RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 NAP1L4Q99733 375 aaKnown RBP22.47■■□□□ 1.19
SHCBP1-203ENST00000564272 SH2D3AQ9BRG2 576 aa22.47■■□□□ 1.19
SHCBP1-203ENST00000564272 REV3LO60673 3130 aa22.46■■□□□ 1.19
SHCBP1-203ENST00000564272 RALGAPA2Q2PPJ7 1873 aa22.46■■□□□ 1.19
SHCBP1-203ENST00000564272 BTBD18B2RXH4 712 aa22.46■■□□□ 1.19
SHCBP1-203ENST00000564272 IBSPP21815 317 aaPredicted RBP22.46■■□□□ 1.19
SHCBP1-203ENST00000564272 CRYBB1P53674 252 aaPredicted RBP22.46■■□□□ 1.19
SHCBP1-203ENST00000564272 TBC1D8BQ0IIM8 1120 aa22.46■■□□□ 1.19
SHCBP1-203ENST00000564272 PPP2R5CQ13362 524 aa22.46■■□□□ 1.19
SHCBP1-203ENST00000564272 TRIM29Q14134 588 aa22.46■■□□□ 1.19
SHCBP1-203ENST00000564272 TARBP2Q15633 366 aaKnown RBP22.46■■□□□ 1.19
SHCBP1-203ENST00000564272 MTERF2Q49AM1 385 aa22.46■■□□□ 1.19
SHCBP1-203ENST00000564272 XKR3Q5GH77 459 aa22.46■■□□□ 1.19
SHCBP1-203ENST00000564272 FIBCD1Q8N539 461 aa22.46■■□□□ 1.19
SHCBP1-203ENST00000564272 ZNF668Q96K58 619 aaPredicted RBP22.46■■□□□ 1.19
SHCBP1-203ENST00000564272 FAM228AQ86W67 206 aa22.45■■□□□ 1.18
SHCBP1-203ENST00000564272 NPAS4Q8IUM7 802 aa22.45■■□□□ 1.18
SHCBP1-203ENST00000564272 TMEM192Q8IY95 271 aa22.45■■□□□ 1.18
SHCBP1-203ENST00000564272 ZNF689Q96CS4 500 aaPredicted RBP22.45■■□□□ 1.18
SHCBP1-203ENST00000564272 SAMD11Q96NU1 681 aa22.45■■□□□ 1.18
SHCBP1-203ENST00000564272 NIFKQ9BYG3 293 aaKnown RBP22.45■■□□□ 1.18
SHCBP1-203ENST00000564272 ST3GAL5Q9UNP4 418 aa22.45■■□□□ 1.18
SHCBP1-203ENST00000564272 WNT7AO00755 349 aa22.44■■□□□ 1.18
SHCBP1-203ENST00000564272 TBX3O15119 743 aa22.44■■□□□ 1.18
SHCBP1-203ENST00000564272 MARCH6O60337 910 aa22.44■■□□□ 1.18
SHCBP1-203ENST00000564272 DGKIO75912 1065 aa22.44■■□□□ 1.18
SHCBP1-203ENST00000564272 LINC00271P0C7V0 271 aa22.44■■□□□ 1.18
SHCBP1-203ENST00000564272 TMOD1P28289 359 aa22.44■■□□□ 1.18
SHCBP1-203ENST00000564272 NLRP11P59045 1033 aaKnown RBP22.44■■□□□ 1.18
SHCBP1-203ENST00000564272 PSMC5P62195 406 aa22.44■■□□□ 1.18
SHCBP1-203ENST00000564272 GUCY1B3Q02153 619 aa22.44■■□□□ 1.18
SHCBP1-203ENST00000564272 DRP2Q13474 957 aa22.44■■□□□ 1.18
SHCBP1-203ENST00000564272 TJAP1Q5JTD0 557 aa22.44■■□□□ 1.18
SHCBP1-203ENST00000564272 PLA2G4FQ68DD2 849 aa22.44■■□□□ 1.18
SHCBP1-203ENST00000564272 CRIPAKQ8N1N5 446 aa22.44■■□□□ 1.18
SHCBP1-203ENST00000564272 ATXN2LQ8WWM7 1075 aaKnown RBP22.44■■□□□ 1.18
SHCBP1-203ENST00000564272 CEP89Q96ST8 783 aa22.44■■□□□ 1.18
SHCBP1-203ENST00000564272 ADAMTS10Q9H324 1103 aa22.44■■□□□ 1.18
SHCBP1-203ENST00000564272 LMCD1Q9NZU5 365 aa22.44■■□□□ 1.18
SHCBP1-203ENST00000564272 DDX11L8A8MPP1 907 aa22.43■■□□□ 1.18
SHCBP1-203ENST00000564272 CTNNB1P35222 781 aa22.43■■□□□ 1.18
SHCBP1-203ENST00000564272 TFF2Q03403 129 aa22.43■■□□□ 1.18
SHCBP1-203ENST00000564272 BTG3Q14201 252 aaPredicted RBP22.43■■□□□ 1.18
SHCBP1-203ENST00000564272 NCAPH2Q6IBW4 605 aa22.43■■□□□ 1.18
SHCBP1-203ENST00000564272 ADAM2Q99965 735 aa22.43■■□□□ 1.18
SHCBP1-203ENST00000564272 DENND3A2RUS2 1198 aa22.42■■□□□ 1.18
SHCBP1-203ENST00000564272 GPR182O15218 404 aa22.42■■□□□ 1.18
SHCBP1-203ENST00000564272 QARSP47897 775 aaKnown RBP22.42■■□□□ 1.18
SHCBP1-203ENST00000564272 SARSP49591 514 aaKnown RBP22.42■■□□□ 1.18
SHCBP1-203ENST00000564272 RBM25P49756 843 aaKnown RBP22.42■■□□□ 1.18
SHCBP1-203ENST00000564272 GATMP50440 423 aa22.42■■□□□ 1.18
SHCBP1-203ENST00000564272 GPC3P51654 580 aa22.42■■□□□ 1.18
SHCBP1-203ENST00000564272 GPM6BQ13491 265 aa22.42■■□□□ 1.18
SHCBP1-203ENST00000564272 ODR4Q5SWX8 454 aa22.42■■□□□ 1.18
SHCBP1-203ENST00000564272 ANO5Q75V66 913 aa22.42■■□□□ 1.18
SHCBP1-203ENST00000564272 ZSCAN31Q96LW9 406 aaPredicted RBP22.42■■□□□ 1.18
SHCBP1-203ENST00000564272 SCLT1Q96NL6 688 aa22.42■■□□□ 1.18
SHCBP1-203ENST00000564272 ASB2Q96Q27 587 aa22.42■■□□□ 1.18
SHCBP1-203ENST00000564272 WRAP73Q9P2S5 460 aaPredicted RBP22.42■■□□□ 1.18
SHCBP1-203ENST00000564272 KIAA1671Q9BY89 1806 aa22.42■■□□□ 1.18
SHCBP1-203ENST00000564272 H3BNC9 293 aa22.41■■□□□ 1.18
SHCBP1-203ENST00000564272 STAG3L1P0CL83 205 aa22.41■■□□□ 1.18
SHCBP1-203ENST00000564272 MRPS5P82675 430 aaKnown RBP22.41■■□□□ 1.18
SHCBP1-203ENST00000564272 SPIRE1Q08AE8 756 aa22.41■■□□□ 1.18
SHCBP1-203ENST00000564272 PAN2Q504Q3 1202 aaKnown RBP22.41■■□□□ 1.18
SHCBP1-203ENST00000564272 SLFN12Q8IYM2 578 aa22.41■■□□□ 1.18
SHCBP1-203ENST00000564272 C8orf76Q96K31 380 aa22.41■■□□□ 1.18
SHCBP1-203ENST00000564272 LLPHQ9BRT6 129 aaKnown RBP22.41■■□□□ 1.18
SHCBP1-203ENST00000564272 RGS18Q9NS28 235 aa22.41■■□□□ 1.18
SHCBP1-203ENST00000564272 LRFN2Q9ULH4 789 aa22.41■■□□□ 1.18
SHCBP1-203ENST00000564272 MRPL42Q9Y6G3 142 aaKnown RBP22.41■■□□□ 1.18
SHCBP1-203ENST00000564272 IGKV6-21A0A0C4DH24 114 aa22.4■■□□□ 1.18
SHCBP1-203ENST00000564272 BAG4O95429 457 aaKnown RBP22.4■■□□□ 1.18
SHCBP1-203ENST00000564272 CALCRLQ16602 461 aa22.4■■□□□ 1.18
SHCBP1-203ENST00000564272 CMTR2Q8IYT2 770 aaKnown RBP22.4■■□□□ 1.18
SHCBP1-203ENST00000564272 NLRP7Q8WX94 980 aa22.4■■□□□ 1.18
SHCBP1-203ENST00000564272 CLP1Q92989 425 aaKnown RBP22.4■■□□□ 1.18
SHCBP1-203ENST00000564272 MRPL38Q96DV4 380 aaKnown RBP22.4■■□□□ 1.18
SHCBP1-203ENST00000564272 LXNQ9BS40 222 aa22.4■■□□□ 1.18
SHCBP1-203ENST00000564272 SH2B1Q9NRF2 756 aaPredicted RBP22.4■■□□□ 1.18
SHCBP1-203ENST00000564272 C1orf112Q9NSG2 853 aa22.4■■□□□ 1.18
SHCBP1-203ENST00000564272 VCANP13611 3396 aa22.39■■□□□ 1.18
SHCBP1-203ENST00000564272 C9IYK1 514 aa22.39■■□□□ 1.17
SHCBP1-203ENST00000564272 C5orf67F2Z3F1 127 aa22.39■■□□□ 1.17
SHCBP1-203ENST00000564272 P4HBP07237 508 aaKnown RBP22.39■■□□□ 1.17
SHCBP1-203ENST00000564272 EIF4BP23588 611 aaKnown RBP22.39■■□□□ 1.17
SHCBP1-203ENST00000564272 BMPR1AP36894 532 aa22.39■■□□□ 1.17
SHCBP1-203ENST00000564272 NPEPPSP55786 919 aa22.39■■□□□ 1.17
SHCBP1-203ENST00000564272 CYP4A11Q02928 519 aa22.39■■□□□ 1.17
SHCBP1-203ENST00000564272 DSC3Q14574 896 aa22.39■■□□□ 1.17
SHCBP1-203ENST00000564272 EPHA7Q15375 998 aa22.39■■□□□ 1.17
SHCBP1-203ENST00000564272 ZNF579Q8NAF0 562 aaKnown RBP22.39■■□□□ 1.17
SHCBP1-203ENST00000564272 DYDC2Q96IM9 177 aa22.39■■□□□ 1.17
SHCBP1-203ENST00000564272 CYP26B1Q9NR63 512 aa22.39■■□□□ 1.17
SHCBP1-203ENST00000564272 RGL1Q9NZL6 768 aa22.39■■□□□ 1.17
SHCBP1-203ENST00000564272 ATG2AQ2TAZ0 1938 aa22.39■■□□□ 1.17
SHCBP1-203ENST00000564272 NEMFO60524 1076 aa22.38■■□□□ 1.17
SHCBP1-203ENST00000564272 DARSP14868 501 aaKnown RBP22.38■■□□□ 1.17
SHCBP1-203ENST00000564272 ATP2B1P20020 1258 aa22.38■■□□□ 1.17
SHCBP1-203ENST00000564272 FGFR4P22455 802 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms