RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 PLA2G4FQ68DD2 849 aa11.13□□□□□ -0.63
CDH1-206ENST00000564676 ASTLQ6HA08 431 aaPredicted RBP11.13□□□□□ -0.63
CDH1-206ENST00000564676 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.13□□□□□ -0.63
CDH1-206ENST00000564676 TSHZ1Q6ZSZ6 1077 aa11.13□□□□□ -0.63
CDH1-206ENST00000564676 ANO5Q75V66 913 aa11.13□□□□□ -0.63
CDH1-206ENST00000564676 OTUD6AQ7L8S5 288 aa11.13□□□□□ -0.63
CDH1-206ENST00000564676 HERC6Q8IVU3 1022 aa11.13□□□□□ -0.63
CDH1-206ENST00000564676 HSCBQ8IWL3 235 aa11.13□□□□□ -0.63
CDH1-206ENST00000564676 C4orf19Q8IY42 314 aa11.13□□□□□ -0.63
CDH1-206ENST00000564676 MYOCDQ8IZQ8 938 aa11.13□□□□□ -0.63
CDH1-206ENST00000564676 USP38Q8NB14 1042 aa11.13□□□□□ -0.63
CDH1-206ENST00000564676 NEK9Q8TD19 979 aa11.13□□□□□ -0.63
CDH1-206ENST00000564676 SNX21Q969T3 373 aa11.13□□□□□ -0.63
CDH1-206ENST00000564676 CEP170P1Q96L14 293 aa11.13□□□□□ -0.63
CDH1-206ENST00000564676 NKX2-4Q9H2Z4 354 aa11.13□□□□□ -0.63
CDH1-206ENST00000564676 SEMA6BQ9H3T3 888 aa11.13□□□□□ -0.63
CDH1-206ENST00000564676 AGO3Q9H9G7 860 aaKnown RBP11.13□□□□□ -0.63
CDH1-206ENST00000564676 PCDHB6Q9Y5E3 794 aa11.13□□□□□ -0.63
CDH1-206ENST00000564676 PCDHA11Q9Y5I1 949 aa11.13□□□□□ -0.63
CDH1-206ENST00000564676 SQORQ9Y6N5 450 aa11.13□□□□□ -0.63
CDH1-206ENST00000564676 KDM3AQ9Y4C1 1321 aa11.12□□□□□ -0.63
CDH1-206ENST00000564676 LOXHD1Q8IVV2 1947 aa11.12□□□□□ -0.63
CDH1-206ENST00000564676 TMEM265A0A087WTH1 108 aa11.12□□□□□ -0.63
CDH1-206ENST00000564676 VPS37CA5D8V6 355 aaPredicted RBP11.12□□□□□ -0.63
CDH1-206ENST00000564676 POTEMA6NI47 508 aa11.12□□□□□ -0.63
CDH1-206ENST00000564676 TLL1O43897 1013 aa11.12□□□□□ -0.63
CDH1-206ENST00000564676 MYOGP15173 224 aa11.12□□□□□ -0.63
CDH1-206ENST00000564676 CD52P31358 61 aa11.12□□□□□ -0.63
CDH1-206ENST00000564676 YWHABP31946 246 aaKnown RBP11.12□□□□□ -0.63
CDH1-206ENST00000564676 DNM2P50570 870 aa11.12□□□□□ -0.63
CDH1-206ENST00000564676 NPEPPSP55786 919 aa11.12□□□□□ -0.63
CDH1-206ENST00000564676 NFX1Q12986 1120 aaKnown RBP11.12□□□□□ -0.63
CDH1-206ENST00000564676 PAK2Q13177 524 aa11.12□□□□□ -0.63
CDH1-206ENST00000564676 PTGDRQ13258 359 aa11.12□□□□□ -0.63
CDH1-206ENST00000564676 KIZQ2M2Z5 673 aa11.12□□□□□ -0.63
CDH1-206ENST00000564676 XKR9Q5GH70 373 aa11.12□□□□□ -0.63
CDH1-206ENST00000564676 FAM117BQ6P1L5 589 aa11.12□□□□□ -0.63
CDH1-206ENST00000564676 TMCO2Q7Z6W1 182 aaPredicted RBP11.12□□□□□ -0.63
CDH1-206ENST00000564676 ERMNQ8TAM6 284 aa11.12□□□□□ -0.63
CDH1-206ENST00000564676 INTS4Q96HW7 963 aaKnown RBP11.12□□□□□ -0.63
CDH1-206ENST00000564676 SCLT1Q96NL6 688 aa11.12□□□□□ -0.63
CDH1-206ENST00000564676 OSMRQ99650 979 aa11.12□□□□□ -0.63
CDH1-206ENST00000564676 HSD17B14Q9BPX1 270 aa11.12□□□□□ -0.63
CDH1-206ENST00000564676 JPH2Q9BR39 696 aaPredicted RBP11.12□□□□□ -0.63
CDH1-206ENST00000564676 TTYH1Q9H313 450 aaPredicted RBP11.12□□□□□ -0.63
CDH1-206ENST00000564676 ZNF576Q9H609 170 aa11.12□□□□□ -0.63
CDH1-206ENST00000564676 SLC28A3Q9HAS3 691 aa11.12□□□□□ -0.63
CDH1-206ENST00000564676 CDHR5Q9HBB8 845 aa11.12□□□□□ -0.63
CDH1-206ENST00000564676 CYP26B1Q9NR63 512 aa11.12□□□□□ -0.63
CDH1-206ENST00000564676 MTMR10Q9NXD2 777 aa11.12□□□□□ -0.63
CDH1-206ENST00000564676 WRAP73Q9P2S5 460 aaPredicted RBP11.12□□□□□ -0.63
CDH1-206ENST00000564676 YBX2Q9Y2T7 364 aaKnown RBP11.12□□□□□ -0.63
CDH1-206ENST00000564676 LAMA3Q16787 3333 aa11.12□□□□□ -0.63
CDH1-206ENST00000564676 MICAL3Q7RTP6 2002 aa11.11□□□□□ -0.63
CDH1-206ENST00000564676 GPR32O75388 356 aa11.11□□□□□ -0.63
CDH1-206ENST00000564676 RPS6KA5O75582 802 aa11.11□□□□□ -0.63
CDH1-206ENST00000564676 UPP2O95045 317 aa11.11□□□□□ -0.63
CDH1-206ENST00000564676 CRYBB1P53674 252 aaPredicted RBP11.11□□□□□ -0.63
CDH1-206ENST00000564676 POLGP54098 1239 aaPredicted RBP11.11□□□□□ -0.63
CDH1-206ENST00000564676 NLRP11P59045 1033 aaKnown RBP11.11□□□□□ -0.63
CDH1-206ENST00000564676 ODR4Q5SWX8 454 aa11.11□□□□□ -0.63
CDH1-206ENST00000564676 PPP2R2DQ66LE6 453 aa11.11□□□□□ -0.63
CDH1-206ENST00000564676 EXOC8Q8IYI6 725 aa11.11□□□□□ -0.63
CDH1-206ENST00000564676 ZNF710Q8N1W2 664 aa11.11□□□□□ -0.63
CDH1-206ENST00000564676 LINC01465Q8N7H1 131 aa11.11□□□□□ -0.63
CDH1-206ENST00000564676 C4orf32Q8N8J7 132 aa11.11□□□□□ -0.63
CDH1-206ENST00000564676 SLC7A3Q8WY07 619 aa11.11□□□□□ -0.63
CDH1-206ENST00000564676 ZNF668Q96K58 619 aaPredicted RBP11.11□□□□□ -0.63
CDH1-206ENST00000564676 CCDC43Q96MW1 224 aaKnown RBP11.11□□□□□ -0.63
CDH1-206ENST00000564676 CEP89Q96ST8 783 aa11.11□□□□□ -0.63
CDH1-206ENST00000564676 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.11□□□□□ -0.63
CDH1-206ENST00000564676 SUCLA2Q9P2R7 463 aaPredicted RBP11.11□□□□□ -0.63
CDH1-206ENST00000564676 PADI3Q9ULW8 664 aa11.11□□□□□ -0.63
CDH1-206ENST00000564676 NOC2LQ9Y3T9 749 aaKnown RBP11.11□□□□□ -0.63
CDH1-206ENST00000564676 PPME1Q9Y570 386 aa11.11□□□□□ -0.63
CDH1-206ENST00000564676 GBF1Q92538 1859 aa11.1□□□□□ -0.63
CDH1-206ENST00000564676 IGKV6-21A0A0C4DH24 114 aa11.1□□□□□ -0.63
CDH1-206ENST00000564676 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.1□□□□□ -0.63
CDH1-206ENST00000564676 LAD1O00515 517 aa11.1□□□□□ -0.63
CDH1-206ENST00000564676 ENPP3O14638 875 aa11.1□□□□□ -0.63
CDH1-206ENST00000564676 ZBTB39O15060 712 aa11.1□□□□□ -0.63
CDH1-206ENST00000564676 GPR182O15218 404 aa11.1□□□□□ -0.63
CDH1-206ENST00000564676 MAFO75444 373 aaPredicted RBP11.1□□□□□ -0.63
CDH1-206ENST00000564676 LYPLA2O95372 231 aa11.1□□□□□ -0.63
CDH1-206ENST00000564676 GJB5O95377 273 aa11.1□□□□□ -0.63
CDH1-206ENST00000564676 CA3P07451 260 aa11.1□□□□□ -0.63
CDH1-206ENST00000564676 HSP90AA1P07900 732 aaKnown RBP11.1□□□□□ -0.63
CDH1-206ENST00000564676 RFC5P40937 340 aa11.1□□□□□ -0.63
CDH1-206ENST00000564676 CDC42EP1Q00587 391 aa11.1□□□□□ -0.63
CDH1-206ENST00000564676 DRP2Q13474 957 aa11.1□□□□□ -0.63
CDH1-206ENST00000564676 DTHD1Q6ZMT9 781 aa11.1□□□□□ -0.63
CDH1-206ENST00000564676 FERMT3Q86UX7 667 aa11.1□□□□□ -0.63
CDH1-206ENST00000564676 NLRP7Q8WX94 980 aa11.1□□□□□ -0.63
CDH1-206ENST00000564676 KIF12Q96FN5 646 aa11.1□□□□□ -0.63
CDH1-206ENST00000564676 RAD9AQ99638 391 aa11.1□□□□□ -0.63
CDH1-206ENST00000564676 FTHL17Q9BXU8 183 aa11.1□□□□□ -0.63
CDH1-206ENST00000564676 RAB34Q9BZG1 259 aa11.1□□□□□ -0.63
CDH1-206ENST00000564676 TUFT1Q9NNX1 390 aa11.1□□□□□ -0.63
CDH1-206ENST00000564676 BMP2KQ9NSY1 1161 aaPredicted RBP11.1□□□□□ -0.63
CDH1-206ENST00000564676 ANKEF1Q9NU02 776 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms