339 CNOT7Q9UIV1 285 aaKnown RBP23.45■■□□□ 1.34
SPSB3-208ENST00000566339 RASAL2Q9UJF2 1139 aa23.45■■□□□ 1.34
SPSB3-208ENST00000566339 NOVA2Q9UNW9 492 aaKnown RBP23.45■■□□□ 1.34
SPSB3-208ENST00000566339 GSTA1P08263 222 aa23.45■■□□□ 1.34
SPSB3-208ENST00000566339 SOX5P35711 763 aa23.45■■□□□ 1.34
SPSB3-208ENST00000566339 DHX9Q08211 1270 aaKnown RBP23.45■■□□□ 1.34
SPSB3-208ENST00000566339 XRCC4Q13426 336 aa23.45■■□□□ 1.34
SPSB3-208ENST00000566339 NBPF9Q3BBW0 867 aa23.45■■□□□ 1.34
SPSB3-208ENST00000566339 KRT71Q3SY84 523 aa23.45■■□□□ 1.34
SPSB3-208ENST00000566339 PREPLQ4J6C6 727 aaPredicted RBP23.45■■□□□ 1.34
SPSB3-208ENST00000566339 ANKRD20A8PQ5CZ79 823 aa23.45■■□□□ 1.34
SPSB3-208ENST00000566339 MFSD14BQ5SR56 506 aa23.45■■□□□ 1.34
SPSB3-208ENST00000566339 ERMARDQ5T6L9 678 aa23.45■■□□□ 1.34
SPSB3-208ENST00000566339 DPP8Q6V1X1 898 aaPredicted RBP23.45■■□□□ 1.34
SPSB3-208ENST00000566339 ETNPPLQ8TBG4 499 aa23.45■■□□□ 1.34
SPSB3-208ENST00000566339 DCAF4Q8WV16 495 aa23.45■■□□□ 1.34
SPSB3-208ENST00000566339 RUNDC3BQ96NL0 473 aa23.45■■□□□ 1.34
SPSB3-208ENST00000566339 GPR101Q96P66 508 aaPredicted RBP23.45■■□□□ 1.34
SPSB3-208ENST00000566339 AMACRQ9UHK6 382 aa23.45■■□□□ 1.34
SPSB3-208ENST00000566339 CCDC169A6NNP5 214 aa23.44■■□□□ 1.34
SPSB3-208ENST00000566339 AKAP3O75969 853 aa23.44■■□□□ 1.34
SPSB3-208ENST00000566339 GGPS1O95749 300 aa23.44■■□□□ 1.34
SPSB3-208ENST00000566339 WLSQ5T9L3 541 aa23.44■■□□□ 1.34
SPSB3-208ENST00000566339 MSL1Q68DK7 614 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms