RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 LXNQ9BS40 222 aa15□□□□□ -0.01
CLK3-213ENST00000563842 OSBPL7Q9BZF2 842 aa15□□□□□ -0.01
CLK3-213ENST00000563842 PADI3Q9ULW8 664 aa15□□□□□ -0.01
CLK3-213ENST00000563842 UNC80Q8N2C7 3258 aa15□□□□□ -0.01
CLK3-213ENST00000563842 NLRC5Q86WI3 1866 aa14.99□□□□□ -0.01
CLK3-213ENST00000563842 STBD1O95210 358 aa14.99□□□□□ -0.01
CLK3-213ENST00000563842 VTNP04004 478 aa14.99□□□□□ -0.01
CLK3-213ENST00000563842 OR52Z1P0C646 297 aa14.99□□□□□ -0.01
CLK3-213ENST00000563842 MYOGP15173 224 aa14.99□□□□□ -0.01
CLK3-213ENST00000563842 CUL4AQ13619 759 aa14.99□□□□□ -0.01
CLK3-213ENST00000563842 GRIN2CQ14957 1233 aa14.99□□□□□ -0.01
CLK3-213ENST00000563842 TMEM266Q2M3C6 531 aa14.99□□□□□ -0.01
CLK3-213ENST00000563842 LARP1BQ659C4 914 aaKnown RBP14.99□□□□□ -0.01
CLK3-213ENST00000563842 ANO5Q75V66 913 aa14.99□□□□□ -0.01
CLK3-213ENST00000563842 LINC01465Q8N7H1 131 aa14.99□□□□□ -0.01
CLK3-213ENST00000563842 SLC7A3Q8WY07 619 aa14.99□□□□□ -0.01
CLK3-213ENST00000563842 DYDC2Q96IM9 177 aa14.99□□□□□ -0.01
CLK3-213ENST00000563842 CEP170P1Q96L14 293 aa14.99□□□□□ -0.01
CLK3-213ENST00000563842 EIF2AK1Q9BQI3 630 aaKnown RBP14.99□□□□□ -0.01
CLK3-213ENST00000563842 AGO3Q9H9G7 860 aaKnown RBP14.99□□□□□ -0.01
CLK3-213ENST00000563842 PRDM6Q9NQX0 595 aa14.99□□□□□ -0.01
CLK3-213ENST00000563842 CYP26B1Q9NR63 512 aa14.99□□□□□ -0.01
CLK3-213ENST00000563842 RALGAPA2Q2PPJ7 1873 aa14.98□□□□□ -0.01
CLK3-213ENST00000563842 IGKV6-21A0A0C4DH24 114 aa14.98□□□□□ -0.01
CLK3-213ENST00000563842 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.98□□□□□ -0.01
CLK3-213ENST00000563842 LAD1O00515 517 aa14.98□□□□□ -0.01
CLK3-213ENST00000563842 WNT7AO00755 349 aa14.98□□□□□ -0.01
CLK3-213ENST00000563842 ENPP3O14638 875 aa14.98□□□□□ -0.01
CLK3-213ENST00000563842 GAS2O43903 313 aaKnown RBP14.98□□□□□ -0.01
CLK3-213ENST00000563842 GPR32O75388 356 aa14.98□□□□□ -0.01
CLK3-213ENST00000563842 MAFO75444 373 aaPredicted RBP14.98□□□□□ -0.01
CLK3-213ENST00000563842 SLITRK3O94933 977 aa14.98□□□□□ -0.01
CLK3-213ENST00000563842 LYPLA2O95372 231 aa14.98□□□□□ -0.01
CLK3-213ENST00000563842 FOSL2P15408 326 aa14.98□□□□□ -0.01
CLK3-213ENST00000563842 PDCP20941 246 aa14.98□□□□□ -0.01
CLK3-213ENST00000563842 YWHABP31946 246 aaKnown RBP14.98□□□□□ -0.01
CLK3-213ENST00000563842 RFC5P40937 340 aa14.98□□□□□ -0.01
CLK3-213ENST00000563842 NLRP11P59045 1033 aaKnown RBP14.98□□□□□ -0.01
CLK3-213ENST00000563842 NFX1Q12986 1120 aaKnown RBP14.98□□□□□ -0.01
CLK3-213ENST00000563842 KIZQ2M2Z5 673 aa14.98□□□□□ -0.01
CLK3-213ENST00000563842 RILPL1Q5EBL4 403 aa14.98□□□□□ -0.01
CLK3-213ENST00000563842 FAM117BQ6P1L5 589 aa14.98□□□□□ -0.01
CLK3-213ENST00000563842 TPH2Q8IWU9 490 aa14.98□□□□□ -0.01
CLK3-213ENST00000563842 LRRC71Q8N4P6 559 aa14.98□□□□□ -0.01
CLK3-213ENST00000563842 ERMNQ8TAM6 284 aa14.98□□□□□ -0.01
CLK3-213ENST00000563842 MYLIPQ8WY64 445 aa14.98□□□□□ -0.01
CLK3-213ENST00000563842 SCLT1Q96NL6 688 aa14.98□□□□□ -0.01
CLK3-213ENST00000563842 YME1L1Q96TA2 773 aa14.98□□□□□ -0.01
CLK3-213ENST00000563842 RAB34Q9BZG1 259 aa14.98□□□□□ -0.01
CLK3-213ENST00000563842 TMEM60Q9H2L4 133 aa14.98□□□□□ -0.01
CLK3-213ENST00000563842 RGL1Q9NZL6 768 aa14.98□□□□□ -0.01
CLK3-213ENST00000563842 STK24Q9Y6E0 443 aa14.98□□□□□ -0.01
CLK3-213ENST00000563842 UPP2O95045 317 aa14.97□□□□□ -0.01
CLK3-213ENST00000563842 STAG3L1P0CL83 205 aa14.97□□□□□ -0.01
CLK3-213ENST00000563842 XRCC6P12956 609 aaKnown RBP eCLIP14.97□□□□□ -0.01
CLK3-213ENST00000563842 POLGP54098 1239 aaPredicted RBP14.97□□□□□ -0.01
CLK3-213ENST00000563842 HTRA4P83105 476 aaPredicted RBP14.97□□□□□ -0.01
CLK3-213ENST00000563842 CYP4A11Q02928 519 aa14.97□□□□□ -0.01
CLK3-213ENST00000563842 TAP1Q03518 808 aa14.97□□□□□ -0.01
CLK3-213ENST00000563842 CTTNQ14247 550 aaKnown RBP14.97□□□□□ -0.01
CLK3-213ENST00000563842 TMCO2Q7Z6W1 182 aaPredicted RBP14.97□□□□□ -0.01
CLK3-213ENST00000563842 TCP11Q8WWU5 503 aa14.97□□□□□ -0.01
CLK3-213ENST00000563842 CCDC43Q96MW1 224 aaKnown RBP14.97□□□□□ -0.01
CLK3-213ENST00000563842 CEP89Q96ST8 783 aa14.97□□□□□ -0.01
CLK3-213ENST00000563842 OSMRQ99650 979 aa14.97□□□□□ -0.01
CLK3-213ENST00000563842 HSD17B14Q9BPX1 270 aa14.97□□□□□ -0.01
CLK3-213ENST00000563842 GCOM2Q9BZD3 368 aaPredicted RBP14.97□□□□□ -0.01
CLK3-213ENST00000563842 INO80BQ9C086 356 aaPredicted RBP14.97□□□□□ -0.01
CLK3-213ENST00000563842 PRDM12Q9H4Q4 367 aa14.97□□□□□ -0.01
CLK3-213ENST00000563842 CDHR5Q9HBB8 845 aa14.97□□□□□ -0.01
CLK3-213ENST00000563842 ERVK-5Q9HDB9 667 aa14.97□□□□□ -0.01
CLK3-213ENST00000563842 TUFT1Q9NNX1 390 aa14.97□□□□□ -0.01
CLK3-213ENST00000563842 ANKEF1Q9NU02 776 aa14.97□□□□□ -0.01
CLK3-213ENST00000563842 NOC2LQ9Y3T9 749 aaKnown RBP14.97□□□□□ -0.01
CLK3-213ENST00000563842 DENND3A2RUS2 1198 aa14.96□□□□□ -0.01
CLK3-213ENST00000563842 MUTP22033 750 aa14.96□□□□□ -0.01
CLK3-213ENST00000563842 EIF4BP23588 611 aaKnown RBP14.96□□□□□ -0.01
CLK3-213ENST00000563842 TECP42680 631 aa14.96□□□□□ -0.01
CLK3-213ENST00000563842 GPC3P51654 580 aa14.96□□□□□ -0.01
CLK3-213ENST00000563842 XKR9Q5GH70 373 aa14.96□□□□□ -0.01
CLK3-213ENST00000563842 HAUS3Q68CZ6 603 aa14.96□□□□□ -0.01
CLK3-213ENST00000563842 PLA2G4FQ68DD2 849 aa14.96□□□□□ -0.01
CLK3-213ENST00000563842 ZNF410Q86VK4 478 aa14.96□□□□□ -0.01
CLK3-213ENST00000563842 NLRP7Q8WX94 980 aa14.96□□□□□ -0.01
CLK3-213ENST00000563842 INTS4Q96HW7 963 aaKnown RBP14.96□□□□□ -0.01
CLK3-213ENST00000563842 SAMD11Q96NU1 681 aa14.96□□□□□ -0.01
CLK3-213ENST00000563842 TGS1Q96RS0 853 aaKnown RBP14.96□□□□□ -0.01
CLK3-213ENST00000563842 PPP1R16BQ96T49 567 aa14.96□□□□□ -0.01
CLK3-213ENST00000563842 TSPYL2Q9H2G4 693 aaPredicted RBP14.96□□□□□ -0.01
CLK3-213ENST00000563842 ADAMTS10Q9H324 1103 aa14.96□□□□□ -0.01
CLK3-213ENST00000563842 C1orf112Q9NSG2 853 aa14.96□□□□□ -0.01
CLK3-213ENST00000563842 SUCLA2Q9P2R7 463 aaPredicted RBP14.96□□□□□ -0.01
CLK3-213ENST00000563842 WRAP73Q9P2S5 460 aaPredicted RBP14.96□□□□□ -0.01
CLK3-213ENST00000563842 ST3GAL5Q9UNP4 418 aa14.96□□□□□ -0.01
CLK3-213ENST00000563842 TMEM150BA6NC51 233 aa14.95□□□□□ -0.02
CLK3-213ENST00000563842 POTEMA6NI47 508 aa14.95□□□□□ -0.02
CLK3-213ENST00000563842 ASAP2O43150 1006 aa14.95□□□□□ -0.02
CLK3-213ENST00000563842 ZSCAN20P17040 1043 aaPredicted RBP14.95□□□□□ -0.02
CLK3-213ENST00000563842 FXR2P51116 673 aaKnown RBP eCLIP14.95□□□□□ -0.02
CLK3-213ENST00000563842 NPEPPSP55786 919 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms