RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 PLCL1Q15111 1095 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 GPR19Q15760 415 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 FSCN1Q16658 493 aaKnown RBP2.33□□□□□ -2.04
RTF1-207ENST00000561076 SKIDA1Q1XH10 827 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 ARL13BQ3SXY8 428 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 TUBB8Q3ZCM7 444 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 ZACNQ401N2 412 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 TTC31Q49AM3 519 aaPredicted RBP2.33□□□□□ -2.04
RTF1-207ENST00000561076 CCDC184Q52MB2 194 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 SLC45A4Q5BKX6 768 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 CT83Q5H943 113 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 FAM182BQ5T319 152 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 MBNL2Q5VZF2 373 aaKnown RBP2.33□□□□□ -2.04
RTF1-207ENST00000561076 NUTM2GQ5VZR2 741 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 SPRYD7Q5W111 196 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 HAUS3Q68CZ6 603 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 KLHDC10Q6PID8 442 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 BRINP3Q76B58 766 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 BTN2A1Q7KYR7 527 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 BEND5Q7L4P6 421 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 DYMQ7RTS9 669 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 OVCH1Q7RTY7 1134 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 GPR155Q7Z3F1 870 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 C2CD5Q86YS7 1000 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 CCDC117Q8IWD4 279 aaPredicted RBP2.33□□□□□ -2.04
RTF1-207ENST00000561076 CMIPQ8IY22 773 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 KIAA0319LQ8IZA0 1049 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 NAT16Q8N8M0 369 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 MARCH10Q8NA82 808 aaPredicted RBP2.33□□□□□ -2.04
RTF1-207ENST00000561076 KLHDC4Q8TBB5 520 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 NUDT8Q8WV74 236 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 RNF141Q8WVD5 230 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 BRI3BPQ8WY22 251 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 GOLGA1Q92805 767 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 ERCC4Q92889 916 aaPredicted RBP2.33□□□□□ -2.04
RTF1-207ENST00000561076 CCDC47Q96A33 483 aaKnown RBP2.33□□□□□ -2.04
RTF1-207ENST00000561076 KIFC2Q96AC6 838 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 RGMAQ96B86 450 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 COA7Q96BR5 231 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 TBC1D31Q96DN5 1066 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 WDR89Q96FK6 387 aaPredicted RBP2.33□□□□□ -2.04
RTF1-207ENST00000561076 APIPQ96GX9 242 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 ZMAT2Q96NC0 199 aaKnown RBP2.33□□□□□ -2.04
RTF1-207ENST00000561076 MPHOSPH8Q99549 860 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 ELF4Q99607 663 aaPredicted RBP2.33□□□□□ -2.04
RTF1-207ENST00000561076 BAG1Q99933 345 aaPredicted RBP2.33□□□□□ -2.04
RTF1-207ENST00000561076 CHCHD6Q9BRQ6 235 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 NOL10Q9BSC4 688 aaKnown RBP2.33□□□□□ -2.04
RTF1-207ENST00000561076 CENPOQ9BU64 300 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 WDR18Q9BV38 432 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 CARD10Q9BWT7 1032 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 TTLL2Q9BWV7 592 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 TMEM120AQ9BXJ8 343 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 EIF2AQ9BY44 585 aaKnown RBP2.33□□□□□ -2.04
RTF1-207ENST00000561076 ANO3Q9BYT9 981 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 UNKQ9C0B0 810 aaKnown RBP2.33□□□□□ -2.04
RTF1-207ENST00000561076 SMOC1Q9H4F8 434 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 GRPEL1Q9HAV7 217 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 JPH1Q9HDC5 661 aaPredicted RBP2.33□□□□□ -2.04
RTF1-207ENST00000561076 SARS2Q9NP81 518 aaKnown RBP2.33□□□□□ -2.04
RTF1-207ENST00000561076 DCP1AQ9NPI6 582 aaPredicted RBP2.33□□□□□ -2.04
RTF1-207ENST00000561076 WASH6PQ9NQA3 447 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 PDLIM7Q9NR12 457 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 HAUS2Q9NVX0 235 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 CLDND1Q9NY35 253 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 CACNA2D2Q9NY47 1150 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 PRR13Q9NZ81 148 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 CLEC1BQ9P126 229 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 KIF17Q9P2E2 1029 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 ACAD8Q9UKU7 415 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 ZHX1Q9UKY1 873 aaPredicted RBP2.33□□□□□ -2.04
RTF1-207ENST00000561076 PCOLCE2Q9UKZ9 415 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 NSFL1CQ9UNZ2 370 aaKnown RBP2.33□□□□□ -2.04
RTF1-207ENST00000561076 SRPK3Q9UPE1 567 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 TMX2Q9Y320 296 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 NR2E3Q9Y5X4 410 aa2.33□□□□□ -2.04
RTF1-207ENST00000561076 GTPBP10A4D1E9 387 aaKnown RBP2.32□□□□□ -2.04
RTF1-207ENST00000561076 HMX3A6NHT5 357 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 CCDC154A6NI56 674 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 B4E171 279 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 H0Y8X5 98 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 TNFRSF10AO00220 468 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 TOR1BO14657 336 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 SLC16A6O15403 523 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 DAPK3O43293 454 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 THAP12O43422 761 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 TGM5O43548 720 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 NPHS1O60500 1241 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 DKC1O60832 514 aaKnown RBP eCLIP2.32□□□□□ -2.04
RTF1-207ENST00000561076 TSPAN9O75954 239 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 FGF18O76093 207 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 SLITRK5O94991 958 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 ARIH2O95376 493 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 TBX18O95935 607 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 ALDH2P05091 517 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 GSTM1P09488 218 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 CLEC2LP0C7M8 214 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 HARSP12081 509 aaKnown RBP2.32□□□□□ -2.04
RTF1-207ENST00000561076 SELPP16109 830 aa2.32□□□□□ -2.04
RTF1-207ENST00000561076 PDE6AP16499 860 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms