RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 LINC01465Q8N7H1 131 aa19.37■□□□□ 0.69
CDC42BPB-208ENST00000561271 BANK1Q8NDB2 785 aa19.37■□□□□ 0.69
CDC42BPB-208ENST00000561271 SYMPKQ92797 1274 aaKnown RBP19.37■□□□□ 0.69
CDC42BPB-208ENST00000561271 MAP7D2Q96T17 732 aa19.37■□□□□ 0.69
CDC42BPB-208ENST00000561271 KCNMB3Q9NPA1 279 aa19.37■□□□□ 0.69
CDC42BPB-208ENST00000561271 LMCD1Q9NZU5 365 aa19.37■□□□□ 0.69
CDC42BPB-208ENST00000561271 AKT3Q9Y243 479 aa19.37■□□□□ 0.69
CDC42BPB-208ENST00000561271 MUC3AQ02505 3323 aa19.36■□□□□ 0.69
CDC42BPB-208ENST00000561271 MAGEB2O15479 319 aa19.36■□□□□ 0.69
CDC42BPB-208ENST00000561271 CCNT1O60563 726 aaKnown RBP19.36■□□□□ 0.69
CDC42BPB-208ENST00000561271 GPR32O75388 356 aa19.36■□□□□ 0.69
CDC42BPB-208ENST00000561271 DGKIO75912 1065 aa19.36■□□□□ 0.69
CDC42BPB-208ENST00000561271 LINC00271P0C7V0 271 aa19.36■□□□□ 0.69
CDC42BPB-208ENST00000561271 GCFC2P16383 781 aaKnown RBP19.36■□□□□ 0.69
CDC42BPB-208ENST00000561271 GATMP50440 423 aa19.36■□□□□ 0.69
CDC42BPB-208ENST00000561271 KCNQ1P51787 676 aa19.36■□□□□ 0.69
CDC42BPB-208ENST00000561271 GPM6BQ13491 265 aa19.36■□□□□ 0.69
CDC42BPB-208ENST00000561271 BTG3Q14201 252 aaPredicted RBP19.36■□□□□ 0.69
CDC42BPB-208ENST00000561271 MTERF2Q49AM1 385 aa19.36■□□□□ 0.69
CDC42BPB-208ENST00000561271 EFCAB12Q6NXP0 572 aa19.36■□□□□ 0.69
CDC42BPB-208ENST00000561271 FAM228AQ86W67 206 aa19.36■□□□□ 0.69
CDC42BPB-208ENST00000561271 POTEDQ86YR6 584 aa19.36■□□□□ 0.69
CDC42BPB-208ENST00000561271 NPAS4Q8IUM7 802 aa19.36■□□□□ 0.69
CDC42BPB-208ENST00000561271 ZNF689Q96CS4 500 aaPredicted RBP19.36■□□□□ 0.69
CDC42BPB-208ENST00000561271 ZNF668Q96K58 619 aaPredicted RBP19.36■□□□□ 0.69
CDC42BPB-208ENST00000561271 SH2D3AQ9BRG2 576 aa19.36■□□□□ 0.69
CDC42BPB-208ENST00000561271 NRBP2Q9NSY0 501 aa19.36■□□□□ 0.69
CDC42BPB-208ENST00000561271 VAV3Q9UKW4 847 aa19.36■□□□□ 0.69
CDC42BPB-208ENST00000561271 H3BNC9 293 aa19.35■□□□□ 0.69
CDC42BPB-208ENST00000561271 EML1O00423 815 aa19.35■□□□□ 0.69
CDC42BPB-208ENST00000561271 CRYBB1P53674 252 aaPredicted RBP19.35■□□□□ 0.69
CDC42BPB-208ENST00000561271 NLRP11P59045 1033 aaKnown RBP19.35■□□□□ 0.69
CDC42BPB-208ENST00000561271 TBC1D8BQ0IIM8 1120 aa19.35■□□□□ 0.69
CDC42BPB-208ENST00000561271 C8orf34Q49A92 452 aa19.35■□□□□ 0.69
CDC42BPB-208ENST00000561271 PAN2Q504Q3 1202 aaKnown RBP19.35■□□□□ 0.69
CDC42BPB-208ENST00000561271 PPP4R3AQ6IN85 833 aa19.35■□□□□ 0.69
CDC42BPB-208ENST00000561271 CRIPAKQ8N1N5 446 aa19.35■□□□□ 0.69
CDC42BPB-208ENST00000561271 IL27Q8NEV9 243 aa19.35■□□□□ 0.69
CDC42BPB-208ENST00000561271 ADAMTS19Q8TE59 1207 aa19.35■□□□□ 0.69
CDC42BPB-208ENST00000561271 TNFRSF25Q93038 417 aa19.35■□□□□ 0.69
CDC42BPB-208ENST00000561271 BRMS1Q9HCU9 246 aa19.35■□□□□ 0.69
CDC42BPB-208ENST00000561271 ST3GAL5Q9UNP4 418 aa19.35■□□□□ 0.69
CDC42BPB-208ENST00000561271 TDRD15B5MCY1 1934 aaKnown RBP19.35■□□□□ 0.69
CDC42BPB-208ENST00000561271 DENND3A2RUS2 1198 aa19.34■□□□□ 0.69
CDC42BPB-208ENST00000561271 STBD1O95210 358 aa19.34■□□□□ 0.69
CDC42BPB-208ENST00000561271 PPP2R5CQ13362 524 aa19.34■□□□□ 0.69
CDC42BPB-208ENST00000561271 DRP2Q13474 957 aa19.34■□□□□ 0.69
CDC42BPB-208ENST00000561271 TARBP2Q15633 366 aaKnown RBP19.34■□□□□ 0.69
CDC42BPB-208ENST00000561271 MRPL38Q96DV4 380 aaKnown RBP19.34■□□□□ 0.69
CDC42BPB-208ENST00000561271 ADAM2Q99965 735 aa19.34■□□□□ 0.69
CDC42BPB-208ENST00000561271 MRPL42Q9Y6G3 142 aaKnown RBP19.34■□□□□ 0.69
CDC42BPB-208ENST00000561271 MMP1P03956 469 aa19.33■□□□□ 0.68
CDC42BPB-208ENST00000561271 STAG3L1P0CL83 205 aa19.33■□□□□ 0.68
CDC42BPB-208ENST00000561271 TMOD1P28289 359 aa19.33■□□□□ 0.68
CDC42BPB-208ENST00000561271 SARSP49591 514 aaKnown RBP19.33■□□□□ 0.68
CDC42BPB-208ENST00000561271 PTPROQ16827 1216 aa19.33■□□□□ 0.68
CDC42BPB-208ENST00000561271 XKR3Q5GH77 459 aa19.33■□□□□ 0.68
CDC42BPB-208ENST00000561271 PLA2G4FQ68DD2 849 aa19.33■□□□□ 0.68
CDC42BPB-208ENST00000561271 CMTR2Q8IYT2 770 aaKnown RBP19.33■□□□□ 0.68
CDC42BPB-208ENST00000561271 HAS1Q92839 578 aa19.33■□□□□ 0.68
CDC42BPB-208ENST00000561271 HLA-CQ95604 372 aa19.33■□□□□ 0.68
CDC42BPB-208ENST00000561271 FAM20AQ96MK3 541 aa19.33■□□□□ 0.68
CDC42BPB-208ENST00000561271 SCLT1Q96NL6 688 aa19.33■□□□□ 0.68
CDC42BPB-208ENST00000561271 LRFN2Q9ULH4 789 aa19.33■□□□□ 0.68
CDC42BPB-208ENST00000561271 COG5Q9UP83 839 aa19.33■□□□□ 0.68
CDC42BPB-208ENST00000561271 GPR182O15218 404 aa19.32■□□□□ 0.68
CDC42BPB-208ENST00000561271 CSPG5O95196 566 aa19.32■□□□□ 0.68
CDC42BPB-208ENST00000561271 GPC3P51654 580 aa19.32■□□□□ 0.68
CDC42BPB-208ENST00000561271 PSMC5P62195 406 aa19.32■□□□□ 0.68
CDC42BPB-208ENST00000561271 AAK1Q2M2I8 961 aa19.32■□□□□ 0.68
CDC42BPB-208ENST00000561271 TIGD5Q53EQ6 642 aa19.32■□□□□ 0.68
CDC42BPB-208ENST00000561271 ODR4Q5SWX8 454 aa19.32■□□□□ 0.68
CDC42BPB-208ENST00000561271 CCDC83Q8IWF9 413 aa19.32■□□□□ 0.68
CDC42BPB-208ENST00000561271 DIS3L2Q8IYB7 885 aaKnown RBP19.32■□□□□ 0.68
CDC42BPB-208ENST00000561271 CLP1Q92989 425 aaKnown RBP19.32■□□□□ 0.68
CDC42BPB-208ENST00000561271 CEP89Q96ST8 783 aa19.32■□□□□ 0.68
CDC42BPB-208ENST00000561271 NAP1L4Q99733 375 aaKnown RBP19.32■□□□□ 0.68
CDC42BPB-208ENST00000561271 C11orf84Q9BUA3 381 aaPredicted RBP19.32■□□□□ 0.68
CDC42BPB-208ENST00000561271 NIFKQ9BYG3 293 aaKnown RBP19.32■□□□□ 0.68
CDC42BPB-208ENST00000561271 ADAMTS10Q9H324 1103 aa19.32■□□□□ 0.68
CDC42BPB-208ENST00000561271 RWDD3Q9Y3V2 267 aa19.32■□□□□ 0.68
CDC42BPB-208ENST00000561271 MYH11P35749 1972 aa19.32■□□□□ 0.68
CDC42BPB-208ENST00000561271 DDX11L8A8MPP1 907 aa19.31■□□□□ 0.68
CDC42BPB-208ENST00000561271 BTBD18B2RXH4 712 aa19.31■□□□□ 0.68
CDC42BPB-208ENST00000561271 C9IYK1 514 aa19.31■□□□□ 0.68
CDC42BPB-208ENST00000561271 C5orf67F2Z3F1 127 aa19.31■□□□□ 0.68
CDC42BPB-208ENST00000561271 WNT7AO00755 349 aa19.31■□□□□ 0.68
CDC42BPB-208ENST00000561271 MARCH6O60337 910 aa19.31■□□□□ 0.68
CDC42BPB-208ENST00000561271 BMPR1AP36894 532 aa19.31■□□□□ 0.68
CDC42BPB-208ENST00000561271 TRIM29Q14134 588 aa19.31■□□□□ 0.68
CDC42BPB-208ENST00000561271 NCAPH2Q6IBW4 605 aa19.31■□□□□ 0.68
CDC42BPB-208ENST00000561271 ANO5Q75V66 913 aa19.31■□□□□ 0.68
CDC42BPB-208ENST00000561271 NECAB3Q96P71 396 aaPredicted RBP19.31■□□□□ 0.68
CDC42BPB-208ENST00000561271 RGS18Q9NS28 235 aa19.31■□□□□ 0.68
CDC42BPB-208ENST00000561271 C1orf112Q9NSG2 853 aa19.31■□□□□ 0.68
CDC42BPB-208ENST00000561271 WRAP73Q9P2S5 460 aaPredicted RBP19.31■□□□□ 0.68
CDC42BPB-208ENST00000561271 LIMCH1Q9UPQ0 1083 aa19.31■□□□□ 0.68
CDC42BPB-208ENST00000561271 TBX3O15119 743 aa19.3■□□□□ 0.68
CDC42BPB-208ENST00000561271 GRM6O15303 877 aa19.3■□□□□ 0.68
CDC42BPB-208ENST00000561271 BMP1P13497 986 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms