RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 YBX2Q9Y2T7 364 aaKnown RBP15.02■□□□□ -0
CLK3-216ENST00000564468 ARID2Q68CP9 1835 aa15.01□□□□□ -0.01
CLK3-216ENST00000564468 TXKP42681 527 aa15.01□□□□□ -0.01
CLK3-216ENST00000564468 CRYBB1P53674 252 aaPredicted RBP15.01□□□□□ -0.01
CLK3-216ENST00000564468 PAK2Q13177 524 aa15.01□□□□□ -0.01
CLK3-216ENST00000564468 TARBP2Q15633 366 aaKnown RBP15.01□□□□□ -0.01
CLK3-216ENST00000564468 TCTN1Q2MV58 587 aa15.01□□□□□ -0.01
CLK3-216ENST00000564468 MTERF2Q49AM1 385 aa15.01□□□□□ -0.01
CLK3-216ENST00000564468 TTC38Q5R3I4 469 aa15.01□□□□□ -0.01
CLK3-216ENST00000564468 MTMR9Q96QG7 549 aa15.01□□□□□ -0.01
CLK3-216ENST00000564468 SUGCTQ9HAC7 445 aa15.01□□□□□ -0.01
CLK3-216ENST00000564468 RNF216Q9NWF9 866 aaPredicted RBP15.01□□□□□ -0.01
CLK3-216ENST00000564468 GINS2Q9Y248 185 aa15.01□□□□□ -0.01
CLK3-216ENST00000564468 INSL6Q9Y581 213 aa15.01□□□□□ -0.01
CLK3-216ENST00000564468 BDP1A6H8Y1 2624 aa15.01□□□□□ -0.01
CLK3-216ENST00000564468 GPR182O15218 404 aa15□□□□□ -0.01
CLK3-216ENST00000564468 RPS6KA5O75582 802 aa15□□□□□ -0.01
CLK3-216ENST00000564468 CA3P07451 260 aa15□□□□□ -0.01
CLK3-216ENST00000564468 CD52P31358 61 aa15□□□□□ -0.01
CLK3-216ENST00000564468 CLCN3P51790 818 aa15□□□□□ -0.01
CLK3-216ENST00000564468 SPIRE1Q08AE8 756 aa15□□□□□ -0.01
CLK3-216ENST00000564468 MKRN4PQ13434 485 aaPredicted RBP15□□□□□ -0.01
CLK3-216ENST00000564468 ZNF174Q15697 407 aa15□□□□□ -0.01
CLK3-216ENST00000564468 MCTP1Q6DN14 999 aa15□□□□□ -0.01
CLK3-216ENST00000564468 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15□□□□□ -0.01
CLK3-216ENST00000564468 TOP1MTQ969P6 601 aa15□□□□□ -0.01
CLK3-216ENST00000564468 LXNQ9BS40 222 aa15□□□□□ -0.01
CLK3-216ENST00000564468 OSBPL7Q9BZF2 842 aa15□□□□□ -0.01
CLK3-216ENST00000564468 PADI3Q9ULW8 664 aa15□□□□□ -0.01
CLK3-216ENST00000564468 NLRC5Q86WI3 1866 aa14.99□□□□□ -0.01
CLK3-216ENST00000564468 STBD1O95210 358 aa14.99□□□□□ -0.01
CLK3-216ENST00000564468 VTNP04004 478 aa14.99□□□□□ -0.01
CLK3-216ENST00000564468 OR52Z1P0C646 297 aa14.99□□□□□ -0.01
CLK3-216ENST00000564468 MYOGP15173 224 aa14.99□□□□□ -0.01
CLK3-216ENST00000564468 CUL4AQ13619 759 aa14.99□□□□□ -0.01
CLK3-216ENST00000564468 TMEM266Q2M3C6 531 aa14.99□□□□□ -0.01
CLK3-216ENST00000564468 LARP1BQ659C4 914 aaKnown RBP14.99□□□□□ -0.01
CLK3-216ENST00000564468 ANO5Q75V66 913 aa14.99□□□□□ -0.01
CLK3-216ENST00000564468 LINC01465Q8N7H1 131 aa14.99□□□□□ -0.01
CLK3-216ENST00000564468 ADAMTS19Q8TE59 1207 aa14.99□□□□□ -0.01
CLK3-216ENST00000564468 SLC7A3Q8WY07 619 aa14.99□□□□□ -0.01
CLK3-216ENST00000564468 FAM122AQ96E09 287 aa14.99□□□□□ -0.01
CLK3-216ENST00000564468 DYDC2Q96IM9 177 aa14.99□□□□□ -0.01
CLK3-216ENST00000564468 CEP170P1Q96L14 293 aa14.99□□□□□ -0.01
CLK3-216ENST00000564468 UHRF1Q96T88 793 aaPredicted RBP14.99□□□□□ -0.01
CLK3-216ENST00000564468 EIF2AK1Q9BQI3 630 aaKnown RBP14.99□□□□□ -0.01
CLK3-216ENST00000564468 AGO3Q9H9G7 860 aaKnown RBP14.99□□□□□ -0.01
CLK3-216ENST00000564468 CYP26B1Q9NR63 512 aa14.99□□□□□ -0.01
CLK3-216ENST00000564468 RALGAPA2Q2PPJ7 1873 aa14.98□□□□□ -0.01
CLK3-216ENST00000564468 IGKV6-21A0A0C4DH24 114 aa14.98□□□□□ -0.01
CLK3-216ENST00000564468 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.98□□□□□ -0.01
CLK3-216ENST00000564468 LAD1O00515 517 aa14.98□□□□□ -0.01
CLK3-216ENST00000564468 WNT7AO00755 349 aa14.98□□□□□ -0.01
CLK3-216ENST00000564468 ENPP3O14638 875 aa14.98□□□□□ -0.01
CLK3-216ENST00000564468 GAS2O43903 313 aaKnown RBP14.98□□□□□ -0.01
CLK3-216ENST00000564468 GPR32O75388 356 aa14.98□□□□□ -0.01
CLK3-216ENST00000564468 MAFO75444 373 aaPredicted RBP14.98□□□□□ -0.01
CLK3-216ENST00000564468 SLITRK3O94933 977 aa14.98□□□□□ -0.01
CLK3-216ENST00000564468 LYPLA2O95372 231 aa14.98□□□□□ -0.01
CLK3-216ENST00000564468 PDCP20941 246 aa14.98□□□□□ -0.01
CLK3-216ENST00000564468 IGFBP4P22692 258 aa14.98□□□□□ -0.01
CLK3-216ENST00000564468 YWHABP31946 246 aaKnown RBP14.98□□□□□ -0.01
CLK3-216ENST00000564468 RFC5P40937 340 aa14.98□□□□□ -0.01
CLK3-216ENST00000564468 NLRP11P59045 1033 aaKnown RBP14.98□□□□□ -0.01
CLK3-216ENST00000564468 NFX1Q12986 1120 aaKnown RBP14.98□□□□□ -0.01
CLK3-216ENST00000564468 KIZQ2M2Z5 673 aa14.98□□□□□ -0.01
CLK3-216ENST00000564468 RILPL1Q5EBL4 403 aa14.98□□□□□ -0.01
CLK3-216ENST00000564468 FAM117BQ6P1L5 589 aa14.98□□□□□ -0.01
CLK3-216ENST00000564468 TPH2Q8IWU9 490 aa14.98□□□□□ -0.01
CLK3-216ENST00000564468 LRRC71Q8N4P6 559 aa14.98□□□□□ -0.01
CLK3-216ENST00000564468 ERMNQ8TAM6 284 aa14.98□□□□□ -0.01
CLK3-216ENST00000564468 SCLT1Q96NL6 688 aa14.98□□□□□ -0.01
CLK3-216ENST00000564468 YME1L1Q96TA2 773 aa14.98□□□□□ -0.01
CLK3-216ENST00000564468 RAB34Q9BZG1 259 aa14.98□□□□□ -0.01
CLK3-216ENST00000564468 TMEM60Q9H2L4 133 aa14.98□□□□□ -0.01
CLK3-216ENST00000564468 PRDM12Q9H4Q4 367 aa14.98□□□□□ -0.01
CLK3-216ENST00000564468 RGL1Q9NZL6 768 aa14.98□□□□□ -0.01
CLK3-216ENST00000564468 STK24Q9Y6E0 443 aa14.98□□□□□ -0.01
CLK3-216ENST00000564468 UPP2O95045 317 aa14.97□□□□□ -0.01
CLK3-216ENST00000564468 STAG3L1P0CL83 205 aa14.97□□□□□ -0.01
CLK3-216ENST00000564468 XRCC6P12956 609 aaKnown RBP eCLIP14.97□□□□□ -0.01
CLK3-216ENST00000564468 POLGP54098 1239 aaPredicted RBP14.97□□□□□ -0.01
CLK3-216ENST00000564468 HTRA4P83105 476 aaPredicted RBP14.97□□□□□ -0.01
CLK3-216ENST00000564468 CYP4A11Q02928 519 aa14.97□□□□□ -0.01
CLK3-216ENST00000564468 TAP1Q03518 808 aa14.97□□□□□ -0.01
CLK3-216ENST00000564468 CTTNQ14247 550 aaKnown RBP14.97□□□□□ -0.01
CLK3-216ENST00000564468 AAK1Q2M2I8 961 aa14.97□□□□□ -0.01
CLK3-216ENST00000564468 TMCO2Q7Z6W1 182 aaPredicted RBP14.97□□□□□ -0.01
CLK3-216ENST00000564468 TCP11Q8WWU5 503 aa14.97□□□□□ -0.01
CLK3-216ENST00000564468 CCDC43Q96MW1 224 aaKnown RBP14.97□□□□□ -0.01
CLK3-216ENST00000564468 CEP89Q96ST8 783 aa14.97□□□□□ -0.01
CLK3-216ENST00000564468 OSMRQ99650 979 aa14.97□□□□□ -0.01
CLK3-216ENST00000564468 HSD17B14Q9BPX1 270 aa14.97□□□□□ -0.01
CLK3-216ENST00000564468 C1QTNF1Q9BXJ1 281 aa14.97□□□□□ -0.01
CLK3-216ENST00000564468 GCOM2Q9BZD3 368 aaPredicted RBP14.97□□□□□ -0.01
CLK3-216ENST00000564468 INO80BQ9C086 356 aaPredicted RBP14.97□□□□□ -0.01
CLK3-216ENST00000564468 CDHR5Q9HBB8 845 aa14.97□□□□□ -0.01
CLK3-216ENST00000564468 ERVK-5Q9HDB9 667 aa14.97□□□□□ -0.01
CLK3-216ENST00000564468 TUFT1Q9NNX1 390 aa14.97□□□□□ -0.01
CLK3-216ENST00000564468 ANKEF1Q9NU02 776 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms