RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 TBC1D8BQ0IIM8 1120 aa17.14■□□□□ 0.33
COMMD4-210ENST00000564587 ADAM9Q13443 819 aa17.14■□□□□ 0.33
COMMD4-210ENST00000564587 CCDC40Q4G0X9 1142 aa17.14■□□□□ 0.33
COMMD4-210ENST00000564587 VWA3BQ502W6 1294 aa17.14■□□□□ 0.33
COMMD4-210ENST00000564587 ANO5Q75V66 913 aa17.14■□□□□ 0.33
COMMD4-210ENST00000564587 PLEKHH3Q7Z736 793 aa17.14■□□□□ 0.33
COMMD4-210ENST00000564587 CCDC60Q8IWA6 550 aaPredicted RBP17.14■□□□□ 0.33
COMMD4-210ENST00000564587 EXOC8Q8IYI6 725 aa17.14■□□□□ 0.33
COMMD4-210ENST00000564587 MSL3Q8N5Y2 521 aaKnown RBP17.14■□□□□ 0.33
COMMD4-210ENST00000564587 AFAP1L1Q8TED9 768 aa17.14■□□□□ 0.33
COMMD4-210ENST00000564587 CCDC102AQ96A19 550 aa17.14■□□□□ 0.33
COMMD4-210ENST00000564587 PANX2Q96RD6 677 aa17.14■□□□□ 0.33
COMMD4-210ENST00000564587 PTPN18Q99952 460 aa17.14■□□□□ 0.33
COMMD4-210ENST00000564587 NAA15Q9BXJ9 866 aaKnown RBP17.14■□□□□ 0.33
COMMD4-210ENST00000564587 FGFBP2Q9BYJ0 223 aa17.14■□□□□ 0.33
COMMD4-210ENST00000564587 METTL14Q9HCE5 456 aaKnown RBP17.14■□□□□ 0.33
COMMD4-210ENST00000564587 RRAGDQ9NQL2 400 aaPredicted RBP17.14■□□□□ 0.33
COMMD4-210ENST00000564587 PLXNB2O15031 1838 aa17.14■□□□□ 0.33
COMMD4-210ENST00000564587 SLC15A5A6NIM6 579 aa17.13■□□□□ 0.33
COMMD4-210ENST00000564587 SFI1A8K8P3 1242 aa17.13■□□□□ 0.33
COMMD4-210ENST00000564587 PES1O00541 588 aaKnown RBP17.13■□□□□ 0.33
COMMD4-210ENST00000564587 SLC16A3O15427 465 aaKnown RBP17.13■□□□□ 0.33
COMMD4-210ENST00000564587 CCP110O43303 1012 aa17.13■□□□□ 0.33
COMMD4-210ENST00000564587 ZNF862O60290 1169 aa17.13■□□□□ 0.33
COMMD4-210ENST00000564587 STBD1O95210 358 aa17.13■□□□□ 0.33
COMMD4-210ENST00000564587 GGPS1O95749 300 aa17.13■□□□□ 0.33
COMMD4-210ENST00000564587 CASP5P51878 434 aa17.13■□□□□ 0.33
COMMD4-210ENST00000564587 CCZ1BP86790 482 aa17.13■□□□□ 0.33
COMMD4-210ENST00000564587 CCZ1P86791 482 aaPredicted RBP17.13■□□□□ 0.33
COMMD4-210ENST00000564587 PRKCEQ02156 737 aa17.13■□□□□ 0.33
COMMD4-210ENST00000564587 LRMPQ12912 555 aa17.13■□□□□ 0.33
COMMD4-210ENST00000564587 IRF5Q13568 498 aa17.13■□□□□ 0.33
COMMD4-210ENST00000564587 CELF3Q5SZQ8 465 aaKnown RBP17.13■□□□□ 0.33
COMMD4-210ENST00000564587 GPR142Q7Z601 462 aa17.13■□□□□ 0.33
COMMD4-210ENST00000564587 FRMD5Q7Z6J6 570 aa17.13■□□□□ 0.33
COMMD4-210ENST00000564587 SAPCD2Q86UD0 394 aa17.13■□□□□ 0.33
COMMD4-210ENST00000564587 DAW1Q8N136 415 aa17.13■□□□□ 0.33
COMMD4-210ENST00000564587 SPIRE2Q8WWL2 714 aa17.13■□□□□ 0.33
COMMD4-210ENST00000564587 ERGIC2Q96RQ1 377 aa17.13■□□□□ 0.33
COMMD4-210ENST00000564587 FIZ1Q96SL8 496 aa17.13■□□□□ 0.33
COMMD4-210ENST00000564587 STRA6Q9BX79 667 aa17.13■□□□□ 0.33
COMMD4-210ENST00000564587 NIFKQ9BYG3 293 aaKnown RBP17.13■□□□□ 0.33
COMMD4-210ENST00000564587 AZI2Q9H6S1 392 aa17.13■□□□□ 0.33
COMMD4-210ENST00000564587 KCND1Q9NSA2 647 aa17.13■□□□□ 0.33
COMMD4-210ENST00000564587 PASKQ96RG2 1323 aa17.13■□□□□ 0.33
COMMD4-210ENST00000564587 PLXNA1Q9UIW2 1896 aa17.12■□□□□ 0.33
COMMD4-210ENST00000564587 GSTTP1A0A1W2PQM5 241 aa17.12■□□□□ 0.33
COMMD4-210ENST00000564587 STX10O60499 249 aa17.12■□□□□ 0.33
COMMD4-210ENST00000564587 PPP1R37O75864 691 aa17.12■□□□□ 0.33
COMMD4-210ENST00000564587 OATP04181 439 aa17.12■□□□□ 0.33
COMMD4-210ENST00000564587 SLC10A3P09131 477 aa17.12■□□□□ 0.33
COMMD4-210ENST00000564587 NR2F2P24468 414 aa17.12■□□□□ 0.33
COMMD4-210ENST00000564587 NMT1P30419 496 aaKnown RBP17.12■□□□□ 0.33
COMMD4-210ENST00000564587 SLC26A2P50443 739 aa17.12■□□□□ 0.33
COMMD4-210ENST00000564587 SP4Q02446 784 aa17.12■□□□□ 0.33
COMMD4-210ENST00000564587 SREBF2Q12772 1141 aa17.12■□□□□ 0.33
COMMD4-210ENST00000564587 GRB14Q14449 540 aa17.12■□□□□ 0.33
COMMD4-210ENST00000564587 NOLC1Q14978 699 aaKnown RBP eCLIP17.12■□□□□ 0.33
COMMD4-210ENST00000564587 UTP14CQ5TAP6 766 aaKnown RBP17.12■□□□□ 0.33
COMMD4-210ENST00000564587 CCDC62Q6P9F0 684 aa17.12■□□□□ 0.33
COMMD4-210ENST00000564587 MAMDC4Q6UXC1 1216 aa17.12■□□□□ 0.33
COMMD4-210ENST00000564587 ARMCX2Q7L311 632 aa17.12■□□□□ 0.33
COMMD4-210ENST00000564587 TMEM174Q8WUU8 243 aa17.12■□□□□ 0.33
COMMD4-210ENST00000564587 HHIPL1Q96JK4 782 aa17.12■□□□□ 0.33
COMMD4-210ENST00000564587 ACCSQ96QU6 501 aa17.12■□□□□ 0.33
COMMD4-210ENST00000564587 MKNK1Q9BUB5 465 aa17.12■□□□□ 0.33
COMMD4-210ENST00000564587 GBP3Q9H0R5 595 aa17.12■□□□□ 0.33
COMMD4-210ENST00000564587 TMX1Q9H3N1 280 aa17.12■□□□□ 0.33
COMMD4-210ENST00000564587 NDST4Q9H3R1 872 aa17.12■□□□□ 0.33
COMMD4-210ENST00000564587 ATP6V0A4Q9HBG4 840 aa17.12■□□□□ 0.33
COMMD4-210ENST00000564587 CYP26B1Q9NR63 512 aa17.12■□□□□ 0.33
COMMD4-210ENST00000564587 SPTLC3Q9NUV7 552 aa17.12■□□□□ 0.33
COMMD4-210ENST00000564587 SEPT9Q9UHD8 586 aaPredicted RBP17.12■□□□□ 0.33
COMMD4-210ENST00000564587 EXOC7Q9UPT5 735 aa17.12■□□□□ 0.33
COMMD4-210ENST00000564587 DOCK5Q9H7D0 1870 aa17.12■□□□□ 0.33
COMMD4-210ENST00000564587 RBM47A0AV96 593 aaKnown RBP17.11■□□□□ 0.33
COMMD4-210ENST00000564587 K7ENM7 598 aa17.11■□□□□ 0.33
COMMD4-210ENST00000564587 NOP56O00567 594 aaKnown RBP17.11■□□□□ 0.33
COMMD4-210ENST00000564587 ARHGAP6O43182 974 aa17.11■□□□□ 0.33
COMMD4-210ENST00000564587 NR3C1P04150 777 aa17.11■□□□□ 0.33
COMMD4-210ENST00000564587 EPB41P11171 864 aaKnown RBP17.11■□□□□ 0.33
COMMD4-210ENST00000564587 HOXD13P35453 343 aa17.11■□□□□ 0.33
COMMD4-210ENST00000564587 RFC5P40937 340 aa17.11■□□□□ 0.33
COMMD4-210ENST00000564587 STAT5BP51692 787 aa17.11■□□□□ 0.33
COMMD4-210ENST00000564587 NPEPPSP55786 919 aa17.11■□□□□ 0.33
COMMD4-210ENST00000564587 DMP1Q13316 513 aaPredicted RBP17.11■□□□□ 0.33
COMMD4-210ENST00000564587 ARID5BQ14865 1188 aa17.11■□□□□ 0.33
COMMD4-210ENST00000564587 FIGNQ5HY92 759 aa17.11■□□□□ 0.33
COMMD4-210ENST00000564587 FAM102BQ5T8I3 360 aa17.11■□□□□ 0.33
COMMD4-210ENST00000564587 PLPPR4Q7Z2D5 763 aa17.11■□□□□ 0.33
COMMD4-210ENST00000564587 DPP9Q86TI2 863 aa17.11■□□□□ 0.33
COMMD4-210ENST00000564587 DHX37Q8IY37 1157 aaKnown RBP17.11■□□□□ 0.33
COMMD4-210ENST00000564587 SYCP3Q8IZU3 236 aa17.11■□□□□ 0.33
COMMD4-210ENST00000564587 TC2NQ8N9U0 490 aa17.11■□□□□ 0.33
COMMD4-210ENST00000564587 SMC1BQ8NDV3 1235 aa17.11■□□□□ 0.33
COMMD4-210ENST00000564587 NTPCRQ9BSD7 190 aaKnown RBP17.11■□□□□ 0.33
COMMD4-210ENST00000564587 R3HDMLQ9H3Y0 253 aa17.11■□□□□ 0.33
COMMD4-210ENST00000564587 PDLIM7Q9NR12 457 aa17.11■□□□□ 0.33
COMMD4-210ENST00000564587 PYCARDQ9ULZ3 195 aa17.11■□□□□ 0.33
COMMD4-210ENST00000564587 TLL2Q9Y6L7 1015 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms