RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 ARVCFO00192 962 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 FAM13AO94988 1023 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 LETM1O95202 739 aaPredicted RBP8.64□□□□□ -1.03
CDH1-208ENST00000565810 RPLP2P05387 115 aaKnown RBP8.64□□□□□ -1.03
CDH1-208ENST00000565810 IDEP14735 1019 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 GUCY2CP25092 1073 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 KLRC1P26715 233 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 ASIC1P78348 528 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 CDC42EP1Q00587 391 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 EMC2Q15006 297 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 CAMK4Q16566 473 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 IER5Q5VY09 327 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 EFCAB12Q6NXP0 572 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 CAVIN1Q6NZI2 390 aaKnown RBP8.64□□□□□ -1.03
CDH1-208ENST00000565810 C1orf186Q6ZWK4 172 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 MAEAQ7L5Y9 396 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 DYMQ7RTS9 669 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 NECAB2Q7Z6G3 386 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 SH3RF1Q7Z6J0 888 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 SESTD1Q86VW0 696 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 CCDC65Q8IXS2 484 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 LRRC15Q8TF66 581 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 TCP11Q8WWU5 503 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 DDX12PQ92771 950 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 KIFAP3Q92845 792 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 SMARCE1Q969G3 411 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 IFT74Q96LB3 600 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 DRC1Q96MC2 740 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 MAP7D2Q96T17 732 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 RUSC1Q9BVN2 902 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 TRIM9Q9C026 710 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 BLZF1Q9H2G9 400 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 ZHX3Q9H4I2 956 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 DHX33Q9H6R0 707 aaKnown RBP8.64□□□□□ -1.03
CDH1-208ENST00000565810 SUGCTQ9HAC7 445 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 RMND1Q9NWS8 449 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 GTF2IRD1Q9UHL9 959 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 TUBE1Q9UJT0 475 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 ODF2LQ9ULJ1 636 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 COL4A3BPQ9Y5P4 624 aa8.64□□□□□ -1.03
CDH1-208ENST00000565810 MROH7Q68CQ1 1323 aa8.63□□□□□ -1.03
CDH1-208ENST00000565810 MCM3APO60318 1980 aa8.63□□□□□ -1.03
CDH1-208ENST00000565810 PVALEFA0A1B0GWK0 134 aa8.63□□□□□ -1.03
CDH1-208ENST00000565810 TLR3O15455 904 aaKnown RBP8.63□□□□□ -1.03
CDH1-208ENST00000565810 ASAP2O43150 1006 aa8.63□□□□□ -1.03
CDH1-208ENST00000565810 HIP1RO75146 1068 aa8.63□□□□□ -1.03
CDH1-208ENST00000565810 CYP2C9P11712 490 aa8.63□□□□□ -1.03
CDH1-208ENST00000565810 GAP43P17677 238 aa8.63□□□□□ -1.03
CDH1-208ENST00000565810 RAD51AP2Q09MP3 1159 aa8.63□□□□□ -1.03
CDH1-208ENST00000565810 MAPK8IP2Q13387 824 aaPredicted RBP8.63□□□□□ -1.03
CDH1-208ENST00000565810 PNOCQ13519 176 aa8.63□□□□□ -1.03
CDH1-208ENST00000565810 CUL4BQ13620 913 aa8.63□□□□□ -1.03
CDH1-208ENST00000565810 GIT2Q14161 759 aa8.63□□□□□ -1.03
CDH1-208ENST00000565810 ARSHQ5FYA8 562 aa8.63□□□□□ -1.03
CDH1-208ENST00000565810 HERC4Q5GLZ8 1057 aaPredicted RBP8.63□□□□□ -1.03
CDH1-208ENST00000565810 TAF2Q6P1X5 1199 aa8.63□□□□□ -1.03
CDH1-208ENST00000565810 CNNM4Q6P4Q7 775 aa8.63□□□□□ -1.03
CDH1-208ENST00000565810 MTHFD1LQ6UB35 978 aa8.63□□□□□ -1.03
CDH1-208ENST00000565810 UNC13DQ70J99 1090 aa8.63□□□□□ -1.03
CDH1-208ENST00000565810 RSPH3Q86UC2 560 aa8.63□□□□□ -1.03
CDH1-208ENST00000565810 GRAMD1CQ8IYS0 662 aa8.63□□□□□ -1.03
CDH1-208ENST00000565810 ZNF710Q8N1W2 664 aa8.63□□□□□ -1.03
CDH1-208ENST00000565810 MYCT1Q8N699 235 aa8.63□□□□□ -1.03
CDH1-208ENST00000565810 LMBR1Q8WVP7 490 aa8.63□□□□□ -1.03
CDH1-208ENST00000565810 TRAPPC12Q8WVT3 735 aa8.63□□□□□ -1.03
CDH1-208ENST00000565810 PSPC1Q8WXF1 523 aaKnown RBP8.63□□□□□ -1.03
CDH1-208ENST00000565810 ANP32EQ9BTT0 268 aa8.63□□□□□ -1.03
CDH1-208ENST00000565810 GTPBP4Q9BZE4 634 aaKnown RBP8.63□□□□□ -1.03
CDH1-208ENST00000565810 C11orf49Q9H6J7 331 aa8.63□□□□□ -1.03
CDH1-208ENST00000565810 C17orf75Q9HAS0 396 aa8.63□□□□□ -1.03
CDH1-208ENST00000565810 PARVGQ9HBI0 331 aa8.63□□□□□ -1.03
CDH1-208ENST00000565810 EXOC1Q9NV70 894 aa8.63□□□□□ -1.03
CDH1-208ENST00000565810 PANK4Q9NVE7 773 aa8.63□□□□□ -1.03
CDH1-208ENST00000565810 LARSQ9P2J5 1176 aaKnown RBP8.63□□□□□ -1.03
CDH1-208ENST00000565810 SUCLA2Q9P2R7 463 aaPredicted RBP8.63□□□□□ -1.03
CDH1-208ENST00000565810 PCDHA2Q9Y5H9 948 aa8.63□□□□□ -1.03
CDH1-208ENST00000565810 IGKV6-21A0A0C4DH24 114 aa8.62□□□□□ -1.03
CDH1-208ENST00000565810 NPHP3-ACAD11A0A0J9YXS1 232 aa8.62□□□□□ -1.03
CDH1-208ENST00000565810 SMIM35A0A1B0GVV1 85 aa8.62□□□□□ -1.03
CDH1-208ENST00000565810 ZBTB42B2RXF5 422 aa8.62□□□□□ -1.03
CDH1-208ENST00000565810 TREHO43280 583 aa8.62□□□□□ -1.03
CDH1-208ENST00000565810 C22orf31O95567 290 aa8.62□□□□□ -1.03
CDH1-208ENST00000565810 RPN1P04843 607 aaKnown RBP8.62□□□□□ -1.03
CDH1-208ENST00000565810 SMTNP53814 917 aa8.62□□□□□ -1.03
CDH1-208ENST00000565810 ATN1P54259 1190 aaPredicted RBP8.62□□□□□ -1.03
CDH1-208ENST00000565810 RTP1P59025 263 aa8.62□□□□□ -1.03
CDH1-208ENST00000565810 MDM2Q00987 491 aaPredicted RBP8.62□□□□□ -1.03
CDH1-208ENST00000565810 DPYDQ12882 1025 aa8.62□□□□□ -1.03
CDH1-208ENST00000565810 DMP1Q13316 513 aaPredicted RBP8.62□□□□□ -1.03
CDH1-208ENST00000565810 TFDP1Q14186 410 aa8.62□□□□□ -1.03
CDH1-208ENST00000565810 MXD4Q14582 209 aaPredicted RBP8.62□□□□□ -1.03
CDH1-208ENST00000565810 PPP2R5AQ15172 486 aa8.62□□□□□ -1.03
CDH1-208ENST00000565810 PTGISQ16647 500 aa8.62□□□□□ -1.03
CDH1-208ENST00000565810 COL13A1Q5TAT6 717 aaPredicted RBP8.62□□□□□ -1.03
CDH1-208ENST00000565810 GDF6Q6KF10 455 aaPredicted RBP8.62□□□□□ -1.03
CDH1-208ENST00000565810 NME8Q8N427 588 aa8.62□□□□□ -1.03
CDH1-208ENST00000565810 LRRC71Q8N4P6 559 aa8.62□□□□□ -1.03
CDH1-208ENST00000565810 SLC43A3Q8NBI5 491 aa8.62□□□□□ -1.03
CDH1-208ENST00000565810 SLC17A8Q8NDX2 589 aa8.62□□□□□ -1.03
CDH1-208ENST00000565810 PPP1R13LQ8WUF5 828 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms