RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 SCAND2PQ9GZW5 306 aaPredicted RBP18.61■□□□□ 0.57
RNF40-206ENST00000564260 ZDHHC9Q9Y397 364 aa18.61■□□□□ 0.57
RNF40-206ENST00000564260 TRPV2Q9Y5S1 764 aa18.61■□□□□ 0.57
RNF40-206ENST00000564260 CEP290O15078 2479 aa18.61■□□□□ 0.57
RNF40-206ENST00000564260 TANC1Q9C0D5 1861 aa18.6■□□□□ 0.57
RNF40-206ENST00000564260 POTEGQ6S5H5 508 aa18.6■□□□□ 0.57
RNF40-206ENST00000564260 ZNF410Q86VK4 478 aa18.6■□□□□ 0.57
RNF40-206ENST00000564260 CDK5RAP3Q96JB5 506 aa18.6■□□□□ 0.57
RNF40-206ENST00000564260 CELF4Q9BZC1 486 aaKnown RBP18.6■□□□□ 0.57
RNF40-206ENST00000564260 ATP6V0A4Q9HBG4 840 aa18.6■□□□□ 0.57
RNF40-206ENST00000564260 KAT6AQ92794 2004 aa18.6■□□□□ 0.57
RNF40-206ENST00000564260 EYA4O95677 639 aa18.59■□□□□ 0.57
RNF40-206ENST00000564260 CRYBB1P53674 252 aaPredicted RBP18.59■□□□□ 0.57
RNF40-206ENST00000564260 POU5F1BQ06416 359 aa18.59■□□□□ 0.57
RNF40-206ENST00000564260 MXD4Q14582 209 aaPredicted RBP18.59■□□□□ 0.57
RNF40-206ENST00000564260 PCBP1Q15365 356 aaKnown RBP eCLIP18.59■□□□□ 0.57
RNF40-206ENST00000564260 PLA2G4FQ68DD2 849 aa18.59■□□□□ 0.57
RNF40-206ENST00000564260 CNKSR3Q6P9H4 555 aa18.59■□□□□ 0.57
RNF40-206ENST00000564260 CABP7Q86V35 215 aa18.59■□□□□ 0.57
RNF40-206ENST00000564260 TDHQ8IZJ6 230 aa18.59■□□□□ 0.57
RNF40-206ENST00000564260 PSPC1Q8WXF1 523 aaKnown RBP18.59■□□□□ 0.57
RNF40-206ENST00000564260 MTRQ99707 1265 aa18.59■□□□□ 0.57
RNF40-206ENST00000564260 FTOQ9C0B1 505 aaKnown RBP eCLIP18.59■□□□□ 0.57
RNF40-206ENST00000564260 FAM49AQ9H0Q0 323 aaPredicted RBP18.59■□□□□ 0.57
RNF40-206ENST00000564260 DDX19AQ9NUU7 478 aaKnown RBP18.59■□□□□ 0.57
RNF40-206ENST00000564260 CCDC39Q9UFE4 941 aa18.59■□□□□ 0.57
RNF40-206ENST00000564260 RCOR1Q9UKL0 485 aa18.59■□□□□ 0.57
RNF40-206ENST00000564260 KIAA1024Q9UPX6 916 aa18.59■□□□□ 0.57
RNF40-206ENST00000564260 WDR81Q562E7 1941 aa18.59■□□□□ 0.57
RNF40-206ENST00000564260 ARHGEF35A5YM69 484 aa18.58■□□□□ 0.56
RNF40-206ENST00000564260 CUTAO60888 179 aa18.58■□□□□ 0.56
RNF40-206ENST00000564260 CHRNA1P02708 482 aa18.58■□□□□ 0.56
RNF40-206ENST00000564260 NPEPPSP55786 919 aa18.58■□□□□ 0.56
RNF40-206ENST00000564260 EMC2Q15006 297 aa18.58■□□□□ 0.56
RNF40-206ENST00000564260 TMEM119Q4V9L6 283 aa18.58■□□□□ 0.56
RNF40-206ENST00000564260 PLEKHG4Q58EX7 1191 aa18.58■□□□□ 0.56
RNF40-206ENST00000564260 CHRDL2Q6WN34 429 aa18.58■□□□□ 0.56
RNF40-206ENST00000564260 TSHZ1Q6ZSZ6 1077 aa18.58■□□□□ 0.56
RNF40-206ENST00000564260 TRMT1LQ7Z2T5 733 aaKnown RBP18.58■□□□□ 0.56
RNF40-206ENST00000564260 HERVK_113Q902F9 699 aa18.58■□□□□ 0.56
RNF40-206ENST00000564260 SCLYQ96I15 445 aa18.58■□□□□ 0.56
RNF40-206ENST00000564260 PYM1Q9BRP8 204 aaKnown RBP18.58■□□□□ 0.56
RNF40-206ENST00000564260 INO80BQ9C086 356 aaPredicted RBP18.58■□□□□ 0.56
RNF40-206ENST00000564260 SUGCTQ9HAC7 445 aa18.58■□□□□ 0.56
RNF40-206ENST00000564260 KCNG1Q9UIX4 513 aa18.58■□□□□ 0.56
RNF40-206ENST00000564260 AKT3Q9Y243 479 aa18.58■□□□□ 0.56
RNF40-206ENST00000564260 CDY2AQ9Y6F7 541 aa18.58■□□□□ 0.56
RNF40-206ENST00000564260 ABHD14A-ACY1A0A1B0GW23 586 aa18.57■□□□□ 0.56
RNF40-206ENST00000564260 NBNO60934 754 aa18.57■□□□□ 0.56
RNF40-206ENST00000564260 FGBP02675 491 aa18.57■□□□□ 0.56
RNF40-206ENST00000564260 MARCKSP29966 332 aaPredicted RBP18.57■□□□□ 0.56
RNF40-206ENST00000564260 CLCN3P51790 818 aa18.57■□□□□ 0.56
RNF40-206ENST00000564260 CEBPZQ03701 1054 aaKnown RBP18.57■□□□□ 0.56
RNF40-206ENST00000564260 DNM1Q05193 864 aaKnown RBP18.57■□□□□ 0.56
RNF40-206ENST00000564260 FBXO47Q5MNV8 452 aa18.57■□□□□ 0.56
RNF40-206ENST00000564260 TMEM240Q5SV17 173 aa18.57■□□□□ 0.56
RNF40-206ENST00000564260 PIGOQ8TEQ8 1089 aa18.57■□□□□ 0.56
RNF40-206ENST00000564260 SEPT8Q92599 483 aa18.57■□□□□ 0.56
RNF40-206ENST00000564260 FTHL17Q9BXU8 183 aa18.57■□□□□ 0.56
RNF40-206ENST00000564260 CSRNP2Q9H175 543 aa18.57■□□□□ 0.56
RNF40-206ENST00000564260 STK17AQ9UEE5 414 aa18.57■□□□□ 0.56
RNF40-206ENST00000564260 TMEM150BA6NC51 233 aa18.56■□□□□ 0.56
RNF40-206ENST00000564260 PP2D1A8MPX8 630 aa18.56■□□□□ 0.56
RNF40-206ENST00000564260 GPR32O75388 356 aa18.56■□□□□ 0.56
RNF40-206ENST00000564260 CTSHP09668 335 aa18.56■□□□□ 0.56
RNF40-206ENST00000564260 CYP11B2P19099 503 aa18.56■□□□□ 0.56
RNF40-206ENST00000564260 GPC3P51654 580 aa18.56■□□□□ 0.56
RNF40-206ENST00000564260 MBTPS1Q14703 1052 aa18.56■□□□□ 0.56
RNF40-206ENST00000564260 GPNMBQ14956 572 aa18.56■□□□□ 0.56
RNF40-206ENST00000564260 RASIP1Q5U651 963 aa18.56■□□□□ 0.56
RNF40-206ENST00000564260 FOXD4L5Q5VV16 416 aaPredicted RBP18.56■□□□□ 0.56
RNF40-206ENST00000564260 CCDC73Q6ZRK6 1079 aa18.56■□□□□ 0.56
RNF40-206ENST00000564260 LRRC71Q8N4P6 559 aa18.56■□□□□ 0.56
RNF40-206ENST00000564260 FOXD4L4Q8WXT5 416 aaPredicted RBP18.56■□□□□ 0.56
RNF40-206ENST00000564260 NFKBIZQ9BYH8 718 aa18.56■□□□□ 0.56
RNF40-206ENST00000564260 BHMT2Q9H2M3 363 aa18.56■□□□□ 0.56
RNF40-206ENST00000564260 RNF216Q9NWF9 866 aaPredicted RBP18.56■□□□□ 0.56
RNF40-206ENST00000564260 SUCLA2Q9P2R7 463 aaPredicted RBP18.56■□□□□ 0.56
RNF40-206ENST00000564260 TFIP11Q9UBB9 837 aaKnown RBP18.56■□□□□ 0.56
RNF40-206ENST00000564260 PHLPP2Q6ZVD8 1323 aa18.55■□□□□ 0.56
RNF40-206ENST00000564260 MYH15Q9Y2K3 1946 aa18.55■□□□□ 0.56
RNF40-206ENST00000564260 GPR182O15218 404 aa18.55■□□□□ 0.56
RNF40-206ENST00000564260 EIF4BP23588 611 aaKnown RBP18.55■□□□□ 0.56
RNF40-206ENST00000564260 CDC25AP30304 524 aa18.55■□□□□ 0.56
RNF40-206ENST00000564260 GRB10Q13322 594 aa18.55■□□□□ 0.56
RNF40-206ENST00000564260 MKRN4PQ13434 485 aaPredicted RBP18.55■□□□□ 0.56
RNF40-206ENST00000564260 IKBKEQ14164 716 aa18.55■□□□□ 0.56
RNF40-206ENST00000564260 TFDP1Q14186 410 aa18.55■□□□□ 0.56
RNF40-206ENST00000564260 ECM1Q16610 540 aa18.55■□□□□ 0.56
RNF40-206ENST00000564260 LRIT3Q3SXY7 679 aa18.55■□□□□ 0.56
RNF40-206ENST00000564260 PADI6Q6TGC4 694 aa18.55■□□□□ 0.56
RNF40-206ENST00000564260 C16orf59Q7L2K0 433 aa18.55■□□□□ 0.56
RNF40-206ENST00000564260 SYT2Q8N9I0 419 aaPredicted RBP18.55■□□□□ 0.56
RNF40-206ENST00000564260 RASSF8Q8NHQ8 419 aa18.55■□□□□ 0.56
RNF40-206ENST00000564260 PHOSPHO2Q8TCD6 241 aa18.55■□□□□ 0.56
RNF40-206ENST00000564260 SYMPKQ92797 1274 aaKnown RBP18.55■□□□□ 0.56
RNF40-206ENST00000564260 KIFAP3Q92845 792 aa18.55■□□□□ 0.56
RNF40-206ENST00000564260 VWCEQ96DN2 955 aa18.55■□□□□ 0.56
RNF40-206ENST00000564260 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.55■□□□□ 0.562e-8■■□□□ 12.7
RNF40-206ENST00000564260 IFIH1Q9BYX4 1025 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms