RNA–Protein interactions for RNA: ENST00000560603.5

MARK3-221, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 4

Gene MARK3, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-221ENST00000560603 PHOX2BQ99453 314 aa13.7□□□□□ -0.22
MARK3-221ENST00000560603 TMEM117Q9H0C3 514 aa13.7□□□□□ -0.22
MARK3-221ENST00000560603 FNDC1Q4ZHG4 1894 aaPredicted RBP13.7□□□□□ -0.22
MARK3-221ENST00000560603 SMCO2A6NFE2 343 aa13.69□□□□□ -0.22
MARK3-221ENST00000560603 DDX39AO00148 427 aaKnown RBP13.69□□□□□ -0.22
MARK3-221ENST00000560603 SLC27A2O14975 620 aa13.69□□□□□ -0.22
MARK3-221ENST00000560603 AVPR2P30518 371 aa13.69□□□□□ -0.22
MARK3-221ENST00000560603 FAM189BP81408 668 aa13.69□□□□□ -0.22
MARK3-221ENST00000560603 TCF15Q12870 199 aa13.69□□□□□ -0.22
MARK3-221ENST00000560603 BMS1Q14692 1282 aaKnown RBP13.69□□□□□ -0.22
MARK3-221ENST00000560603 KIZQ2M2Z5 673 aa13.69□□□□□ -0.22
MARK3-221ENST00000560603 TPRNQ4KMQ1 711 aa13.69□□□□□ -0.22
MARK3-221ENST00000560603 CES5AQ6NT32 575 aa13.69□□□□□ -0.22
MARK3-221ENST00000560603 TMC7Q7Z402 723 aa13.69□□□□□ -0.22
MARK3-221ENST00000560603 VN1R2Q8NFZ6 395 aa13.69□□□□□ -0.22
MARK3-221ENST00000560603 TMEM40Q8WWA1 233 aa13.69□□□□□ -0.22
MARK3-221ENST00000560603 PGBD1Q96JS3 809 aa13.69□□□□□ -0.22
MARK3-221ENST00000560603 ZNF558Q96NG5 402 aa13.69□□□□□ -0.22
MARK3-221ENST00000560603 TCF25Q9BQ70 676 aa13.69□□□□□ -0.22
MARK3-221ENST00000560603 CDHR5Q9HBB8 845 aa13.69□□□□□ -0.22
MARK3-221ENST00000560603 CEP131Q9UPN4 1083 aa13.69□□□□□ -0.22
MARK3-221ENST00000560603 EVPLQ92817 2033 aa13.68□□□□□ -0.22
MARK3-221ENST00000560603 MAGEB2O15479 319 aa13.68□□□□□ -0.22
MARK3-221ENST00000560603 GFRA3O60609 400 aa13.68□□□□□ -0.22
MARK3-221ENST00000560603 CCNE2O96020 404 aa13.68□□□□□ -0.22
MARK3-221ENST00000560603 FGFR1P11362 822 aa13.68□□□□□ -0.22
MARK3-221ENST00000560603 ZSCAN20P17040 1043 aaPredicted RBP13.68□□□□□ -0.22
MARK3-221ENST00000560603 TMOD1P28289 359 aa13.68□□□□□ -0.22
MARK3-221ENST00000560603 RTN1Q16799 776 aa13.68□□□□□ -0.22
MARK3-221ENST00000560603 RNF20Q5VTR2 975 aa13.68□□□□□ -0.22
MARK3-221ENST00000560603 CREB3L3Q68CJ9 461 aa13.68□□□□□ -0.22
MARK3-221ENST00000560603 MCTP2Q6DN12 878 aa13.68□□□□□ -0.22
MARK3-221ENST00000560603 SWSAP1Q6NVH7 229 aa13.68□□□□□ -0.22
MARK3-221ENST00000560603 KCNT2Q6UVM3 1135 aa13.68□□□□□ -0.22
MARK3-221ENST00000560603 FAM228AQ86W67 206 aa13.68□□□□□ -0.22
MARK3-221ENST00000560603 PLA2G4DQ86XP0 818 aa13.68□□□□□ -0.22
MARK3-221ENST00000560603 CCDC60Q8IWA6 550 aaPredicted RBP13.68□□□□□ -0.22
MARK3-221ENST00000560603 LRRC43Q8N309 656 aa13.68□□□□□ -0.22
MARK3-221ENST00000560603 METTL13Q8N6R0 699 aa13.68□□□□□ -0.22
MARK3-221ENST00000560603 BBXQ8WY36 941 aaPredicted RBP13.68□□□□□ -0.22
MARK3-221ENST00000560603 CASP10Q92851 521 aa13.68□□□□□ -0.22
MARK3-221ENST00000560603 ATOH1Q92858 354 aaPredicted RBP13.68□□□□□ -0.22
MARK3-221ENST00000560603 ASIC4Q96FT7 647 aa13.68□□□□□ -0.22
MARK3-221ENST00000560603 NECTIN4Q96NY8 510 aa13.68□□□□□ -0.22
MARK3-221ENST00000560603 OSMRQ99650 979 aa13.68□□□□□ -0.22
MARK3-221ENST00000560603 LRRC2Q9BYS8 371 aa13.68□□□□□ -0.22
MARK3-221ENST00000560603 S1PR5Q9H228 398 aa13.68□□□□□ -0.22
MARK3-221ENST00000560603 CWH43Q9H720 699 aa13.68□□□□□ -0.22
MARK3-221ENST00000560603 TBC1D22BQ9NU19 505 aa13.68□□□□□ -0.22
MARK3-221ENST00000560603 BARHL2Q9NY43 387 aa13.68□□□□□ -0.22
MARK3-221ENST00000560603 CNTNAP5Q8WYK1 1306 aa13.67□□□□□ -0.22
MARK3-221ENST00000560603 IPO5O00410 1097 aaKnown RBP13.67□□□□□ -0.22
MARK3-221ENST00000560603 ZBTB43O43298 467 aa13.67□□□□□ -0.22
MARK3-221ENST00000560603 RBM10P98175 930 aaKnown RBP13.67□□□□□ -0.22
MARK3-221ENST00000560603 SETQ01105 290 aaPredicted RBP13.67□□□□□ -0.22
MARK3-221ENST00000560603 APOBRQ0VD83 1088 aa13.67□□□□□ -0.22
MARK3-221ENST00000560603 KCNC3Q14003 757 aa13.67□□□□□ -0.22
MARK3-221ENST00000560603 ZNF746Q6NUN9 644 aaPredicted RBP13.67□□□□□ -0.22
MARK3-221ENST00000560603 LLGL2Q6P1M3 1020 aa13.67□□□□□ -0.22
MARK3-221ENST00000560603 APOA5Q6Q788 366 aa13.67□□□□□ -0.22
MARK3-221ENST00000560603 SMAP1Q8IYB5 467 aaPredicted RBP13.67□□□□□ -0.22
MARK3-221ENST00000560603 UBALD2Q8IYN6 164 aa13.67□□□□□ -0.22
MARK3-221ENST00000560603 SNX27Q96L92 541 aa13.67□□□□□ -0.22
MARK3-221ENST00000560603 MAP7D2Q96T17 732 aa13.67□□□□□ -0.22
MARK3-221ENST00000560603 PPP1R16BQ96T49 567 aa13.67□□□□□ -0.22
MARK3-221ENST00000560603 LSG1Q9H089 658 aaKnown RBP13.67□□□□□ -0.22
MARK3-221ENST00000560603 TSHZ2Q9NRE2 1034 aa13.67□□□□□ -0.22
MARK3-221ENST00000560603 SPG21Q9NZD8 308 aa13.67□□□□□ -0.22
MARK3-221ENST00000560603 V9GY48 417 aaPredicted RBP13.67□□□□□ -0.22
MARK3-221ENST00000560603 FAM186AA6NE01 2351 aa13.67□□□□□ -0.22
MARK3-221ENST00000560603 WDR87Q6ZQQ6 2873 aa13.66□□□□□ -0.22
MARK3-221ENST00000560603 CARNS1A5YM72 827 aa13.66□□□□□ -0.22
MARK3-221ENST00000560603 C22orf31O95567 290 aa13.66□□□□□ -0.22
MARK3-221ENST00000560603 VTNP04004 478 aa13.66□□□□□ -0.22
MARK3-221ENST00000560603 PSAPP07602 524 aa13.66□□□□□ -0.22
MARK3-221ENST00000560603 CLK2P49760 499 aaKnown RBP13.66□□□□□ -0.22
MARK3-221ENST00000560603 VCPP55072 806 aaKnown RBP13.66□□□□□ -0.22
MARK3-221ENST00000560603 ITIH3Q06033 890 aa13.66□□□□□ -0.22
MARK3-221ENST00000560603 MTMR3Q13615 1198 aa13.66□□□□□ -0.22
MARK3-221ENST00000560603 DSC3Q14574 896 aa13.66□□□□□ -0.22
MARK3-221ENST00000560603 SMC1AQ14683 1233 aaKnown RBP13.66□□□□□ -0.22
MARK3-221ENST00000560603 TYW1BQ6NUM6 668 aa13.66□□□□□ -0.22
MARK3-221ENST00000560603 SYCE2Q6PIF2 218 aa13.66□□□□□ -0.22
MARK3-221ENST00000560603 TMEM87AQ8NBN3 555 aa13.66□□□□□ -0.22
MARK3-221ENST00000560603 FAM167AQ96KS9 214 aa13.66□□□□□ -0.22
MARK3-221ENST00000560603 RIPOR3Q96MK2 946 aa13.66□□□□□ -0.22
MARK3-221ENST00000560603 CASD1Q96PB1 797 aa13.66□□□□□ -0.22
MARK3-221ENST00000560603 ZNF577Q9BSK1 485 aa13.66□□□□□ -0.22
MARK3-221ENST00000560603 HCSTQ9UBK5 93 aa13.66□□□□□ -0.22
MARK3-221ENST00000560603 AKT3Q9Y243 479 aa13.66□□□□□ -0.22
MARK3-221ENST00000560603 MAFBQ9Y5Q3 323 aaPredicted RBP13.66□□□□□ -0.22
MARK3-221ENST00000560603 HIDE1A8MVS5 230 aa13.65□□□□□ -0.22
MARK3-221ENST00000560603 ZBTB42B2RXF5 422 aa13.65□□□□□ -0.22
MARK3-221ENST00000560603 DHX15O43143 795 aaKnown RBP13.65□□□□□ -0.22
MARK3-221ENST00000560603 GPR32O75388 356 aa13.65□□□□□ -0.22
MARK3-221ENST00000560603 CYP3A4P08684 503 aa13.65□□□□□ -0.22
MARK3-221ENST00000560603 MTHFRP42898 656 aa13.65□□□□□ -0.22
MARK3-221ENST00000560603 NECTIN1Q15223 517 aa13.65□□□□□ -0.22
MARK3-221ENST00000560603 ECHDC2Q86YB7 292 aa13.65□□□□□ -0.22
MARK3-221ENST00000560603 KREMEN2Q8NCW0 462 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms