RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 EPCAMP16422 314 aa11.01□□□□□ -0.65
HERC1-210ENST00000560897 PBX3P40426 434 aa11.01□□□□□ -0.65
HERC1-210ENST00000560897 GHRHRQ02643 423 aa11.01□□□□□ -0.65
HERC1-210ENST00000560897 TRAF1Q13077 416 aa11.01□□□□□ -0.65
HERC1-210ENST00000560897 PTPN14Q15678 1187 aa11.01□□□□□ -0.65
HERC1-210ENST00000560897 DCLRE1AQ6PJP8 1040 aa11.01□□□□□ -0.65
HERC1-210ENST00000560897 POTEGQ6S5H5 508 aa11.01□□□□□ -0.65
HERC1-210ENST00000560897 MIER1Q8N108 512 aa11.01□□□□□ -0.65
HERC1-210ENST00000560897 PNMA1Q8ND90 353 aa11.01□□□□□ -0.65
HERC1-210ENST00000560897 GPR152Q8TDT2 470 aa11.01□□□□□ -0.65
HERC1-210ENST00000560897 NXPE3Q969Y0 559 aa11.01□□□□□ -0.65
HERC1-210ENST00000560897 EPC1Q9H2F5 836 aa11.01□□□□□ -0.65
HERC1-210ENST00000560897 SMARCAD1Q9H4L7 1026 aa11.01□□□□□ -0.65
HERC1-210ENST00000560897 ZSCAN32Q9NX65 697 aa11.01□□□□□ -0.65
HERC1-210ENST00000560897 DLGAP2Q9P1A6 1054 aa11.01□□□□□ -0.65
HERC1-210ENST00000560897 DAXXQ9UER7 740 aaPredicted RBP11.01□□□□□ -0.65
HERC1-210ENST00000560897 GPR182O15218 404 aa11□□□□□ -0.65
HERC1-210ENST00000560897 SMARCA5O60264 1052 aaPredicted RBP11□□□□□ -0.65
HERC1-210ENST00000560897 CCDC178Q5BJE1 867 aa11□□□□□ -0.65
HERC1-210ENST00000560897 ZMYM1Q5SVZ6 1142 aa11□□□□□ -0.65
HERC1-210ENST00000560897 MARCH8Q5T0T0 291 aa11□□□□□ -0.65
HERC1-210ENST00000560897 TSHZ3Q63HK5 1081 aa11□□□□□ -0.65
HERC1-210ENST00000560897 NLRX1Q86UT6 975 aa11□□□□□ -0.65
HERC1-210ENST00000560897 VPS52Q8N1B4 723 aa11□□□□□ -0.65
HERC1-210ENST00000560897 NME8Q8N427 588 aa11□□□□□ -0.65
HERC1-210ENST00000560897 RSAD2Q8WXG1 361 aa11□□□□□ -0.65
HERC1-210ENST00000560897 INPP4AQ96PE3 977 aaPredicted RBP11□□□□□ -0.65
HERC1-210ENST00000560897 SENP7Q9BQF6 1050 aa11□□□□□ -0.65
HERC1-210ENST00000560897 FOXQ1Q9C009 403 aa11□□□□□ -0.65
HERC1-210ENST00000560897 ELAC1Q9H777 363 aaKnown RBP11□□□□□ -0.65
HERC1-210ENST00000560897 JMJD4Q9H9V9 463 aa11□□□□□ -0.65
HERC1-210ENST00000560897 RTEL1Q9NZ71 1219 aa11□□□□□ -0.65
HERC1-210ENST00000560897 KDM3AQ9Y4C1 1321 aa11□□□□□ -0.65
HERC1-210ENST00000560897 C2orf16Q68DN1 1984 aa10.99□□□□□ -0.65
HERC1-210ENST00000560897 C9IYK1 514 aa10.99□□□□□ -0.65
HERC1-210ENST00000560897 MGEA5O60502 916 aa10.99□□□□□ -0.65
HERC1-210ENST00000560897 PROS1P07225 676 aa10.99□□□□□ -0.65
HERC1-210ENST00000560897 PCP11498 1178 aaKnown RBP10.99□□□□□ -0.65
HERC1-210ENST00000560897 INSRRP14616 1297 aa10.99□□□□□ -0.65
HERC1-210ENST00000560897 ALDH7A1P49419 539 aaKnown RBP10.99□□□□□ -0.65
HERC1-210ENST00000560897 METAP2P50579 478 aaKnown RBP eCLIP10.99□□□□□ -0.65
HERC1-210ENST00000560897 SPEM2Q0P670 501 aa10.99□□□□□ -0.65
HERC1-210ENST00000560897 IL31Q6EBC2 164 aa10.99□□□□□ -0.65
HERC1-210ENST00000560897 ELMSAN1Q6PJG2 1045 aa10.99□□□□□ -0.65
HERC1-210ENST00000560897 C15orf39Q6ZRI6 1047 aa10.99□□□□□ -0.65
HERC1-210ENST00000560897 MFSD6Q6ZSS7 791 aa10.99□□□□□ -0.65
HERC1-210ENST00000560897 IQCA1Q86XH1 822 aa10.99□□□□□ -0.65
HERC1-210ENST00000560897 DGKHQ86XP1 1220 aa10.99□□□□□ -0.65
HERC1-210ENST00000560897 SLC39A11Q8N1S5 342 aa10.99□□□□□ -0.65
HERC1-210ENST00000560897 SLC44A3Q8N4M1 653 aa10.99□□□□□ -0.65
HERC1-210ENST00000560897 SEPT1Q8WYJ6 367 aa10.99□□□□□ -0.65
HERC1-210ENST00000560897 AZI2Q9H6S1 392 aa10.99□□□□□ -0.65
HERC1-210ENST00000560897 PCDHA2Q9Y5H9 948 aa10.99□□□□□ -0.65
HERC1-210ENST00000560897 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.99□□□□□ -0.65
HERC1-210ENST00000560897 CNOT1A5YKK6 2376 aaKnown RBP10.99□□□□□ -0.65
HERC1-210ENST00000560897 CARNS1A5YM72 827 aa10.98□□□□□ -0.65
HERC1-210ENST00000560897 OPLAHO14841 1288 aa10.98□□□□□ -0.65
HERC1-210ENST00000560897 MAGEA9P43362 315 aa10.98□□□□□ -0.65
HERC1-210ENST00000560897 MRPS9P82933 396 aaKnown RBP10.98□□□□□ -0.65
HERC1-210ENST00000560897 MAML2Q8IZL2 1156 aaPredicted RBP10.98□□□□□ -0.65
HERC1-210ENST00000560897 PANK1Q8TE04 598 aa10.98□□□□□ -0.65
HERC1-210ENST00000560897 ESR2Q92731 530 aa10.98□□□□□ -0.65
HERC1-210ENST00000560897 ZBTB10Q96DT7 871 aa10.98□□□□□ -0.65
HERC1-210ENST00000560897 CASD1Q96PB1 797 aa10.98□□□□□ -0.65
HERC1-210ENST00000560897 ZKSCAN3Q9BRR0 538 aa10.98□□□□□ -0.65
HERC1-210ENST00000560897 EMILIN2Q9BXX0 1053 aa10.98□□□□□ -0.65
HERC1-210ENST00000560897 MRPL9Q9BYD2 267 aaKnown RBP10.98□□□□□ -0.65
HERC1-210ENST00000560897 RNF41Q9H4P4 317 aaPredicted RBP10.98□□□□□ -0.65
HERC1-210ENST00000560897 PARD6AQ9NPB6 346 aa10.98□□□□□ -0.65
HERC1-210ENST00000560897 ST3GAL5Q9UNP4 418 aa10.98□□□□□ -0.65
HERC1-210ENST00000560897 NOC2LQ9Y3T9 749 aaKnown RBP10.98□□□□□ -0.65
HERC1-210ENST00000560897 PATJQ8NI35 1801 aa10.98□□□□□ -0.65
HERC1-210ENST00000560897 SMIM35A0A1B0GVV1 85 aa10.97□□□□□ -0.65
HERC1-210ENST00000560897 ZBTB5O15062 677 aa10.97□□□□□ -0.65
HERC1-210ENST00000560897 LRP3O75074 770 aa10.97□□□□□ -0.65
HERC1-210ENST00000560897 MS4A1P11836 297 aa10.97□□□□□ -0.65
HERC1-210ENST00000560897 GLULP15104 373 aa10.97□□□□□ -0.65
HERC1-210ENST00000560897 TGM1P22735 817 aa10.97□□□□□ -0.65
HERC1-210ENST00000560897 PMLP29590 882 aa10.97□□□□□ -0.65
HERC1-210ENST00000560897 HAND2P61296 217 aa10.97□□□□□ -0.65
HERC1-210ENST00000560897 SHC2P98077 582 aa10.97□□□□□ -0.65
HERC1-210ENST00000560897 SEMA3FQ13275 785 aa10.97□□□□□ -0.65
HERC1-210ENST00000560897 UBXN2BQ14CS0 331 aa10.97□□□□□ -0.65
HERC1-210ENST00000560897 LRRC55Q6ZSA7 311 aa10.97□□□□□ -0.65
HERC1-210ENST00000560897 SIRT2Q8IXJ6 389 aa10.97□□□□□ -0.65
HERC1-210ENST00000560897 RNF169Q8NCN4 708 aa10.97□□□□□ -0.65
HERC1-210ENST00000560897 ZBTB44Q8NCP5 570 aa10.97□□□□□ -0.65
HERC1-210ENST00000560897 SLC22A17Q8WUG5 538 aa10.97□□□□□ -0.65
HERC1-210ENST00000560897 AUTS2Q8WXX7 1259 aa10.97□□□□□ -0.65
HERC1-210ENST00000560897 CDHR1Q96JP9 859 aa10.97□□□□□ -0.65
HERC1-210ENST00000560897 ZBP1Q9H171 429 aa10.97□□□□□ -0.65
HERC1-210ENST00000560897 CHMP4BQ9H444 224 aaKnown RBP10.97□□□□□ -0.65
HERC1-210ENST00000560897 EPS15L1Q9UBC2 864 aa10.97□□□□□ -0.65
HERC1-210ENST00000560897 TELO2Q9Y4R8 837 aa10.97□□□□□ -0.65
HERC1-210ENST00000560897 IRAK3Q9Y616 596 aa10.97□□□□□ -0.65
HERC1-210ENST00000560897 RALGAPA1Q6GYQ0 2036 aa10.97□□□□□ -0.65
HERC1-210ENST00000560897 ASPMQ8IZT6 3477 aa10.96□□□□□ -0.65
HERC1-210ENST00000560897 CLUHO75153 1309 aa10.96□□□□□ -0.65
HERC1-210ENST00000560897 KANSL1LA0AUZ9 987 aa10.96□□□□□ -0.65
HERC1-210ENST00000560897 NT5C1B-RDH14C9J2C7 533 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms