RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 DSC3Q14574 896 aa8.91□□□□□ -0.98
HERPUD1-206ENST00000563343 SMC1AQ14683 1233 aaKnown RBP8.91□□□□□ -0.98
HERPUD1-206ENST00000563343 MCMDC2Q4G0Z9 681 aa8.91□□□□□ -0.98
HERPUD1-206ENST00000563343 ATAT1Q5SQI0 421 aa8.91□□□□□ -0.98
HERPUD1-206ENST00000563343 PCNX4Q63HM2 1172 aa8.91□□□□□ -0.98
HERPUD1-206ENST00000563343 FAM43BQ6ZT52 329 aaPredicted RBP8.91□□□□□ -0.98
HERPUD1-206ENST00000563343 SLC24A5Q71RS6 500 aa8.91□□□□□ -0.98
HERPUD1-206ENST00000563343 MAML2Q8IZL2 1156 aaPredicted RBP8.91□□□□□ -0.98
HERPUD1-206ENST00000563343 SLC39A11Q8N1S5 342 aa8.91□□□□□ -0.98
HERPUD1-206ENST00000563343 TRAPPC12Q8WVT3 735 aa8.91□□□□□ -0.98
HERPUD1-206ENST00000563343 SEPT1Q8WYJ6 367 aa8.91□□□□□ -0.98
HERPUD1-206ENST00000563343 ZSCAN10Q96SZ4 725 aaPredicted RBP8.91□□□□□ -0.98
HERPUD1-206ENST00000563343 ADAM2Q99965 735 aa8.91□□□□□ -0.98
HERPUD1-206ENST00000563343 SMARCAD1Q9H4L7 1026 aa8.91□□□□□ -0.98
HERPUD1-206ENST00000563343 RIOX1Q9H6W3 641 aa8.91□□□□□ -0.98
HERPUD1-206ENST00000563343 ELAC1Q9H777 363 aaKnown RBP8.91□□□□□ -0.98
HERPUD1-206ENST00000563343 C1orf112Q9NSG2 853 aa8.91□□□□□ -0.98
HERPUD1-206ENST00000563343 TMEM161AQ9NX61 479 aa8.91□□□□□ -0.98
HERPUD1-206ENST00000563343 ZSWIM5Q9P217 1185 aa8.91□□□□□ -0.98
HERPUD1-206ENST00000563343 WNT16Q9UBV4 365 aa8.91□□□□□ -0.98
HERPUD1-206ENST00000563343 PUF60Q9UHX1 559 aaKnown RBP8.91□□□□□ -0.98
HERPUD1-206ENST00000563343 RALYQ9UKM9 306 aaKnown RBP8.91□□□□□ -0.98
HERPUD1-206ENST00000563343 RALGAPA1Q6GYQ0 2036 aa8.9□□□□□ -0.98
HERPUD1-206ENST00000563343 FRYQ5TBA9 3013 aa8.9□□□□□ -0.98
HERPUD1-206ENST00000563343 POTEMA6NI47 508 aa8.9□□□□□ -0.98
HERPUD1-206ENST00000563343 B4E1Z4 1266 aa8.9□□□□□ -0.98
HERPUD1-206ENST00000563343 N4BP1O75113 896 aaKnown RBP8.9□□□□□ -0.98
HERPUD1-206ENST00000563343 EPCAMP16422 314 aa8.9□□□□□ -0.98
HERPUD1-206ENST00000563343 MX1P20591 662 aa8.9□□□□□ -0.98
HERPUD1-206ENST00000563343 IBSPP21815 317 aaPredicted RBP8.9□□□□□ -0.98
HERPUD1-206ENST00000563343 TGM1P22735 817 aa8.9□□□□□ -0.98
HERPUD1-206ENST00000563343 PPM1AP35813 382 aa8.9□□□□□ -0.98
HERPUD1-206ENST00000563343 NT5C2P49902 561 aa8.9□□□□□ -0.98
HERPUD1-206ENST00000563343 KRT76Q01546 638 aa8.9□□□□□ -0.98
HERPUD1-206ENST00000563343 TBC1D8BQ0IIM8 1120 aa8.9□□□□□ -0.98
HERPUD1-206ENST00000563343 SEC23AQ15436 765 aa8.9□□□□□ -0.98
HERPUD1-206ENST00000563343 CCDC178Q5BJE1 867 aa8.9□□□□□ -0.98
HERPUD1-206ENST00000563343 KIAA0319Q5VV43 1072 aa8.9□□□□□ -0.98
HERPUD1-206ENST00000563343 ZC3H14Q6PJT7 736 aaKnown RBP8.9□□□□□ -0.98
HERPUD1-206ENST00000563343 POTEGQ6S5H5 508 aa8.9□□□□□ -0.98
HERPUD1-206ENST00000563343 GPR149Q86SP6 731 aa8.9□□□□□ -0.98
HERPUD1-206ENST00000563343 IQCA1Q86XH1 822 aa8.9□□□□□ -0.98
HERPUD1-206ENST00000563343 NME8Q8N427 588 aa8.9□□□□□ -0.98
HERPUD1-206ENST00000563343 GIMAP8Q8ND71 665 aaPredicted RBP8.9□□□□□ -0.98
HERPUD1-206ENST00000563343 ZNF558Q96NG5 402 aa8.9□□□□□ -0.98
HERPUD1-206ENST00000563343 PIGSQ96S52 555 aa8.9□□□□□ -0.98
HERPUD1-206ENST00000563343 HINFPQ9BQA5 517 aa8.9□□□□□ -0.98
HERPUD1-206ENST00000563343 TMEM117Q9H0C3 514 aa8.9□□□□□ -0.98
HERPUD1-206ENST00000563343 CHMP4BQ9H444 224 aaKnown RBP8.9□□□□□ -0.98
HERPUD1-206ENST00000563343 RNF41Q9H4P4 317 aaPredicted RBP8.9□□□□□ -0.98
HERPUD1-206ENST00000563343 DZANK1Q9NVP4 752 aa8.9□□□□□ -0.98
HERPUD1-206ENST00000563343 IRAK3Q9Y616 596 aa8.9□□□□□ -0.98
HERPUD1-206ENST00000563343 DENND3A2RUS2 1198 aa8.89□□□□□ -0.99
HERPUD1-206ENST00000563343 M0QZ92 97 aa8.89□□□□□ -0.99
HERPUD1-206ENST00000563343 DCNP07585 359 aaKnown RBP8.89□□□□□ -0.99
HERPUD1-206ENST00000563343 CFHP08603 1231 aa8.89□□□□□ -0.99
HERPUD1-206ENST00000563343 GLULP15104 373 aa8.89□□□□□ -0.99
HERPUD1-206ENST00000563343 ITGB5P18084 799 aa8.89□□□□□ -0.99
HERPUD1-206ENST00000563343 PLCB4Q15147 1175 aa8.89□□□□□ -0.99
HERPUD1-206ENST00000563343 C20orf194Q5TEA3 1177 aa8.89□□□□□ -0.99
HERPUD1-206ENST00000563343 PHLDB3Q6NSJ2 640 aa8.89□□□□□ -0.99
HERPUD1-206ENST00000563343 XRRA1Q6P2D8 792 aa8.89□□□□□ -0.99
HERPUD1-206ENST00000563343 MTHFD1LQ6UB35 978 aa8.89□□□□□ -0.99
HERPUD1-206ENST00000563343 OTOP3Q7RTS5 596 aa8.89□□□□□ -0.99
HERPUD1-206ENST00000563343 FAM228AQ86W67 206 aa8.89□□□□□ -0.99
HERPUD1-206ENST00000563343 HOMER1Q86YM7 354 aa8.89□□□□□ -0.99
HERPUD1-206ENST00000563343 C1orf210Q8IVY1 113 aa8.89□□□□□ -0.99
HERPUD1-206ENST00000563343 LRRC43Q8N309 656 aa8.89□□□□□ -0.99
HERPUD1-206ENST00000563343 GLG1Q92896 1179 aa8.89□□□□□ -0.99
HERPUD1-206ENST00000563343 ACSF2Q96CM8 615 aaPredicted RBP8.89□□□□□ -0.99
HERPUD1-206ENST00000563343 EVI5LQ96CN4 794 aa8.89□□□□□ -0.99
HERPUD1-206ENST00000563343 GPRASP2Q96D09 838 aa8.89□□□□□ -0.99
HERPUD1-206ENST00000563343 ZBP1Q9H171 429 aa8.89□□□□□ -0.99
HERPUD1-206ENST00000563343 TBC1D17Q9HA65 648 aa8.89□□□□□ -0.99
HERPUD1-206ENST00000563343 ATP6V0A4Q9HBG4 840 aa8.89□□□□□ -0.99
HERPUD1-206ENST00000563343 SPG21Q9NZD8 308 aa8.89□□□□□ -0.99
HERPUD1-206ENST00000563343 IGSF9Q9P2J2 1179 aa8.89□□□□□ -0.99
HERPUD1-206ENST00000563343 FBXL21Q9UKT6 434 aa8.89□□□□□ -0.99
HERPUD1-206ENST00000563343 ST3GAL5Q9UNP4 418 aa8.89□□□□□ -0.99
HERPUD1-206ENST00000563343 ZZEF1O43149 2961 aa8.88□□□□□ -0.99
HERPUD1-206ENST00000563343 MEIS2O14770 477 aa8.88□□□□□ -0.99
HERPUD1-206ENST00000563343 RPS6KA5O75582 802 aa8.88□□□□□ -0.99
HERPUD1-206ENST00000563343 CXCL14O95715 111 aa8.88□□□□□ -0.99
HERPUD1-206ENST00000563343 SDHBP21912 280 aa8.88□□□□□ -0.99
HERPUD1-206ENST00000563343 KRT17Q04695 432 aa8.88□□□□□ -0.99
HERPUD1-206ENST00000563343 NMIQ13287 307 aaPredicted RBP8.88□□□□□ -0.99
HERPUD1-206ENST00000563343 COL9A2Q14055 689 aaPredicted RBP8.88□□□□□ -0.99
HERPUD1-206ENST00000563343 CLLU1OSQ5K130 101 aa8.88□□□□□ -0.99
HERPUD1-206ENST00000563343 VARS2Q5ST30 1063 aaKnown RBP8.88□□□□□ -0.99
HERPUD1-206ENST00000563343 USP17L6PQ6QN14 398 aa8.88□□□□□ -0.99
HERPUD1-206ENST00000563343 TMC5Q6UXY8 1006 aa8.88□□□□□ -0.99
HERPUD1-206ENST00000563343 CCDC149Q6ZUS6 474 aa8.88□□□□□ -0.99
HERPUD1-206ENST00000563343 NLRX1Q86UT6 975 aa8.88□□□□□ -0.99
HERPUD1-206ENST00000563343 TMEM173Q86WV6 379 aaPredicted RBP8.88□□□□□ -0.99
HERPUD1-206ENST00000563343 KIAA0319LQ8IZA0 1049 aa8.88□□□□□ -0.99
HERPUD1-206ENST00000563343 RSAD2Q8WXG1 361 aa8.88□□□□□ -0.99
HERPUD1-206ENST00000563343 AUTS2Q8WXX7 1259 aa8.88□□□□□ -0.99
HERPUD1-206ENST00000563343 BMP2KQ9NSY1 1161 aaPredicted RBP8.88□□□□□ -0.99
HERPUD1-206ENST00000563343 CA14Q9ULX7 337 aa8.88□□□□□ -0.99
HERPUD1-206ENST00000563343 UBIAD1Q9Y5Z9 338 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms