RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 RPS6KA5O75582 802 aa11.32□□□□□ -0.6
HERC1-212ENST00000561348 BAIAP3O94812 1187 aa11.32□□□□□ -0.6
HERC1-212ENST00000561348 SLITRK3O94933 977 aa11.32□□□□□ -0.6
HERC1-212ENST00000561348 CXCL10P02778 98 aa11.32□□□□□ -0.6
HERC1-212ENST00000561348 RPLP2P05387 115 aaKnown RBP11.32□□□□□ -0.6
HERC1-212ENST00000561348 PDCP20941 246 aa11.32□□□□□ -0.6
HERC1-212ENST00000561348 TRAPPC10P48553 1259 aa11.32□□□□□ -0.6
HERC1-212ENST00000561348 TOB1P50616 345 aaPredicted RBP11.32□□□□□ -0.6
HERC1-212ENST00000561348 CEBPZQ03701 1054 aaKnown RBP11.32□□□□□ -0.6
HERC1-212ENST00000561348 CUL4AQ13619 759 aa11.32□□□□□ -0.6
HERC1-212ENST00000561348 PLEKHG4Q58EX7 1191 aa11.32□□□□□ -0.6
HERC1-212ENST00000561348 FAM26DQ5JW98 314 aa11.32□□□□□ -0.6
HERC1-212ENST00000561348 FBXO47Q5MNV8 452 aa11.32□□□□□ -0.6
HERC1-212ENST00000561348 PPP2R2DQ66LE6 453 aa11.32□□□□□ -0.6
HERC1-212ENST00000561348 B3GNT9Q6UX72 402 aa11.32□□□□□ -0.6
HERC1-212ENST00000561348 ANO5Q75V66 913 aa11.32□□□□□ -0.6
HERC1-212ENST00000561348 RHPN2Q8IUC4 686 aa11.32□□□□□ -0.6
HERC1-212ENST00000561348 HERC6Q8IVU3 1022 aa11.32□□□□□ -0.6
HERC1-212ENST00000561348 NME8Q8N427 588 aa11.32□□□□□ -0.6
HERC1-212ENST00000561348 SLC7A3Q8WY07 619 aa11.32□□□□□ -0.6
HERC1-212ENST00000561348 NLRP4Q96MN2 994 aa11.32□□□□□ -0.6
HERC1-212ENST00000561348 SLC9A7Q96T83 725 aa11.32□□□□□ -0.6
HERC1-212ENST00000561348 ZNF576Q9H609 170 aa11.32□□□□□ -0.6
HERC1-212ENST00000561348 AGO3Q9H9G7 860 aaKnown RBP11.32□□□□□ -0.6
HERC1-212ENST00000561348 CYP26B1Q9NR63 512 aa11.32□□□□□ -0.6
HERC1-212ENST00000561348 WRAP73Q9P2S5 460 aaPredicted RBP11.32□□□□□ -0.6
HERC1-212ENST00000561348 LRWD1Q9UFC0 647 aa11.32□□□□□ -0.6
HERC1-212ENST00000561348 MTUS1Q9ULD2 1270 aa11.32□□□□□ -0.6
HERC1-212ENST00000561348 YBX2Q9Y2T7 364 aaKnown RBP11.32□□□□□ -0.6
HERC1-212ENST00000561348 LOXHD1Q8IVV2 1947 aa11.31□□□□□ -0.6
HERC1-212ENST00000561348 DENND3A2RUS2 1198 aa11.31□□□□□ -0.6
HERC1-212ENST00000561348 EFCAB14O75071 495 aa11.31□□□□□ -0.6
HERC1-212ENST00000561348 CSDE1O75534 798 aaKnown RBP11.31□□□□□ -0.6
HERC1-212ENST00000561348 CA3P07451 260 aa11.31□□□□□ -0.6
HERC1-212ENST00000561348 SYT1P21579 422 aa11.31□□□□□ -0.6
HERC1-212ENST00000561348 FGFR4P22455 802 aa11.31□□□□□ -0.6
HERC1-212ENST00000561348 CCT6AP40227 531 aaKnown RBP11.31□□□□□ -0.6
HERC1-212ENST00000561348 SPIRE1Q08AE8 756 aa11.31□□□□□ -0.6
HERC1-212ENST00000561348 MGAT3Q09327 533 aa11.31□□□□□ -0.6
HERC1-212ENST00000561348 DRP2Q13474 957 aa11.31□□□□□ -0.6
HERC1-212ENST00000561348 FOXD4L6Q3SYB3 417 aaPredicted RBP11.31□□□□□ -0.6
HERC1-212ENST00000561348 RILPL1Q5EBL4 403 aa11.31□□□□□ -0.6
HERC1-212ENST00000561348 RASIP1Q5U651 963 aa11.31□□□□□ -0.6
HERC1-212ENST00000561348 FOXD4L3Q6VB84 417 aaPredicted RBP11.31□□□□□ -0.6
HERC1-212ENST00000561348 DTHD1Q6ZMT9 781 aa11.31□□□□□ -0.6
HERC1-212ENST00000561348 TSHZ1Q6ZSZ6 1077 aa11.31□□□□□ -0.6
HERC1-212ENST00000561348 KSR1Q8IVT5 923 aa11.31□□□□□ -0.6
HERC1-212ENST00000561348 APBB2Q92870 758 aa11.31□□□□□ -0.6
HERC1-212ENST00000561348 TMEM143Q96AN5 459 aa11.31□□□□□ -0.6
HERC1-212ENST00000561348 NIFKQ9BYG3 293 aaKnown RBP11.31□□□□□ -0.6
HERC1-212ENST00000561348 SEMA6BQ9H3T3 888 aa11.31□□□□□ -0.6
HERC1-212ENST00000561348 SUCLA2Q9P2R7 463 aaPredicted RBP11.31□□□□□ -0.6
HERC1-212ENST00000561348 PADI3Q9ULW8 664 aa11.31□□□□□ -0.6
HERC1-212ENST00000561348 NOC2LQ9Y3T9 749 aaKnown RBP11.31□□□□□ -0.6
HERC1-212ENST00000561348 GBF1Q92538 1859 aa11.3□□□□□ -0.6
HERC1-212ENST00000561348 VWA3AA6NCI4 1184 aa11.3□□□□□ -0.6
HERC1-212ENST00000561348 PP2D1A8MPX8 630 aa11.3□□□□□ -0.6
HERC1-212ENST00000561348 MED24O75448 989 aa11.3□□□□□ -0.6
HERC1-212ENST00000561348 STBD1O95210 358 aa11.3□□□□□ -0.6
HERC1-212ENST00000561348 SRGAP2CP0DJJ0 459 aa11.3□□□□□ -0.6
HERC1-212ENST00000561348 IGFBP4P22692 258 aa11.3□□□□□ -0.6
HERC1-212ENST00000561348 CDC25AP30304 524 aa11.3□□□□□ -0.6
HERC1-212ENST00000561348 FAM173BQ6P4H8 233 aa11.3□□□□□ -0.6
HERC1-212ENST00000561348 POTEGQ6S5H5 508 aa11.3□□□□□ -0.6
HERC1-212ENST00000561348 RPAINQ86UA6 219 aa11.3□□□□□ -0.6
HERC1-212ENST00000561348 C4orf19Q8IY42 314 aa11.3□□□□□ -0.6
HERC1-212ENST00000561348 MICALL1Q8N3F8 863 aa11.3□□□□□ -0.6
HERC1-212ENST00000561348 RNF169Q8NCN4 708 aa11.3□□□□□ -0.6
HERC1-212ENST00000561348 RASSF8Q8NHQ8 419 aa11.3□□□□□ -0.6
HERC1-212ENST00000561348 PHOSPHO2Q8TCD6 241 aa11.3□□□□□ -0.6
HERC1-212ENST00000561348 SNX29Q8TEQ0 813 aa11.3□□□□□ -0.6
HERC1-212ENST00000561348 TMEM40Q8WWA1 233 aa11.3□□□□□ -0.6
HERC1-212ENST00000561348 PPM1EQ8WY54 764 aa11.3□□□□□ -0.6
HERC1-212ENST00000561348 MYLIPQ8WY64 445 aa11.3□□□□□ -0.6
HERC1-212ENST00000561348 YME1L1Q96TA2 773 aa11.3□□□□□ -0.6
HERC1-212ENST00000561348 PLIN2Q99541 437 aa11.3□□□□□ -0.6
HERC1-212ENST00000561348 RAB34Q9BZG1 259 aa11.3□□□□□ -0.6
HERC1-212ENST00000561348 TTYH1Q9H313 450 aaPredicted RBP11.3□□□□□ -0.6
HERC1-212ENST00000561348 PRDM12Q9H4Q4 367 aa11.3□□□□□ -0.6
HERC1-212ENST00000561348 LRFN2Q9ULH4 789 aa11.3□□□□□ -0.6
HERC1-212ENST00000561348 ST3GAL5Q9UNP4 418 aa11.3□□□□□ -0.6
HERC1-212ENST00000561348 PCDHA11Q9Y5I1 949 aa11.3□□□□□ -0.6
HERC1-212ENST00000561348 A0A087WZ62 844 aa11.29□□□□□ -0.6
HERC1-212ENST00000561348 LCHNA4D1U4 455 aa11.29□□□□□ -0.6
HERC1-212ENST00000561348 USO1O60763 962 aaKnown RBP11.29□□□□□ -0.6
HERC1-212ENST00000561348 MAFO75444 373 aaPredicted RBP11.29□□□□□ -0.6
HERC1-212ENST00000561348 SSBP05455 408 aaKnown RBP eCLIP11.29□□□□□ -0.6
HERC1-212ENST00000561348 CRYBB1P53674 252 aaPredicted RBP11.29□□□□□ -0.6
HERC1-212ENST00000561348 ORC2Q13416 577 aaPredicted RBP11.29□□□□□ -0.6
HERC1-212ENST00000561348 GRIN2CQ14957 1233 aa11.29□□□□□ -0.6
HERC1-212ENST00000561348 EMC2Q15006 297 aa11.29□□□□□ -0.6
HERC1-212ENST00000561348 TARBP2Q15633 366 aaKnown RBP11.29□□□□□ -0.6
HERC1-212ENST00000561348 KRT79Q5XKE5 535 aa11.29□□□□□ -0.6
HERC1-212ENST00000561348 CATSPER3Q86XQ3 398 aa11.29□□□□□ -0.6
HERC1-212ENST00000561348 NEK9Q8TD19 979 aa11.29□□□□□ -0.6
HERC1-212ENST00000561348 ARNTL2Q8WYA1 636 aa11.29□□□□□ -0.6
HERC1-212ENST00000561348 SNX21Q969T3 373 aa11.29□□□□□ -0.6
HERC1-212ENST00000561348 INTS4Q96HW7 963 aaKnown RBP11.29□□□□□ -0.6
HERC1-212ENST00000561348 CDK5RAP3Q96JB5 506 aa11.29□□□□□ -0.6
HERC1-212ENST00000561348 MTRQ99707 1265 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms