RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 COQ6Q9Y2Z9 468 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 TMEM131LA2VDJ0 1609 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 FAM135BQ49AJ0 1406 aa6□□□□□ -1.45
VPS35P1-201ENST00000563400 NKTRP30414 1462 aaKnown RBP6□□□□□ -1.45
VPS35P1-201ENST00000563400 ANKRD18BA2A2Z9 1011 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 SLITRK5O94991 958 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 ARIH2O95376 493 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 TBX18O95935 607 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 GHRHP01286 108 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 DHRS4L1P0CG22 281 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 NID1P14543 1247 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 EIF2AK2P19525 551 aaKnown RBP5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 XPAP23025 273 aaPredicted RBP5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 ELF1P32519 619 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 SOX18P35713 384 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 PIK3CAP42336 1068 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 TUBP50607 506 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 ATP11AP98196 1134 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 CCNG2Q16589 344 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 PRR16Q569H4 304 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 FAM209BQ5JX69 171 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 RNF220Q5VTB9 566 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 KCNT2Q6UVM3 1135 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 MAMDC2Q7Z304 686 aaPredicted RBP5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 TMTC1Q8IUR5 882 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 LMNTD2Q8IXW0 634 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 ESX1Q8N693 406 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 ARL10Q8N8L6 244 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 SLC30A5Q8TAD4 765 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 SH3KBP1Q96B97 665 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 TRIT1Q9H3H1 467 aaKnown RBP5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 MS4A5Q9H3V2 200 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 BRD9Q9H8M2 597 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 CYP26B1Q9NR63 512 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 HELLSQ9NRZ9 838 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 CCDC39Q9UFE4 941 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 PCDHGB2Q9Y5G2 931 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 UBR1Q8IWV7 1749 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 LAMC1P11047 1609 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 GTPBP10A4D1E9 387 aaKnown RBP5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 GOLGA8AA7E2F4 631 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 GOLGA8BA8MQT2 603 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 B4E171 279 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 C19orf81C9J6K1 198 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 FAM227AF5H4B4 570 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 AHCYL1O43865 530 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 MAFKO60675 156 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 CYP11A1P05108 521 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 RPS6KB1P23443 525 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 MAPK10P53779 464 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 SNX16P57768 344 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 GUCY1A3Q02108 690 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 MLLT1Q03111 559 aaPredicted RBP5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 ICA1Q05084 483 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 PPP2R5CQ13362 524 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 BLMHQ13867 455 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 PLCB4Q15147 1175 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 HIBCHQ6NVY1 386 aaPredicted RBP5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 TMCO3Q6UWJ1 677 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 CCDC129Q6ZRS4 1044 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 C8orf86Q6ZUL3 223 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 ENOSF1Q7L5Y1 443 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 DPP9Q86TI2 863 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 KIAA0319LQ8IZA0 1049 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 TMEM145Q8NBT3 493 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 GPBAR1Q8TDU6 330 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 ADAMTS18Q8TE60 1221 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 ASB12Q8WXK4 309 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 USP13Q92995 863 aaPredicted RBP5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 CCDC34Q96HJ3 373 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 MAP3K14Q99558 947 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 SERPINB13Q9UIV8 391 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 PPP1R9AQ9ULJ8 1098 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 TMCC3Q9ULS5 477 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 L1RE1Q9UN81 338 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 CORO2BQ9UQ03 480 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 ADGRF5Q8IZF2 1346 aa5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 CENPJQ9HC77 1338 aaPredicted RBP5.99□□□□□ -1.45
VPS35P1-201ENST00000563400 IQGAP1P46940 1657 aa5.98□□□□□ -1.45
VPS35P1-201ENST00000563400 SIGLEC1Q9BZZ2 1709 aa5.98□□□□□ -1.45
VPS35P1-201ENST00000563400 C1QTNF9BB2RNN3 333 aa5.98□□□□□ -1.45
VPS35P1-201ENST00000563400 TGM5O43548 720 aa5.98□□□□□ -1.45
VPS35P1-201ENST00000563400 UBXN7O94888 489 aa5.98□□□□□ -1.45
VPS35P1-201ENST00000563400 CKMT1AP12532 417 aa5.98□□□□□ -1.45
VPS35P1-201ENST00000563400 VEGFAP15692 232 aaPredicted RBP5.98□□□□□ -1.45
VPS35P1-201ENST00000563400 KRT9P35527 623 aa5.98□□□□□ -1.45
VPS35P1-201ENST00000563400 AFF1P51825 1210 aaKnown RBP5.98□□□□□ -1.45
VPS35P1-201ENST00000563400 CASP5P51878 434 aa5.98□□□□□ -1.45
VPS35P1-201ENST00000563400 GFRA1P56159 465 aa5.98□□□□□ -1.45
VPS35P1-201ENST00000563400 POSTNQ15063 836 aa5.98□□□□□ -1.45
VPS35P1-201ENST00000563400 SLC14A2Q15849 920 aa5.98□□□□□ -1.45
VPS35P1-201ENST00000563400 TAF12Q16514 161 aa5.98□□□□□ -1.45
VPS35P1-201ENST00000563400 TMEM201Q5SNT2 666 aa5.98□□□□□ -1.45
VPS35P1-201ENST00000563400 IZUMO3Q5VZ72 239 aa5.98□□□□□ -1.45
VPS35P1-201ENST00000563400 NPNTQ6UXI9 565 aa5.98□□□□□ -1.45
VPS35P1-201ENST00000563400 USP53Q70EK8 1073 aa5.98□□□□□ -1.45
VPS35P1-201ENST00000563400 TRIM59Q8IWR1 403 aa5.98□□□□□ -1.45
VPS35P1-201ENST00000563400 KRT78Q8N1N4 520 aa5.98□□□□□ -1.45
VPS35P1-201ENST00000563400 MIER2Q8N344 545 aa5.98□□□□□ -1.45
VPS35P1-201ENST00000563400 ADCY4Q8NFM4 1077 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms