RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 DEF6Q9H4E7 631 aa20.97■□□□□ 0.95
SMPD3-203ENST00000563226 METTL14Q9HCE5 456 aaKnown RBP20.97■□□□□ 0.95
SMPD3-203ENST00000563226 GPRC5CQ9NQ84 441 aa20.97■□□□□ 0.95
SMPD3-203ENST00000563226 HOXC10Q9NYD6 342 aa20.97■□□□□ 0.95
SMPD3-203ENST00000563226 AKR1B10O60218 316 aa20.97■□□□□ 0.95
SMPD3-203ENST00000563226 KCNA2P16389 499 aa20.97■□□□□ 0.95
SMPD3-203ENST00000563226 CYP2J2P51589 502 aa20.97■□□□□ 0.95
SMPD3-203ENST00000563226 NPEPPSP55786 919 aa20.97■□□□□ 0.95
SMPD3-203ENST00000563226 PSMC5P62195 406 aa20.97■□□□□ 0.95
SMPD3-203ENST00000563226 SPA17Q15506 151 aa20.97■□□□□ 0.95
SMPD3-203ENST00000563226 SFMBT2Q5VUG0 894 aa20.97■□□□□ 0.95
SMPD3-203ENST00000563226 FAM186BQ8IYM0 893 aa20.97■□□□□ 0.95
SMPD3-203ENST00000563226 GBP3Q9H0R5 595 aa20.97■□□□□ 0.95
SMPD3-203ENST00000563226 TCEAL9Q9UHQ7 104 aa20.97■□□□□ 0.95
SMPD3-203ENST00000563226 PCDHA13Q9Y5I0 950 aa20.97■□□□□ 0.95
SMPD3-203ENST00000563226 A0A0G2JMZ2 1700 aa20.96■□□□□ 0.95
SMPD3-203ENST00000563226 ENC1O14682 589 aa20.96■□□□□ 0.95
SMPD3-203ENST00000563226 KRT86O43790 486 aa20.96■□□□□ 0.95
SMPD3-203ENST00000563226 PON1P27169 355 aa20.96■□□□□ 0.95
SMPD3-203ENST00000563226 SFNP31947 248 aa20.96■□□□□ 0.95
SMPD3-203ENST00000563226 AMPD2Q01433 879 aa20.96■□□□□ 0.95
SMPD3-203ENST00000563226 GFPT1Q06210 699 aaPredicted RBP20.96■□□□□ 0.95
SMPD3-203ENST00000563226 RAPGEF1Q13905 1077 aa20.96■□□□□ 0.95
SMPD3-203ENST00000563226 STXBP4Q6ZWJ1 553 aa20.96■□□□□ 0.95
SMPD3-203ENST00000563226 NLRX1Q86UT6 975 aa20.96■□□□□ 0.95
SMPD3-203ENST00000563226 IFIH1Q9BYX4 1025 aaKnown RBP20.96■□□□□ 0.95
SMPD3-203ENST00000563226 DMAC2Q9NW81 257 aa20.96■□□□□ 0.95
SMPD3-203ENST00000563226 MYPNQ86TC9 1320 aa20.95■□□□□ 0.95
SMPD3-203ENST00000563226 ARID2Q68CP9 1835 aa20.95■□□□□ 0.94
SMPD3-203ENST00000563226 TISP43B9A030 160 aa20.95■□□□□ 0.94
SMPD3-203ENST00000563226 SORBS3O60504 671 aa20.95■□□□□ 0.94
SMPD3-203ENST00000563226 YBX3P16989 372 aaKnown RBP eCLIP20.95■□□□□ 0.94
SMPD3-203ENST00000563226 PSMC2P35998 433 aaKnown RBP20.95■□□□□ 0.94
SMPD3-203ENST00000563226 MAPK8IP2Q13387 824 aaPredicted RBP20.95■□□□□ 0.94
SMPD3-203ENST00000563226 EXOC3L4Q17RC7 722 aa20.95■□□□□ 0.94
SMPD3-203ENST00000563226 TDRD12Q587J7 1177 aaKnown RBP20.95■□□□□ 0.94
SMPD3-203ENST00000563226 RSRC2Q7L4I2 434 aaKnown RBP20.95■□□□□ 0.94
SMPD3-203ENST00000563226 HS2ST1Q7LGA3 356 aa20.95■□□□□ 0.94
SMPD3-203ENST00000563226 SYN2Q92777 582 aaPredicted RBP20.95■□□□□ 0.94
SMPD3-203ENST00000563226 DCPSQ96C86 337 aaKnown RBP20.95■□□□□ 0.94
SMPD3-203ENST00000563226 MOV10L1Q9BXT6 1211 aaKnown RBP20.95■□□□□ 0.94
SMPD3-203ENST00000563226 AJAP1Q9UKB5 411 aaPredicted RBP20.95■□□□□ 0.94
SMPD3-203ENST00000563226 MACROD2A1Z1Q3 448 aa20.95■□□□□ 0.94
SMPD3-203ENST00000563226 TEX35Q5T0J7 233 aa20.95■□□□□ 0.94
SMPD3-203ENST00000563226 SULF1Q8IWU6 871 aa20.95■□□□□ 0.94
SMPD3-203ENST00000563226 FAM133AQ8N9E0 248 aa20.95■□□□□ 0.94
SMPD3-203ENST00000563226 RBM46Q8TBY0 533 aaKnown RBP20.95■□□□□ 0.94
SMPD3-203ENST00000563226 CCDC43Q96MW1 224 aaKnown RBP20.95■□□□□ 0.94
SMPD3-203ENST00000563226 SIX2Q9NPC8 291 aa20.95■□□□□ 0.94
SMPD3-203ENST00000563226 LARSQ9P2J5 1176 aaKnown RBP20.95■□□□□ 0.94
SMPD3-203ENST00000563226 HDAC6Q9UBN7 1215 aa20.95■□□□□ 0.94
SMPD3-203ENST00000563226 PUF60Q9UHX1 559 aaKnown RBP20.95■□□□□ 0.94
SMPD3-203ENST00000563226 FHOD1Q9Y613 1164 aa20.95■□□□□ 0.94
SMPD3-203ENST00000563226 SSU72P8A0A1W2PR75 194 aa20.94■□□□□ 0.94
SMPD3-203ENST00000563226 ATP1A1P05023 1023 aaKnown RBP20.94■□□□□ 0.94
SMPD3-203ENST00000563226 PLS3P13797 630 aa20.94■□□□□ 0.94
SMPD3-203ENST00000563226 ARID5AQ03989 594 aa20.94■□□□□ 0.94
SMPD3-203ENST00000563226 FSTL1Q12841 308 aa20.94■□□□□ 0.94
SMPD3-203ENST00000563226 XKR9Q5GH70 373 aa20.94■□□□□ 0.94
SMPD3-203ENST00000563226 KLHDC7AQ5VTJ3 777 aa20.94■□□□□ 0.94
SMPD3-203ENST00000563226 ZNF746Q6NUN9 644 aaPredicted RBP20.94■□□□□ 0.94
SMPD3-203ENST00000563226 ANO5Q75V66 913 aa20.94■□□□□ 0.94
SMPD3-203ENST00000563226 NUCKS1Q9H1E3 243 aaKnown RBP20.94■□□□□ 0.94
SMPD3-203ENST00000563226 PLCB1Q9NQ66 1216 aa20.94■□□□□ 0.94
SMPD3-203ENST00000563226 ZNF862O60290 1169 aa20.93■□□□□ 0.94
SMPD3-203ENST00000563226 SERPING1P05155 500 aa20.93■□□□□ 0.94
SMPD3-203ENST00000563226 UCHL3P15374 230 aa20.93■□□□□ 0.94
SMPD3-203ENST00000563226 H2AFXP16104 143 aaPredicted RBP20.93■□□□□ 0.94
SMPD3-203ENST00000563226 SP4Q02446 784 aa20.93■□□□□ 0.94
SMPD3-203ENST00000563226 KIF5AQ12840 1032 aa20.93■□□□□ 0.94
SMPD3-203ENST00000563226 SLC9C1Q4G0N8 1177 aa20.93■□□□□ 0.94
SMPD3-203ENST00000563226 MOB2Q70IA6 237 aa20.93■□□□□ 0.94
SMPD3-203ENST00000563226 SYCP3Q8IZU3 236 aa20.93■□□□□ 0.94
SMPD3-203ENST00000563226 SENP7Q9BQF6 1050 aa20.93■□□□□ 0.94
SMPD3-203ENST00000563226 ELP3Q9H9T3 547 aa20.93■□□□□ 0.94
SMPD3-203ENST00000563226 MLXIPQ9HAP2 919 aa20.93■□□□□ 0.94
SMPD3-203ENST00000563226 BTBD7Q9P203 1132 aa20.93■□□□□ 0.94
SMPD3-203ENST00000563226 PCDHA10Q9Y5I2 948 aa20.93■□□□□ 0.94
SMPD3-203ENST00000563226 CSADQ9Y600 493 aa20.93■□□□□ 0.94
SMPD3-203ENST00000563226 CNTN2Q02246 1040 aa20.93■□□□□ 0.94
SMPD3-203ENST00000563226 ENOX2Q16206 610 aaKnown RBP20.93■□□□□ 0.94
SMPD3-203ENST00000563226 SRGAP1Q7Z6B7 1085 aa20.93■□□□□ 0.94
SMPD3-203ENST00000563226 CLMNQ96JQ2 1002 aa20.93■□□□□ 0.94
SMPD3-203ENST00000563226 MKNK1Q9BUB5 465 aa20.93■□□□□ 0.94
SMPD3-203ENST00000563226 GCNT4Q9P109 453 aa20.93■□□□□ 0.94
SMPD3-203ENST00000563226 GABBR1Q9UBS5 961 aa20.93■□□□□ 0.94
SMPD3-203ENST00000563226 C9orf131Q5VYM1 1079 aa20.92■□□□□ 0.94
SMPD3-203ENST00000563226 GJB7Q6PEY0 223 aa20.92■□□□□ 0.94
SMPD3-203ENST00000563226 LBX2Q6XYB7 198 aa20.92■□□□□ 0.94
SMPD3-203ENST00000563226 GBP6Q6ZN66 633 aa20.92■□□□□ 0.94
SMPD3-203ENST00000563226 ANKEF1Q9NU02 776 aa20.92■□□□□ 0.94
SMPD3-203ENST00000563226 AIPL1Q9NZN9 384 aa20.92■□□□□ 0.94
SMPD3-203ENST00000563226 MYO6Q9UM54 1294 aa20.92■□□□□ 0.94
SMPD3-203ENST00000563226 MYH10P35580 1976 aa20.92■□□□□ 0.94
SMPD3-203ENST00000563226 IRF6O14896 467 aa20.92■□□□□ 0.94
SMPD3-203ENST00000563226 MAFGO15525 162 aa20.92■□□□□ 0.94
SMPD3-203ENST00000563226 PPP1R12BO60237 982 aaPredicted RBP20.92■□□□□ 0.94
SMPD3-203ENST00000563226 STBD1O95210 358 aa20.92■□□□□ 0.94
SMPD3-203ENST00000563226 TRIM49P0CI25 452 aa20.92■□□□□ 0.94
SMPD3-203ENST00000563226 TRIM49CP0CI26 452 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms