RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 SLC30A1Q9Y6M5 507 aa5.02□□□□□ -1.61
HMGB1P33-201ENST00000563485 B4E1Z4 1266 aa5.01□□□□□ -1.61
HMGB1P33-201ENST00000563485 TRAF5O00463 557 aa5.01□□□□□ -1.61
HMGB1P33-201ENST00000563485 AMHP03971 560 aa5.01□□□□□ -1.61
HMGB1P33-201ENST00000563485 SDSP20132 328 aa5.01□□□□□ -1.61
HMGB1P33-201ENST00000563485 ACO1P21399 889 aaKnown RBP5.01□□□□□ -1.61
HMGB1P33-201ENST00000563485 COMTP21964 271 aa5.01□□□□□ -1.61
HMGB1P33-201ENST00000563485 KIF11P52732 1056 aa5.01□□□□□ -1.61
HMGB1P33-201ENST00000563485 PRKD1Q15139 912 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P33-201ENST00000563485 ARHGAP44Q17R89 818 aa5.01□□□□□ -1.61
HMGB1P33-201ENST00000563485 PIK3R6Q5UE93 754 aa5.01□□□□□ -1.61
HMGB1P33-201ENST00000563485 Q6ZSN1 163 aa5.01□□□□□ -1.61
HMGB1P33-201ENST00000563485 POLNQ7Z5Q5 900 aa5.01□□□□□ -1.61
HMGB1P33-201ENST00000563485 SLC16A11Q8NCK7 471 aa5.01□□□□□ -1.61
HMGB1P33-201ENST00000563485 FOXB1Q99853 325 aa5.01□□□□□ -1.61
HMGB1P33-201ENST00000563485 SCAND2PQ9GZW5 306 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P33-201ENST00000563485 PTPDC1A2A3K4 754 aa5□□□□□ -1.61
HMGB1P33-201ENST00000563485 MAFO75444 373 aaPredicted RBP5□□□□□ -1.61
HMGB1P33-201ENST00000563485 ASMTLO95671 621 aa5□□□□□ -1.61
HMGB1P33-201ENST00000563485 PRLP01236 227 aa5□□□□□ -1.61
HMGB1P33-201ENST00000563485 FNTBP49356 437 aa5□□□□□ -1.61
HMGB1P33-201ENST00000563485 RGS3P49796 1198 aa5□□□□□ -1.61
HMGB1P33-201ENST00000563485 SLC6A3Q01959 620 aa5□□□□□ -1.61
HMGB1P33-201ENST00000563485 HGFACQ04756 655 aa5□□□□□ -1.61
HMGB1P33-201ENST00000563485 CCDC144BQ3MJ40 725 aa5□□□□□ -1.61
HMGB1P33-201ENST00000563485 GPR135Q8IZ08 494 aa5□□□□□ -1.61
HMGB1P33-201ENST00000563485 EDAQ92838 391 aa5□□□□□ -1.61
HMGB1P33-201ENST00000563485 TMEM260Q9NX78 707 aa5□□□□□ -1.61
HMGB1P33-201ENST00000563485 MAGEL2Q9UJ55 1249 aa5□□□□□ -1.61
HMGB1P33-201ENST00000563485 CBX4O00257 560 aa4.99□□□□□ -1.61
HMGB1P33-201ENST00000563485 RPS19P39019 145 aaKnown RBP4.99□□□□□ -1.61
HMGB1P33-201ENST00000563485 MAP3K12Q12852 859 aa4.99□□□□□ -1.61
HMGB1P33-201ENST00000563485 FOXL1Q12952 345 aa4.99□□□□□ -1.61
HMGB1P33-201ENST00000563485 ADAM15Q13444 863 aa4.99□□□□□ -1.61
HMGB1P33-201ENST00000563485 MAMDC4Q6UXC1 1216 aa4.99□□□□□ -1.61
HMGB1P33-201ENST00000563485 ZNF808Q8N4W9 903 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P33-201ENST00000563485 KIAA1958Q8N8K9 716 aa4.99□□□□□ -1.61
HMGB1P33-201ENST00000563485 PCIF1Q9H4Z3 704 aa4.99□□□□□ -1.61
HMGB1P33-201ENST00000563485 PIF1Q9H611 641 aa4.99□□□□□ -1.61
HMGB1P33-201ENST00000563485 CABP5Q9NP86 173 aa4.99□□□□□ -1.61
HMGB1P33-201ENST00000563485 SRRDQ9UH36 339 aa4.99□□□□□ -1.61
HMGB1P33-201ENST00000563485 H7C1D1 291 aa4.98□□□□□ -1.61
HMGB1P33-201ENST00000563485 SLC26A4O43511 780 aa4.98□□□□□ -1.61
HMGB1P33-201ENST00000563485 JMJD7P0C870 316 aa4.98□□□□□ -1.61
HMGB1P33-201ENST00000563485 PTX3P26022 381 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P33-201ENST00000563485 MSX2P35548 267 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P33-201ENST00000563485 STAT3P40763 770 aa4.98□□□□□ -1.61
HMGB1P33-201ENST00000563485 RANGAP1P46060 587 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P33-201ENST00000563485 ANTXR2P58335 489 aa4.98□□□□□ -1.61
HMGB1P33-201ENST00000563485 ROM1Q03395 351 aa4.98□□□□□ -1.61
HMGB1P33-201ENST00000563485 PABPC4Q13310 644 aaKnown RBP eCLIP4.98□□□□□ -1.61
HMGB1P33-201ENST00000563485 NRN1LQ496H8 165 aa4.98□□□□□ -1.61
HMGB1P33-201ENST00000563485 USP39Q53GS9 565 aaKnown RBP4.98□□□□□ -1.61
HMGB1P33-201ENST00000563485 CDCA2Q69YH5 1023 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P33-201ENST00000563485 RNF207Q6ZRF8 634 aa4.98□□□□□ -1.61
HMGB1P33-201ENST00000563485 SHCBP1Q8NEM2 672 aa4.98□□□□□ -1.61
HMGB1P33-201ENST00000563485 OR5AN1Q8NGI8 311 aa4.98□□□□□ -1.61
HMGB1P33-201ENST00000563485 UBXN4Q92575 508 aa4.98□□□□□ -1.61
HMGB1P33-201ENST00000563485 EXTL1Q92935 676 aa4.98□□□□□ -1.61
HMGB1P33-201ENST00000563485 E2F7Q96AV8 911 aa4.98□□□□□ -1.61
HMGB1P33-201ENST00000563485 MAML3Q96JK9 1138 aa4.98□□□□□ -1.61
HMGB1P33-201ENST00000563485 DRC1Q96MC2 740 aa4.98□□□□□ -1.61
HMGB1P33-201ENST00000563485 AGO3Q9H9G7 860 aaKnown RBP4.98□□□□□ -1.61
HMGB1P33-201ENST00000563485 MSL2Q9HCI7 577 aa4.98□□□□□ -1.61
HMGB1P33-201ENST00000563485 ACSS2Q9NR19 701 aa4.98□□□□□ -1.61
HMGB1P33-201ENST00000563485 PLA2G3Q9NZ20 509 aa4.98□□□□□ -1.61
HMGB1P33-201ENST00000563485 B4GALT6Q9UBX8 382 aa4.98□□□□□ -1.61
HMGB1P33-201ENST00000563485 CTDP1Q9Y5B0 961 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P33-201ENST00000563485 UBA6A0AVT1 1052 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P33-201ENST00000563485 ACVRL1P37023 503 aa4.97□□□□□ -1.61
HMGB1P33-201ENST00000563485 GDF5P43026 501 aa4.97□□□□□ -1.61
HMGB1P33-201ENST00000563485 SAFB2Q14151 953 aaKnown RBP eCLIP4.97□□□□□ -1.61
HMGB1P33-201ENST00000563485 ACAP1Q15027 740 aa4.97□□□□□ -1.61
HMGB1P33-201ENST00000563485 CREB3L3Q68CJ9 461 aa4.97□□□□□ -1.61
HMGB1P33-201ENST00000563485 SLFN12LQ6IEE8 588 aa4.97□□□□□ -1.61
HMGB1P33-201ENST00000563485 KLHDC10Q6PID8 442 aa4.97□□□□□ -1.61
HMGB1P33-201ENST00000563485 FAM89AQ96GI7 184 aa4.97□□□□□ -1.61
HMGB1P33-201ENST00000563485 TMEM176AQ96HP8 235 aa4.97□□□□□ -1.61
HMGB1P33-201ENST00000563485 C16orf92Q96LL3 132 aa4.97□□□□□ -1.61
HMGB1P33-201ENST00000563485 SAE1Q9UBE0 346 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P33-201ENST00000563485 PLSCR1O15162 318 aa4.96□□□□□ -1.62
HMGB1P33-201ENST00000563485 FZD7O75084 574 aa4.96□□□□□ -1.62
HMGB1P33-201ENST00000563485 RFPL3O75679 317 aa4.96□□□□□ -1.62
HMGB1P33-201ENST00000563485 SLPIP03973 132 aa4.96□□□□□ -1.62
HMGB1P33-201ENST00000563485 CYP17A1P05093 508 aa4.96□□□□□ -1.62
HMGB1P33-201ENST00000563485 SLC9A1P19634 815 aa4.96□□□□□ -1.62
HMGB1P33-201ENST00000563485 FLT3P36888 993 aa4.96□□□□□ -1.62
HMGB1P33-201ENST00000563485 ATP2C1P98194 919 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P33-201ENST00000563485 FOXE3Q13461 319 aa4.96□□□□□ -1.62
HMGB1P33-201ENST00000563485 RIN1Q13671 783 aa4.96□□□□□ -1.62
HMGB1P33-201ENST00000563485 GRM7Q14831 915 aa4.96□□□□□ -1.62
HMGB1P33-201ENST00000563485 ZNF174Q15697 407 aa4.96□□□□□ -1.62
HMGB1P33-201ENST00000563485 DGKDQ16760 1214 aa4.96□□□□□ -1.62
HMGB1P33-201ENST00000563485 C21orf62-AS1Q17RA5 79 aa4.96□□□□□ -1.62
HMGB1P33-201ENST00000563485 CFAP100Q494V2 611 aa4.96□□□□□ -1.62
HMGB1P33-201ENST00000563485 TTC38Q5R3I4 469 aa4.96□□□□□ -1.62
HMGB1P33-201ENST00000563485 PRAMEF9Q5VWM5 478 aa4.96□□□□□ -1.62
HMGB1P33-201ENST00000563485 ESRP1Q6NXG1 681 aaKnown RBP4.96□□□□□ -1.62
HMGB1P33-201ENST00000563485 UBE2R2Q712K3 238 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P33-201ENST00000563485 ZFPM1Q8IX07 1006 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms