RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 ZNF575Q86XF7 245 aa4.57□□□□□ -1.68
CHD9-211ENST00000564600 BCL6BQ8N143 479 aaPredicted RBP4.57□□□□□ -1.68
CHD9-211ENST00000564600 ERCC4Q92889 916 aaPredicted RBP4.57□□□□□ -1.68
CHD9-211ENST00000564600 ZDHHC5Q9C0B5 715 aa4.57□□□□□ -1.68
CHD9-211ENST00000564600 CD2APQ9Y5K6 639 aa4.57□□□□□ -1.68
CHD9-211ENST00000564600 SLC4A7Q9Y6M7 1214 aa4.57□□□□□ -1.68
CHD9-211ENST00000564600 OPA1O60313 960 aa4.56□□□□□ -1.68
CHD9-211ENST00000564600 ACO1P21399 889 aaKnown RBP4.56□□□□□ -1.68
CHD9-211ENST00000564600 PTX3P26022 381 aaPredicted RBP4.56□□□□□ -1.68
CHD9-211ENST00000564600 SDHAP31040 664 aa4.56□□□□□ -1.68
CHD9-211ENST00000564600 IGFALSP35858 605 aa4.56□□□□□ -1.68
CHD9-211ENST00000564600 USP10Q14694 798 aaKnown RBP4.56□□□□□ -1.68
CHD9-211ENST00000564600 KRTAP15-1Q3LI76 137 aa4.56□□□□□ -1.68
CHD9-211ENST00000564600 HS1BP3Q53T59 392 aa4.56□□□□□ -1.68
CHD9-211ENST00000564600 PIK3R6Q5UE93 754 aa4.56□□□□□ -1.68
CHD9-211ENST00000564600 CREB3L3Q68CJ9 461 aa4.56□□□□□ -1.68
CHD9-211ENST00000564600 Q6ZSN1 163 aa4.56□□□□□ -1.68
CHD9-211ENST00000564600 REXO1L1PQ8IX06 675 aa4.56□□□□□ -1.68
CHD9-211ENST00000564600 HIPK4Q8NE63 616 aa4.56□□□□□ -1.68
CHD9-211ENST00000564600 NEIL1Q96FI4 390 aaPredicted RBP4.56□□□□□ -1.68
CHD9-211ENST00000564600 DPYSL5Q9BPU6 564 aa4.56□□□□□ -1.68
CHD9-211ENST00000564600 BOCQ9BWV1 1114 aa4.56□□□□□ -1.68
CHD9-211ENST00000564600 BTBD2Q9BX70 525 aa4.56□□□□□ -1.68
CHD9-211ENST00000564600 CARD11Q9BXL7 1154 aa4.56□□□□□ -1.68
CHD9-211ENST00000564600 OR10A5Q9H207 317 aa4.56□□□□□ -1.68
CHD9-211ENST00000564600 SEMA4AQ9H3S1 761 aa4.56□□□□□ -1.68
CHD9-211ENST00000564600 MAGEL2Q9UJ55 1249 aa4.56□□□□□ -1.68
CHD9-211ENST00000564600 WDR33Q9C0J8 1336 aaKnown RBP4.55□□□□□ -1.68
CHD9-211ENST00000564600 PTPDC1A2A3K4 754 aa4.55□□□□□ -1.68
CHD9-211ENST00000564600 NPTXRO95502 500 aa4.55□□□□□ -1.68
CHD9-211ENST00000564600 ASLP04424 464 aa4.55□□□□□ -1.68
CHD9-211ENST00000564600 JMJD7P0C870 316 aa4.55□□□□□ -1.68
CHD9-211ENST00000564600 ETV4P43268 484 aa4.55□□□□□ -1.68
CHD9-211ENST00000564600 STAT5BP51692 787 aa4.55□□□□□ -1.68
CHD9-211ENST00000564600 MOGSQ13724 837 aa4.55□□□□□ -1.68
CHD9-211ENST00000564600 EIF4HQ15056 248 aaKnown RBP4.55□□□□□ -1.68
CHD9-211ENST00000564600 TRIM68Q6AZZ1 485 aa4.55□□□□□ -1.68
CHD9-211ENST00000564600 DPP8Q6V1X1 898 aaPredicted RBP4.55□□□□□ -1.68
CHD9-211ENST00000564600 JAZF1Q86VZ6 243 aa4.55□□□□□ -1.68
CHD9-211ENST00000564600 C1orf210Q8IVY1 113 aa4.55□□□□□ -1.68
CHD9-211ENST00000564600 CHST14Q8NCH0 376 aa4.55□□□□□ -1.68
CHD9-211ENST00000564600 IL17DQ8TAD2 202 aa4.55□□□□□ -1.68
CHD9-211ENST00000564600 PLEKHG4BQ96PX9 1271 aa4.55□□□□□ -1.68
CHD9-211ENST00000564600 OR14A2Q96R54 314 aa4.55□□□□□ -1.68
CHD9-211ENST00000564600 H2AFY2Q9P0M6 372 aaPredicted RBP4.55□□□□□ -1.68
CHD9-211ENST00000564600 ASB1Q9Y576 335 aa4.55□□□□□ -1.68
CHD9-211ENST00000564600 MRPL42Q9Y6G3 142 aaKnown RBP4.55□□□□□ -1.68
CHD9-211ENST00000564600 A0A087X1B8 175 aa4.54□□□□□ -1.68
CHD9-211ENST00000564600 CBX4O00257 560 aa4.54□□□□□ -1.68
CHD9-211ENST00000564600 CUTAO60888 179 aa4.54□□□□□ -1.68
CHD9-211ENST00000564600 HMGCRP04035 888 aa4.54□□□□□ -1.68
CHD9-211ENST00000564600 COMTP21964 271 aa4.54□□□□□ -1.68
CHD9-211ENST00000564600 RGS3P49796 1198 aa4.54□□□□□ -1.68
CHD9-211ENST00000564600 KIF11P52732 1056 aa4.54□□□□□ -1.68
CHD9-211ENST00000564600 ACAP1Q15027 740 aa4.54□□□□□ -1.68
CHD9-211ENST00000564600 FNDC7Q5VTL7 733 aa4.54□□□□□ -1.68
CHD9-211ENST00000564600 CDCA2Q69YH5 1023 aaPredicted RBP4.54□□□□□ -1.68
CHD9-211ENST00000564600 TMEM200BQ69YZ2 307 aa4.54□□□□□ -1.68
CHD9-211ENST00000564600 OTOP2Q7RTS6 562 aa4.54□□□□□ -1.68
CHD9-211ENST00000564600 FILIP1Q7Z7B0 1213 aa4.54□□□□□ -1.68
CHD9-211ENST00000564600 DDX53Q86TM3 631 aaKnown RBP4.54□□□□□ -1.68
CHD9-211ENST00000564600 CFHR4Q92496 578 aa4.54□□□□□ -1.68
CHD9-211ENST00000564600 MTFR1LQ9H019 292 aa4.54□□□□□ -1.68
CHD9-211ENST00000564600 MMRN2Q9H8L6 949 aa4.54□□□□□ -1.68
CHD9-211ENST00000564600 FANCLQ9NW38 375 aa4.54□□□□□ -1.68
CHD9-211ENST00000564600 TNFRSF18Q9Y5U5 241 aa4.54□□□□□ -1.68
CHD9-211ENST00000564600 HIP1RO75146 1068 aa4.53□□□□□ -1.68
CHD9-211ENST00000564600 RFPL3O75679 317 aa4.53□□□□□ -1.68
CHD9-211ENST00000564600 SLC9A1P19634 815 aa4.53□□□□□ -1.68
CHD9-211ENST00000564600 ANTXR2P58335 489 aa4.53□□□□□ -1.68
CHD9-211ENST00000564600 ALDH6A1Q02252 535 aaKnown RBP4.53□□□□□ -1.68
CHD9-211ENST00000564600 DUSP8Q13202 625 aa4.53□□□□□ -1.68
CHD9-211ENST00000564600 PCOLCEQ15113 449 aa4.53□□□□□ -1.68
CHD9-211ENST00000564600 ESRP1Q6NXG1 681 aaKnown RBP4.53□□□□□ -1.68
CHD9-211ENST00000564600 CC2D1AQ6P1N0 951 aaPredicted RBP4.53□□□□□ -1.68
CHD9-211ENST00000564600 ZNF627Q7L945 461 aa4.53□□□□□ -1.68
CHD9-211ENST00000564600 CXXC5Q7LFL8 322 aaKnown RBP4.53□□□□□ -1.68
CHD9-211ENST00000564600 NXPE1Q8N323 547 aa4.53□□□□□ -1.68
CHD9-211ENST00000564600 ZNF808Q8N4W9 903 aaPredicted RBP4.53□□□□□ -1.68
CHD9-211ENST00000564600 C16orf92Q96LL3 132 aa4.53□□□□□ -1.68
CHD9-211ENST00000564600 SEC61A2Q9H9S3 476 aa4.53□□□□□ -1.68
CHD9-211ENST00000564600 B4GALT6Q9UBX8 382 aa4.53□□□□□ -1.68
CHD9-211ENST00000564600 A0A0G2JNJ9 132 aa4.52□□□□□ -1.69
CHD9-211ENST00000564600 ZNF891A8MT65 544 aaPredicted RBP4.52□□□□□ -1.69
CHD9-211ENST00000564600 B4E1Z4 1266 aa4.52□□□□□ -1.69
CHD9-211ENST00000564600 PRLP01236 227 aa4.52□□□□□ -1.69
CHD9-211ENST00000564600 STAT3P40763 770 aa4.52□□□□□ -1.69
CHD9-211ENST00000564600 MRE11P49959 708 aa4.52□□□□□ -1.69
CHD9-211ENST00000564600 SLC6A3Q01959 620 aa4.52□□□□□ -1.69
CHD9-211ENST00000564600 DPTQ07507 201 aa4.52□□□□□ -1.69
CHD9-211ENST00000564600 HNRNPA0Q13151 305 aaKnown RBP4.52□□□□□ -1.69
CHD9-211ENST00000564600 CFAP100Q494V2 611 aa4.52□□□□□ -1.69
CHD9-211ENST00000564600 GRAMD4Q6IC98 578 aa4.52□□□□□ -1.69
CHD9-211ENST00000564600 LDLRAD3Q86YD5 345 aa4.52□□□□□ -1.69
CHD9-211ENST00000564600 DNAJC10Q8IXB1 793 aa4.52□□□□□ -1.69
CHD9-211ENST00000564600 IFNL2Q8IZJ0 200 aa4.52□□□□□ -1.69
CHD9-211ENST00000564600 KIAA1958Q8N8K9 716 aa4.52□□□□□ -1.69
CHD9-211ENST00000564600 OR14K1Q8NGZ2 314 aa4.52□□□□□ -1.69
CHD9-211ENST00000564600 LARP4BQ92615 738 aaKnown RBP4.52□□□□□ -1.69
CHD9-211ENST00000564600 ELF4Q99607 663 aaPredicted RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms