RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 NFIL3Q16649 462 aa21.54■■□□□ 1.04
CLN6-205ENST00000564846 LY6KQ17RY6 165 aa21.54■■□□□ 1.04
CLN6-205ENST00000564846 ZNF467Q7Z7K2 595 aaPredicted RBP21.54■■□□□ 1.04
CLN6-205ENST00000564846 C17orf53Q8N3J3 647 aaPredicted RBP21.54■■□□□ 1.04
CLN6-205ENST00000564846 GOLGA5Q8TBA6 731 aa21.54■■□□□ 1.04
CLN6-205ENST00000564846 SEPT1Q8WYJ6 367 aa21.54■■□□□ 1.04
CLN6-205ENST00000564846 CCDC51Q96ER9 411 aa21.54■■□□□ 1.04
CLN6-205ENST00000564846 ST6GALNAC4Q9H4F1 302 aa21.54■■□□□ 1.04
CLN6-205ENST00000564846 CYP26B1Q9NR63 512 aa21.54■■□□□ 1.04
CLN6-205ENST00000564846 K7ENM7 598 aa21.53■■□□□ 1.04
CLN6-205ENST00000564846 TGFB1I1O43294 461 aa21.53■■□□□ 1.04
CLN6-205ENST00000564846 KCNA1Q09470 495 aa21.53■■□□□ 1.04
CLN6-205ENST00000564846 CELF3Q5SZQ8 465 aaKnown RBP21.53■■□□□ 1.04
CLN6-205ENST00000564846 CEP135Q66GS9 1140 aa21.53■■□□□ 1.04
CLN6-205ENST00000564846 GPR142Q7Z601 462 aa21.53■■□□□ 1.04
CLN6-205ENST00000564846 FBXO16Q8IX29 292 aaPredicted RBP21.53■■□□□ 1.04
CLN6-205ENST00000564846 MCPH1Q8NEM0 835 aa21.53■■□□□ 1.04
CLN6-205ENST00000564846 KIFAP3Q92845 792 aa21.53■■□□□ 1.04
CLN6-205ENST00000564846 ERGIC2Q96RQ1 377 aa21.53■■□□□ 1.04
CLN6-205ENST00000564846 C17orf75Q9HAS0 396 aa21.53■■□□□ 1.04
CLN6-205ENST00000564846 MFAP3LO75121 409 aa21.53■■□□□ 1.04
CLN6-205ENST00000564846 ARIH2O95376 493 aa21.53■■□□□ 1.04
CLN6-205ENST00000564846 NR3C1P04150 777 aa21.53■■□□□ 1.04
CLN6-205ENST00000564846 OATP04181 439 aa21.53■■□□□ 1.04
CLN6-205ENST00000564846 GOLGA8FQ08AF8 430 aa21.53■■□□□ 1.04
CLN6-205ENST00000564846 GOLGA8DPQ0D2H9 430 aa21.53■■□□□ 1.04
CLN6-205ENST00000564846 TTLL4Q14679 1199 aa21.53■■□□□ 1.04
CLN6-205ENST00000564846 FAM102BQ5T8I3 360 aa21.53■■□□□ 1.04
CLN6-205ENST00000564846 FAM160B1Q5W0V3 765 aa21.53■■□□□ 1.04
CLN6-205ENST00000564846 CCDC62Q6P9F0 684 aa21.53■■□□□ 1.04
CLN6-205ENST00000564846 ARMCX2Q7L311 632 aa21.53■■□□□ 1.04
CLN6-205ENST00000564846 HS2ST1Q7LGA3 356 aa21.53■■□□□ 1.04
CLN6-205ENST00000564846 RETREG2Q8NC44 543 aa21.53■■□□□ 1.04
CLN6-205ENST00000564846 AFAP1L1Q8TED9 768 aa21.53■■□□□ 1.04
CLN6-205ENST00000564846 BAG1Q99933 345 aaPredicted RBP21.53■■□□□ 1.04
CLN6-205ENST00000564846 NUP58Q9BVL2 599 aa21.53■■□□□ 1.04
CLN6-205ENST00000564846 TMEM206Q9H813 350 aa21.53■■□□□ 1.04
CLN6-205ENST00000564846 ZMYM2Q9UBW7 1377 aa21.53■■□□□ 1.04
CLN6-205ENST00000564846 DOCK5Q9H7D0 1870 aa21.53■■□□□ 1.04
CLN6-205ENST00000564846 PASKQ96RG2 1323 aa21.52■■□□□ 1.04
CLN6-205ENST00000564846 STX10O60499 249 aa21.52■■□□□ 1.04
CLN6-205ENST00000564846 CASP14P31944 242 aa21.52■■□□□ 1.04
CLN6-205ENST00000564846 INHBEP58166 350 aa21.52■■□□□ 1.04
CLN6-205ENST00000564846 GRB14Q14449 540 aa21.52■■□□□ 1.04
CLN6-205ENST00000564846 FRMD5Q7Z6J6 570 aa21.52■■□□□ 1.04
CLN6-205ENST00000564846 TRIM59Q8IWR1 403 aa21.52■■□□□ 1.04
CLN6-205ENST00000564846 SCFD2Q8WU76 684 aa21.52■■□□□ 1.04
CLN6-205ENST00000564846 IQCDQ96DY2 449 aa21.52■■□□□ 1.04
CLN6-205ENST00000564846 GBP3Q9H0R5 595 aa21.52■■□□□ 1.04
CLN6-205ENST00000564846 PDLIM7Q9NR12 457 aa21.52■■□□□ 1.04
CLN6-205ENST00000564846 KCND1Q9NSA2 647 aa21.52■■□□□ 1.04
CLN6-205ENST00000564846 FAM184BQ9ULE4 1060 aa21.52■■□□□ 1.04
CLN6-205ENST00000564846 DIS3Q9Y2L1 958 aaKnown RBP21.52■■□□□ 1.04
CLN6-205ENST00000564846 NKRFO15226 690 aaKnown RBP eCLIP21.51■■□□□ 1.03
CLN6-205ENST00000564846 SLC16A3O15427 465 aaKnown RBP21.51■■□□□ 1.03
CLN6-205ENST00000564846 ATP4AP20648 1035 aa21.51■■□□□ 1.03
CLN6-205ENST00000564846 SMTNP53814 917 aa21.51■■□□□ 1.03
CLN6-205ENST00000564846 RTP1P59025 263 aa21.51■■□□□ 1.03
CLN6-205ENST00000564846 PLEKHH3Q7Z736 793 aa21.51■■□□□ 1.03
CLN6-205ENST00000564846 CPLX3Q8WVH0 158 aa21.51■■□□□ 1.03
CLN6-205ENST00000564846 NAA15Q9BXJ9 866 aaKnown RBP21.51■■□□□ 1.03
CLN6-205ENST00000564846 NIFKQ9BYG3 293 aaKnown RBP21.51■■□□□ 1.03
CLN6-205ENST00000564846 ATP6V0A4Q9HBG4 840 aa21.51■■□□□ 1.03
CLN6-205ENST00000564846 VTA1Q9NP79 307 aa21.51■■□□□ 1.03
CLN6-205ENST00000564846 GPRC5CQ9NQ84 441 aa21.51■■□□□ 1.03
CLN6-205ENST00000564846 ZNFX1Q9P2E3 1918 aaKnown RBP21.51■■□□□ 1.03
CLN6-205ENST00000564846 ARHGAP6O43182 974 aa21.51■■□□□ 1.03
CLN6-205ENST00000564846 TXNP10599 105 aaKnown RBP21.51■■□□□ 1.03
CLN6-205ENST00000564846 TCF7P36402 384 aaPredicted RBP21.51■■□□□ 1.03
CLN6-205ENST00000564846 FXR1P51114 621 aaKnown RBP eCLIP21.51■■□□□ 1.03
CLN6-205ENST00000564846 STAT5BP51692 787 aa21.51■■□□□ 1.03
CLN6-205ENST00000564846 NCKAP1LP55160 1127 aa21.51■■□□□ 1.03
CLN6-205ENST00000564846 PEX3P56589 373 aa21.51■■□□□ 1.03
CLN6-205ENST00000564846 DMP1Q13316 513 aaPredicted RBP21.51■■□□□ 1.03
CLN6-205ENST00000564846 SYCP1Q15431 976 aa21.51■■□□□ 1.03
CLN6-205ENST00000564846 DPP9Q86TI2 863 aa21.51■■□□□ 1.03
CLN6-205ENST00000564846 TMEM139Q8IV31 216 aa21.51■■□□□ 1.03
CLN6-205ENST00000564846 DHX37Q8IY37 1157 aaKnown RBP21.51■■□□□ 1.03
CLN6-205ENST00000564846 PCYT2Q99447 389 aa21.51■■□□□ 1.03
CLN6-205ENST00000564846 AZI2Q9H6S1 392 aa21.51■■□□□ 1.03
CLN6-205ENST00000564846 METTL14Q9HCE5 456 aaKnown RBP21.51■■□□□ 1.03
CLN6-205ENST00000564846 NRBP2Q9NSY0 501 aa21.51■■□□□ 1.03
CLN6-205ENST00000564846 KCNG1Q9UIX4 513 aa21.51■■□□□ 1.03
CLN6-205ENST00000564846 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.51■■□□□ 1.03
CLN6-205ENST00000564846 PLXNB2O15031 1838 aa21.5■■□□□ 1.03
CLN6-205ENST00000564846 WDR81Q562E7 1941 aa21.5■■□□□ 1.03
CLN6-205ENST00000564846 IGF2BP3O00425 579 aaKnown RBP eCLIP21.5■■□□□ 1.03
CLN6-205ENST00000564846 NOP56O00567 594 aaKnown RBP21.5■■□□□ 1.03
CLN6-205ENST00000564846 SLC10A3P09131 477 aa21.5■■□□□ 1.03
CLN6-205ENST00000564846 GTF2BQ00403 316 aa21.5■■□□□ 1.03
CLN6-205ENST00000564846 PPP2R3AQ06190 1150 aa21.5■■□□□ 1.03
CLN6-205ENST00000564846 FIGNQ5HY92 759 aa21.5■■□□□ 1.03
CLN6-205ENST00000564846 MAMDC4Q6UXC1 1216 aa21.5■■□□□ 1.03
CLN6-205ENST00000564846 HAUS6Q7Z4H7 955 aa21.5■■□□□ 1.03
CLN6-205ENST00000564846 SYCP3Q8IZU3 236 aa21.5■■□□□ 1.03
CLN6-205ENST00000564846 SPIRE2Q8WWL2 714 aa21.5■■□□□ 1.03
CLN6-205ENST00000564846 ACCSQ96QU6 501 aa21.5■■□□□ 1.03
CLN6-205ENST00000564846 GPR20Q99678 358 aa21.5■■□□□ 1.03
CLN6-205ENST00000564846 ADGRA2Q96PE1 1338 aa21.5■■□□□ 1.03
CLN6-205ENST00000564846 EPB41P11171 864 aaKnown RBP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms