RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 RFC2P35250 354 aa18.23■□□□□ 0.51
USB1-206ENST00000562534 GRB10Q13322 594 aa18.23■□□□□ 0.51
USB1-206ENST00000562534 FAM26DQ5JW98 314 aa18.23■□□□□ 0.51
USB1-206ENST00000562534 ZNF618Q5T7W0 954 aa18.23■□□□□ 0.51
USB1-206ENST00000562534 ADALQ6DHV7 355 aa18.23■□□□□ 0.51
USB1-206ENST00000562534 RPUSD2Q8IZ73 545 aaKnown RBP18.23■□□□□ 0.51
USB1-206ENST00000562534 TCP11Q8WWU5 503 aa18.23■□□□□ 0.51
USB1-206ENST00000562534 SYMPKQ92797 1274 aaKnown RBP18.23■□□□□ 0.51
USB1-206ENST00000562534 BADQ92934 168 aa18.23■□□□□ 0.51
USB1-206ENST00000562534 WNT8BQ93098 351 aa18.23■□□□□ 0.51
USB1-206ENST00000562534 ZBTB10Q96DT7 871 aa18.23■□□□□ 0.51
USB1-206ENST00000562534 PNMA5Q96PV4 448 aa18.23■□□□□ 0.51
USB1-206ENST00000562534 MAP7D2Q96T17 732 aa18.23■□□□□ 0.51
USB1-206ENST00000562534 FAM49AQ9H0Q0 323 aaPredicted RBP18.23■□□□□ 0.51
USB1-206ENST00000562534 ALPK3Q96L96 1907 aa18.22■□□□□ 0.51
USB1-206ENST00000562534 ARHGEF35A5YM69 484 aa18.22■□□□□ 0.51
USB1-206ENST00000562534 E9PMD0 336 aa18.22■□□□□ 0.51
USB1-206ENST00000562534 ASAP2O43150 1006 aa18.22■□□□□ 0.51
USB1-206ENST00000562534 CCL23P55773 120 aa18.22■□□□□ 0.51
USB1-206ENST00000562534 AXDND1Q5T1B0 1012 aaPredicted RBP18.22■□□□□ 0.51
USB1-206ENST00000562534 LRRC8DQ7L1W4 858 aa18.22■□□□□ 0.51
USB1-206ENST00000562534 LINC01465Q8N7H1 131 aa18.22■□□□□ 0.51
USB1-206ENST00000562534 BHMT2Q9H2M3 363 aa18.22■□□□□ 0.51
USB1-206ENST00000562534 TRIP12Q14669 1992 aaPredicted RBP18.22■□□□□ 0.51
USB1-206ENST00000562534 DNAH12Q6ZR08 3092 aa18.21■□□□□ 0.51
USB1-206ENST00000562534 FPGSQ05932 587 aa18.21■□□□□ 0.51
USB1-206ENST00000562534 KARSQ15046 597 aaKnown RBP18.21■□□□□ 0.51
USB1-206ENST00000562534 TMEM119Q4V9L6 283 aa18.21■□□□□ 0.51
USB1-206ENST00000562534 RRAGBQ5VZM2 374 aa18.21■□□□□ 0.51
USB1-206ENST00000562534 PADI6Q6TGC4 694 aa18.21■□□□□ 0.51
USB1-206ENST00000562534 CCDC73Q6ZRK6 1079 aa18.21■□□□□ 0.51
USB1-206ENST00000562534 USP49Q70CQ1 688 aa18.21■□□□□ 0.51
USB1-206ENST00000562534 LRRC71Q8N4P6 559 aa18.21■□□□□ 0.51
USB1-206ENST00000562534 SYT2Q8N9I0 419 aaPredicted RBP18.21■□□□□ 0.51
USB1-206ENST00000562534 PLIN2Q99541 437 aa18.21■□□□□ 0.51
USB1-206ENST00000562534 MTRQ99707 1265 aa18.21■□□□□ 0.51
USB1-206ENST00000562534 CELF4Q9BZC1 486 aaKnown RBP18.21■□□□□ 0.51
USB1-206ENST00000562534 ATP6V0A4Q9HBG4 840 aa18.21■□□□□ 0.51
USB1-206ENST00000562534 FAM13BQ9NYF5 915 aa18.21■□□□□ 0.51
USB1-206ENST00000562534 AKT3Q9Y243 479 aa18.21■□□□□ 0.51
USB1-206ENST00000562534 UMODL1Q5DID0 1318 aa18.21■□□□□ 0.51
USB1-206ENST00000562534 MKI67P46013 3256 aaKnown RBP18.2■□□□□ 0.5
USB1-206ENST00000562534 CHRNA1P02708 482 aa18.2■□□□□ 0.5
USB1-206ENST00000562534 CYP11B2P19099 503 aa18.2■□□□□ 0.5
USB1-206ENST00000562534 CLCN3P51790 818 aa18.2■□□□□ 0.5
USB1-206ENST00000562534 MRPS6P82932 125 aaKnown RBP18.2■□□□□ 0.5
USB1-206ENST00000562534 PPIGQ13427 754 aaKnown RBP eCLIP18.2■□□□□ 0.51e-8■□□□□ 8.5
USB1-206ENST00000562534 EMC2Q15006 297 aa18.2■□□□□ 0.5
USB1-206ENST00000562534 CSPP1Q1MSJ5 1256 aa18.2■□□□□ 0.5
USB1-206ENST00000562534 SHC4Q6S5L8 630 aa18.2■□□□□ 0.5
USB1-206ENST00000562534 MCPH1Q8NEM0 835 aa18.2■□□□□ 0.5
USB1-206ENST00000562534 CHAMP1Q96JM3 812 aa18.2■□□□□ 0.5
USB1-206ENST00000562534 WNT8AQ9H1J5 351 aa18.2■□□□□ 0.5
USB1-206ENST00000562534 KCND2Q9NZV8 630 aa18.2■□□□□ 0.5
USB1-206ENST00000562534 SUCLA2Q9P2R7 463 aaPredicted RBP18.2■□□□□ 0.5
USB1-206ENST00000562534 SQORQ9Y6N5 450 aa18.2■□□□□ 0.5
USB1-206ENST00000562534 MYH15Q9Y2K3 1946 aa18.19■□□□□ 0.5
USB1-206ENST00000562534 PFKMP08237 780 aa18.19■□□□□ 0.5
USB1-206ENST00000562534 PLA2G4BP0C869 781 aa18.19■□□□□ 0.5
USB1-206ENST00000562534 CSF2RAP15509 400 aa18.19■□□□□ 0.5
USB1-206ENST00000562534 PLCG1P19174 1290 aa18.19■□□□□ 0.5
USB1-206ENST00000562534 CMA1P23946 247 aa18.19■□□□□ 0.5
USB1-206ENST00000562534 MDM2Q00987 491 aaPredicted RBP18.19■□□□□ 0.5
USB1-206ENST00000562534 MKRN4PQ13434 485 aaPredicted RBP18.19■□□□□ 0.5
USB1-206ENST00000562534 MXD4Q14582 209 aaPredicted RBP18.19■□□□□ 0.5
USB1-206ENST00000562534 TRAF7Q6Q0C0 670 aa18.19■□□□□ 0.5
USB1-206ENST00000562534 FAM43BQ6ZT52 329 aaPredicted RBP18.19■□□□□ 0.5
USB1-206ENST00000562534 KCNK18Q7Z418 384 aa18.19■□□□□ 0.5
USB1-206ENST00000562534 USP38Q8NB14 1042 aa18.19■□□□□ 0.5
USB1-206ENST00000562534 PSPC1Q8WXF1 523 aaKnown RBP18.19■□□□□ 0.5
USB1-206ENST00000562534 SCLYQ96I15 445 aa18.19■□□□□ 0.5
USB1-206ENST00000562534 PYM1Q9BRP8 204 aaKnown RBP18.19■□□□□ 0.5
USB1-206ENST00000562534 PANK2Q9BZ23 570 aa18.19■□□□□ 0.5
USB1-206ENST00000562534 STK17AQ9UEE5 414 aa18.19■□□□□ 0.5
USB1-206ENST00000562534 TRPV2Q9Y5S1 764 aa18.19■□□□□ 0.5
USB1-206ENST00000562534 CDY2AQ9Y6F7 541 aa18.19■□□□□ 0.5
USB1-206ENST00000562534 GOLGA6L4A6NEF3 574 aa18.18■□□□□ 0.5
USB1-206ENST00000562534 VTNP04004 478 aa18.18■□□□□ 0.5
USB1-206ENST00000562534 CTSHP09668 335 aa18.18■□□□□ 0.5
USB1-206ENST00000562534 MAGEA10P43363 369 aaPredicted RBP18.18■□□□□ 0.5
USB1-206ENST00000562534 CRYBB1P53674 252 aaPredicted RBP18.18■□□□□ 0.5
USB1-206ENST00000562534 NLRP11P59045 1033 aaKnown RBP18.18■□□□□ 0.5
USB1-206ENST00000562534 MGAT3Q09327 533 aa18.18■□□□□ 0.5
USB1-206ENST00000562534 RESP18Q5W5W9 173 aa18.18■□□□□ 0.5
USB1-206ENST00000562534 RINT1Q6NUQ1 792 aa18.18■□□□□ 0.5
USB1-206ENST00000562534 PRPF31Q8WWY3 499 aaKnown RBP18.18■□□□□ 0.5
USB1-206ENST00000562534 TMEM143Q96AN5 459 aa18.18■□□□□ 0.5
USB1-206ENST00000562534 GDF15Q99988 308 aa18.18■□□□□ 0.5
USB1-206ENST00000562534 TIPINQ9BVW5 301 aa18.18■□□□□ 0.5
USB1-206ENST00000562534 IL23AQ9NPF7 189 aa18.18■□□□□ 0.5
USB1-206ENST00000562534 A0A1W2PQ27 194 aa18.17■□□□□ 0.5
USB1-206ENST00000562534 A0A1W2PQ64 194 aa18.17■□□□□ 0.5
USB1-206ENST00000562534 A0A1W2PQD8 194 aa18.17■□□□□ 0.5
USB1-206ENST00000562534 USO1O60763 962 aaKnown RBP18.17■□□□□ 0.5
USB1-206ENST00000562534 GPR32O75388 356 aa18.17■□□□□ 0.5
USB1-206ENST00000562534 SSBP05455 408 aaKnown RBP eCLIP18.17■□□□□ 0.5
USB1-206ENST00000562534 BMP8BP34820 402 aa18.17■□□□□ 0.5
USB1-206ENST00000562534 ARL2P36404 184 aa18.17■□□□□ 0.5
USB1-206ENST00000562534 SLC12A3P55017 1021 aa18.17■□□□□ 0.5
USB1-206ENST00000562534 POU5F1BQ06416 359 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms