RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 CHP1Q99653 195 aa12.8□□□□□ -0.36
PCAT1-202ENST00000561978 PCDHA2Q9Y5H9 948 aa12.8□□□□□ -0.36
PCAT1-202ENST00000561978 COL4A3BPQ9Y5P4 624 aa12.8□□□□□ -0.36
PCAT1-202ENST00000561978 DNAH12Q6ZR08 3092 aa12.79□□□□□ -0.36
PCAT1-202ENST00000561978 FANCGO15287 622 aa12.79□□□□□ -0.36
PCAT1-202ENST00000561978 LRRC41Q15345 812 aa12.79□□□□□ -0.36
PCAT1-202ENST00000561978 ERCC6LQ2NKX8 1250 aa12.79□□□□□ -0.36
PCAT1-202ENST00000561978 ZCWPW2Q504Y3 356 aa12.79□□□□□ -0.36
PCAT1-202ENST00000561978 LRRC55Q6ZSA7 311 aa12.79□□□□□ -0.36
PCAT1-202ENST00000561978 RIOX2Q8IUF8 465 aa12.79□□□□□ -0.36
PCAT1-202ENST00000561978 ACRBPQ8NEB7 543 aa12.79□□□□□ -0.36
PCAT1-202ENST00000561978 EEF2KMTQ96G04 330 aa12.79□□□□□ -0.36
PCAT1-202ENST00000561978 CARD6Q9BX69 1037 aa12.79□□□□□ -0.36
PCAT1-202ENST00000561978 TUFT1Q9NNX1 390 aa12.79□□□□□ -0.36
PCAT1-202ENST00000561978 ARGLU1Q9NWB6 273 aaPredicted RBP12.79□□□□□ -0.36
PCAT1-202ENST00000561978 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.79□□□□□ -0.36
PCAT1-202ENST00000561978 V9GYY5 206 aaPredicted RBP12.79□□□□□ -0.36
PCAT1-202ENST00000561978 PLXNB2O15031 1838 aa12.79□□□□□ -0.36
PCAT1-202ENST00000561978 ATP2A1O14983 1001 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 TADA3O75528 432 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 SPATA31C1P0DKV0 1188 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 ALAS1P13196 640 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 HNRNPH3P31942 346 aaKnown RBP12.78□□□□□ -0.36
PCAT1-202ENST00000561978 FLT3LGP49771 235 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 MARSP56192 900 aaKnown RBP12.78□□□□□ -0.36
PCAT1-202ENST00000561978 PPP2R3AQ06190 1150 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 EDRF1Q3B7T1 1238 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 ARSHQ5FYA8 562 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 WDR59Q6PJI9 974 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 POTEGQ6S5H5 508 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 PLEKHH3Q7Z736 793 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 CEP112Q8N8E3 955 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 EHBP1Q8NDI1 1231 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 NUCKS1Q9H1E3 243 aaKnown RBP12.78□□□□□ -0.36
PCAT1-202ENST00000561978 AGPAT5Q9NUQ2 364 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 SRRDQ9UH36 339 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 VAV3Q9UKW4 847 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 FAM184BQ9ULE4 1060 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 CCPG1Q9ULG6 757 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 IVNS1ABPQ9Y6Y0 642 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 IGLV3-22A0A075B6J6 115 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 EIF3CLB5ME19 914 aaKnown RBP12.78□□□□□ -0.36
PCAT1-202ENST00000561978 KRT86O43790 486 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 EYA4O95677 639 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 ICAM1P05362 532 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 FDX1P10109 184 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 ARHGEF6Q15052 776 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 CCDC40Q4G0X9 1142 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 GPATCH11Q8N954 259 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 EIF3CQ99613 913 aaKnown RBP12.78□□□□□ -0.36
PCAT1-202ENST00000561978 EIF2AK1Q9BQI3 630 aaKnown RBP12.78□□□□□ -0.36
PCAT1-202ENST00000561978 MCOLN1Q9GZU1 580 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 NHEJ1Q9H9Q4 299 aaPredicted RBP12.78□□□□□ -0.36
PCAT1-202ENST00000561978 CDC23Q9UJX2 597 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 GJD2Q9UKL4 321 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 PNMA2Q9UL42 364 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 PLAGL2Q9UPG8 496 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 SIK3Q9Y2K2 1263 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 PTCH2Q9Y6C5 1203 aa12.78□□□□□ -0.36
PCAT1-202ENST00000561978 CETN3O15182 167 aa12.77□□□□□ -0.37
PCAT1-202ENST00000561978 SLC25A27O95847 323 aa12.77□□□□□ -0.37
PCAT1-202ENST00000561978 CYP2B6P20813 491 aa12.77□□□□□ -0.37
PCAT1-202ENST00000561978 ARHGAP25P42331 645 aa12.77□□□□□ -0.37
PCAT1-202ENST00000561978 OAZ1P54368 228 aa12.77□□□□□ -0.37
PCAT1-202ENST00000561978 PPP2R5CQ13362 524 aa12.77□□□□□ -0.37
PCAT1-202ENST00000561978 GIT2Q14161 759 aa12.77□□□□□ -0.37
PCAT1-202ENST00000561978 CEP55Q53EZ4 464 aa12.77□□□□□ -0.37
PCAT1-202ENST00000561978 GPR161Q8N6U8 529 aaKnown RBP12.77□□□□□ -0.37
PCAT1-202ENST00000561978 NEK11Q8NG66 645 aa12.77□□□□□ -0.37
PCAT1-202ENST00000561978 RAET1EQ8TD07 263 aa12.77□□□□□ -0.37
PCAT1-202ENST00000561978 CCDC42Q96M95 316 aa12.77□□□□□ -0.37
PCAT1-202ENST00000561978 TRERF1Q96PN7 1200 aa12.77□□□□□ -0.37
PCAT1-202ENST00000561978 NAPGQ99747 312 aaPredicted RBP12.77□□□□□ -0.37
PCAT1-202ENST00000561978 WDR11Q9BZH6 1224 aa12.77□□□□□ -0.37
PCAT1-202ENST00000561978 IRX2Q9BZI1 471 aaPredicted RBP12.77□□□□□ -0.37
PCAT1-202ENST00000561978 MROH8Q9H579 483 aa12.77□□□□□ -0.37
PCAT1-202ENST00000561978 MMRN2Q9H8L6 949 aa12.77□□□□□ -0.37
PCAT1-202ENST00000561978 PTPN22Q9Y2R2 807 aa12.77□□□□□ -0.37
PCAT1-202ENST00000561978 GNRH1P01148 92 aa12.76□□□□□ -0.37
PCAT1-202ENST00000561978 PGK2P07205 417 aa12.76□□□□□ -0.37
PCAT1-202ENST00000561978 GAP43P17677 238 aa12.76□□□□□ -0.37
PCAT1-202ENST00000561978 HOXD10P28358 340 aa12.76□□□□□ -0.37
PCAT1-202ENST00000561978 ADORA2AP29274 412 aa12.76□□□□□ -0.37
PCAT1-202ENST00000561978 SPA17Q15506 151 aa12.76□□□□□ -0.37
PCAT1-202ENST00000561978 MUM1L1Q5H9M0 696 aa12.76□□□□□ -0.37
PCAT1-202ENST00000561978 LRCH2Q5VUJ6 765 aa12.76□□□□□ -0.37
PCAT1-202ENST00000561978 KIAA1328Q86T90 577 aa12.76□□□□□ -0.37
PCAT1-202ENST00000561978 MCF2L2Q86YR7 1114 aa12.76□□□□□ -0.37
PCAT1-202ENST00000561978 ZC3H3Q8IXZ2 948 aaKnown RBP12.76□□□□□ -0.37
PCAT1-202ENST00000561978 TXLNBQ8N3L3 684 aa12.76□□□□□ -0.37
PCAT1-202ENST00000561978 SAMD3Q8N6K7 520 aa12.76□□□□□ -0.37
PCAT1-202ENST00000561978 SHCBP1Q8NEM2 672 aa12.76□□□□□ -0.37
PCAT1-202ENST00000561978 SCFD1Q8WVM8 642 aa12.76□□□□□ -0.37
PCAT1-202ENST00000561978 SLC5A5Q92911 643 aa12.76□□□□□ -0.37
PCAT1-202ENST00000561978 UIMC1Q96RL1 719 aa12.76□□□□□ -0.37
PCAT1-202ENST00000561978 TSGA10Q9BZW7 698 aa12.76□□□□□ -0.37
PCAT1-202ENST00000561978 KCTD10Q9H3F6 313 aa12.76□□□□□ -0.37
PCAT1-202ENST00000561978 ZHX3Q9H4I2 956 aa12.76□□□□□ -0.37
PCAT1-202ENST00000561978 RNF146Q9NTX7 359 aa12.76□□□□□ -0.37
PCAT1-202ENST00000561978 MAP3K20Q9NYL2 800 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms