RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 KLHL23Q8NBE8 558 aa12.16□□□□□ -0.46
TPM1-227ENST00000560970 SMRP1Q8NCR6 262 aa12.16□□□□□ -0.46
TPM1-227ENST00000560970 CYP2W1Q8TAV3 490 aa12.16□□□□□ -0.46
TPM1-227ENST00000560970 MSLNLQ96KJ4 702 aa12.16□□□□□ -0.46
TPM1-227ENST00000560970 TMX1Q9H3N1 280 aa12.16□□□□□ -0.46
TPM1-227ENST00000560970 GJB4Q9NTQ9 266 aa12.16□□□□□ -0.46
TPM1-227ENST00000560970 MUTYHQ9UIF7 546 aa12.16□□□□□ -0.46
TPM1-227ENST00000560970 LRFN2Q9ULH4 789 aa12.16□□□□□ -0.46
TPM1-227ENST00000560970 IGKV6D-21A0A0A0MT36 114 aa12.15□□□□□ -0.46
TPM1-227ENST00000560970 FSD2A1L4K1 749 aa12.15□□□□□ -0.46
TPM1-227ENST00000560970 DDX39AO00148 427 aaKnown RBP12.15□□□□□ -0.46
TPM1-227ENST00000560970 BACH1O14867 736 aa12.15□□□□□ -0.46
TPM1-227ENST00000560970 EYA4O95677 639 aa12.15□□□□□ -0.46
TPM1-227ENST00000560970 ARP10275 920 aa12.15□□□□□ -0.46
TPM1-227ENST00000560970 GATMP50440 423 aa12.15□□□□□ -0.46
TPM1-227ENST00000560970 SETQ01105 290 aaPredicted RBP12.15□□□□□ -0.46
TPM1-227ENST00000560970 RABEP1Q15276 862 aa12.15□□□□□ -0.46
TPM1-227ENST00000560970 TMEM266Q2M3C6 531 aa12.15□□□□□ -0.46
TPM1-227ENST00000560970 RTN4RL1Q86UN2 441 aaPredicted RBP12.15□□□□□ -0.46
TPM1-227ENST00000560970 CCDC60Q8IWA6 550 aaPredicted RBP12.15□□□□□ -0.46
TPM1-227ENST00000560970 CCDC83Q8IWF9 413 aa12.15□□□□□ -0.46
TPM1-227ENST00000560970 NME8Q8N427 588 aa12.15□□□□□ -0.46
TPM1-227ENST00000560970 CCDC148Q8NFR7 591 aa12.15□□□□□ -0.46
TPM1-227ENST00000560970 ATP8B4Q8TF62 1192 aa12.15□□□□□ -0.46
TPM1-227ENST00000560970 POF1BQ8WVV4 589 aa12.15□□□□□ -0.46
TPM1-227ENST00000560970 GLT8D2Q9H1C3 349 aa12.15□□□□□ -0.46
TPM1-227ENST00000560970 IGFLR1Q9H665 355 aa12.15□□□□□ -0.46
TPM1-227ENST00000560970 UPF2Q9HAU5 1272 aaKnown RBP12.15□□□□□ -0.46
TPM1-227ENST00000560970 ERVK-5Q9HDB9 667 aa12.15□□□□□ -0.46
TPM1-227ENST00000560970 C1orf112Q9NSG2 853 aa12.15□□□□□ -0.46
TPM1-227ENST00000560970 LIMCH1Q9UPQ0 1083 aa12.15□□□□□ -0.46
TPM1-227ENST00000560970 DENND3A2RUS2 1198 aa12.14□□□□□ -0.47
TPM1-227ENST00000560970 EDIL3O43854 480 aa12.14□□□□□ -0.47
TPM1-227ENST00000560970 HBP1O60381 514 aa12.14□□□□□ -0.47
TPM1-227ENST00000560970 RPS6KA5O75582 802 aa12.14□□□□□ -0.47
TPM1-227ENST00000560970 CDKL5O76039 1030 aa12.14□□□□□ -0.47
TPM1-227ENST00000560970 ATG7O95352 703 aa12.14□□□□□ -0.47
TPM1-227ENST00000560970 GLP2RO95838 553 aa12.14□□□□□ -0.47
TPM1-227ENST00000560970 CCNE2O96020 404 aa12.14□□□□□ -0.47
TPM1-227ENST00000560970 NRIP1P48552 1158 aa12.14□□□□□ -0.47
TPM1-227ENST00000560970 UBE3AQ05086 875 aa12.14□□□□□ -0.47
TPM1-227ENST00000560970 COASYQ13057 564 aa12.14□□□□□ -0.47
TPM1-227ENST00000560970 ADAM15Q13444 863 aa12.14□□□□□ -0.47
TPM1-227ENST00000560970 ODR4Q5SWX8 454 aa12.14□□□□□ -0.47
TPM1-227ENST00000560970 HFE2Q6ZVN8 426 aa12.14□□□□□ -0.47
TPM1-227ENST00000560970 RNF135Q8IUD6 432 aa12.14□□□□□ -0.47
TPM1-227ENST00000560970 REXO1Q8N1G1 1221 aaKnown RBP12.14□□□□□ -0.47
TPM1-227ENST00000560970 SPPL3Q8TCT6 385 aa12.14□□□□□ -0.47
TPM1-227ENST00000560970 CCDC12Q8WUD4 166 aaPredicted RBP12.14□□□□□ -0.47
TPM1-227ENST00000560970 CRYGNQ8WXF5 182 aa12.14□□□□□ -0.47
TPM1-227ENST00000560970 C6orf50Q9HD87 102 aa12.14□□□□□ -0.47
TPM1-227ENST00000560970 SH3GLB2Q9NR46 395 aa12.14□□□□□ -0.47
TPM1-227ENST00000560970 TLR9Q9NR96 1032 aa12.14□□□□□ -0.47
TPM1-227ENST00000560970 ORC3Q9UBD5 711 aaPredicted RBP12.14□□□□□ -0.47
TPM1-227ENST00000560970 KCNJ14Q9UNX9 436 aa12.14□□□□□ -0.47
TPM1-227ENST00000560970 GINS2Q9Y248 185 aa12.14□□□□□ -0.47
TPM1-227ENST00000560970 C2orf16Q68DN1 1984 aa12.14□□□□□ -0.47
TPM1-227ENST00000560970 M0R2N6 131 aa12.13□□□□□ -0.47
TPM1-227ENST00000560970 MEIS1O00470 390 aa12.13□□□□□ -0.47
TPM1-227ENST00000560970 MGEA5O60502 916 aa12.13□□□□□ -0.47
TPM1-227ENST00000560970 IBSPP21815 317 aaPredicted RBP12.13□□□□□ -0.47
TPM1-227ENST00000560970 KLRC1P26715 233 aa12.13□□□□□ -0.47
TPM1-227ENST00000560970 GNA11P29992 359 aa12.13□□□□□ -0.47
TPM1-227ENST00000560970 ZNF76P36508 570 aa12.13□□□□□ -0.47
TPM1-227ENST00000560970 FOSBP53539 338 aa12.13□□□□□ -0.47
TPM1-227ENST00000560970 NLRP5P59047 1200 aa12.13□□□□□ -0.47
TPM1-227ENST00000560970 NHLH1Q02575 133 aa12.13□□□□□ -0.47
TPM1-227ENST00000560970 NFX1Q12986 1120 aaKnown RBP12.13□□□□□ -0.47
TPM1-227ENST00000560970 SPOUT1Q5T280 376 aaKnown RBP12.13□□□□□ -0.47
TPM1-227ENST00000560970 MIS18BP1Q6P0N0 1132 aa12.13□□□□□ -0.47
TPM1-227ENST00000560970 PDXDC2PQ6P474 469 aa12.13□□□□□ -0.47
TPM1-227ENST00000560970 DAGLBQ8NCG7 672 aa12.13□□□□□ -0.47
TPM1-227ENST00000560970 TMEM40Q8WWA1 233 aa12.13□□□□□ -0.47
TPM1-227ENST00000560970 ZNF302Q9NR11 478 aa12.13□□□□□ -0.47
TPM1-227ENST00000560970 AAASQ9NRG9 546 aa12.13□□□□□ -0.47
TPM1-227ENST00000560970 CLEC1BQ9P126 229 aa12.13□□□□□ -0.47
TPM1-227ENST00000560970 TCEAL9Q9UHQ7 104 aa12.13□□□□□ -0.47
TPM1-227ENST00000560970 BARX2Q9UMQ3 279 aaPredicted RBP12.13□□□□□ -0.47
TPM1-227ENST00000560970 PCDHB7Q9Y5E2 793 aa12.13□□□□□ -0.47
TPM1-227ENST00000560970 PCDHB12Q9Y5F1 795 aa12.13□□□□□ -0.47
TPM1-227ENST00000560970 PLXNA3P51805 1871 aa12.12□□□□□ -0.47
TPM1-227ENST00000560970 TDRD15B5MCY1 1934 aaKnown RBP12.12□□□□□ -0.47
TPM1-227ENST00000560970 IGLV3-22A0A075B6J6 115 aa12.12□□□□□ -0.47
TPM1-227ENST00000560970 ZBTB42B2RXF5 422 aa12.12□□□□□ -0.47
TPM1-227ENST00000560970 FAM86B1E9PN63 330 aa12.12□□□□□ -0.47
TPM1-227ENST00000560970 IPO5O00410 1097 aaKnown RBP12.12□□□□□ -0.47
TPM1-227ENST00000560970 GPR182O15218 404 aa12.12□□□□□ -0.47
TPM1-227ENST00000560970 C22orf31O95567 290 aa12.12□□□□□ -0.47
TPM1-227ENST00000560970 FAM86B2P0C5J1 330 aa12.12□□□□□ -0.47
TPM1-227ENST00000560970 SRGAP2BP0DMP2 458 aa12.12□□□□□ -0.47
TPM1-227ENST00000560970 LAG3P18627 525 aa12.12□□□□□ -0.47
TPM1-227ENST00000560970 ZNF484Q5JVG2 852 aa12.12□□□□□ -0.47
TPM1-227ENST00000560970 ABHD15Q6UXT9 468 aa12.12□□□□□ -0.47
TPM1-227ENST00000560970 SLC24A5Q71RS6 500 aa12.12□□□□□ -0.47
TPM1-227ENST00000560970 PLA2G4DQ86XP0 818 aa12.12□□□□□ -0.47
TPM1-227ENST00000560970 BLIDQ8IZY5 108 aa12.12□□□□□ -0.47
TPM1-227ENST00000560970 MFSD14AQ96MC6 490 aa12.12□□□□□ -0.47
TPM1-227ENST00000560970 FBXL18Q96ME1 805 aa12.12□□□□□ -0.47
TPM1-227ENST00000560970 CDCA3Q99618 268 aaPredicted RBP12.12□□□□□ -0.47
TPM1-227ENST00000560970 OSMRQ99650 979 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms