RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 HERVK_113Q902F9 699 aa15.6■□□□□ 0.09
PKNOX1-209ENST00000560448 SCLYQ96I15 445 aa15.6■□□□□ 0.09
PKNOX1-209ENST00000560448 USP28Q96RU2 1077 aa15.6■□□□□ 0.09
PKNOX1-209ENST00000560448 FAM49AQ9H0Q0 323 aaPredicted RBP15.6■□□□□ 0.09
PKNOX1-209ENST00000560448 COLQQ9Y215 455 aaPredicted RBP15.6■□□□□ 0.09
PKNOX1-209ENST00000560448 SRPRBQ9Y5M8 271 aaKnown RBP15.6■□□□□ 0.09
PKNOX1-209ENST00000560448 ABHD14A-ACY1A0A1B0GW23 586 aa15.59■□□□□ 0.09
PKNOX1-209ENST00000560448 ASAP2O43150 1006 aa15.59■□□□□ 0.09
PKNOX1-209ENST00000560448 MED24O75448 989 aa15.59■□□□□ 0.09
PKNOX1-209ENST00000560448 IL17AQ16552 155 aa15.59■□□□□ 0.09
PKNOX1-209ENST00000560448 LRIT3Q3SXY7 679 aa15.59■□□□□ 0.09
PKNOX1-209ENST00000560448 XKR9Q5GH70 373 aa15.59■□□□□ 0.09
PKNOX1-209ENST00000560448 TMEM240Q5SV17 173 aa15.59■□□□□ 0.09
PKNOX1-209ENST00000560448 TSHZ1Q6ZSZ6 1077 aa15.59■□□□□ 0.09
PKNOX1-209ENST00000560448 TRMT1LQ7Z2T5 733 aaKnown RBP15.59■□□□□ 0.09
PKNOX1-209ENST00000560448 ZNF410Q86VK4 478 aa15.59■□□□□ 0.09
PKNOX1-209ENST00000560448 MCPH1Q8NEM0 835 aa15.59■□□□□ 0.09
PKNOX1-209ENST00000560448 KCNG4Q8TDN1 519 aa15.59■□□□□ 0.09
PKNOX1-209ENST00000560448 SEPT8Q92599 483 aa15.59■□□□□ 0.09
PKNOX1-209ENST00000560448 CELF4Q9BZC1 486 aaKnown RBP15.59■□□□□ 0.09
PKNOX1-209ENST00000560448 CLIC4Q9Y696 253 aa15.59■□□□□ 0.09
PKNOX1-209ENST00000560448 CDY2AQ9Y6F7 541 aa15.59■□□□□ 0.09
PKNOX1-209ENST00000560448 TRAK2O60296 914 aa15.58■□□□□ 0.08
PKNOX1-209ENST00000560448 NBNO60934 754 aa15.58■□□□□ 0.08
PKNOX1-209ENST00000560448 CHRNA1P02708 482 aa15.58■□□□□ 0.08
PKNOX1-209ENST00000560448 TXLNAP40222 546 aa15.58■□□□□ 0.08
PKNOX1-209ENST00000560448 UBA7P41226 1012 aa15.58■□□□□ 0.08
PKNOX1-209ENST00000560448 CRYBB1P53674 252 aaPredicted RBP15.58■□□□□ 0.08
PKNOX1-209ENST00000560448 MXD4Q14582 209 aaPredicted RBP15.58■□□□□ 0.08
PKNOX1-209ENST00000560448 PLEKHG4Q58EX7 1191 aa15.58■□□□□ 0.08
PKNOX1-209ENST00000560448 RASIP1Q5U651 963 aa15.58■□□□□ 0.08
PKNOX1-209ENST00000560448 KRI1Q8N9T8 703 aaKnown RBP15.58■□□□□ 0.08
PKNOX1-209ENST00000560448 LINC00301Q8NCQ3 95 aa15.58■□□□□ 0.08
PKNOX1-209ENST00000560448 CALML4Q96GE6 196 aa15.58■□□□□ 0.08
PKNOX1-209ENST00000560448 CDK5RAP3Q96JB5 506 aa15.58■□□□□ 0.08
PKNOX1-209ENST00000560448 MTRQ99707 1265 aa15.58■□□□□ 0.08
PKNOX1-209ENST00000560448 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.58■□□□□ 0.08
PKNOX1-209ENST00000560448 FTHL17Q9BXU8 183 aa15.58■□□□□ 0.08
PKNOX1-209ENST00000560448 INO80BQ9C086 356 aaPredicted RBP15.58■□□□□ 0.08
PKNOX1-209ENST00000560448 FTOQ9C0B1 505 aaKnown RBP eCLIP15.58■□□□□ 0.08
PKNOX1-209ENST00000560448 CCSER1Q9C0I3 900 aa15.58■□□□□ 0.08
PKNOX1-209ENST00000560448 SUGCTQ9HAC7 445 aa15.58■□□□□ 0.08
PKNOX1-209ENST00000560448 ATP6V0A4Q9HBG4 840 aa15.58■□□□□ 0.08
PKNOX1-209ENST00000560448 KCND2Q9NZV8 630 aa15.58■□□□□ 0.08
PKNOX1-209ENST00000560448 DNM3Q9UQ16 869 aa15.58■□□□□ 0.08
PKNOX1-209ENST00000560448 AKT3Q9Y243 479 aa15.58■□□□□ 0.08
PKNOX1-209ENST00000560448 CTSHP09668 335 aa15.57■□□□□ 0.08
PKNOX1-209ENST00000560448 POU5F1BQ06416 359 aa15.57■□□□□ 0.08
PKNOX1-209ENST00000560448 IKBKEQ14164 716 aa15.57■□□□□ 0.08
PKNOX1-209ENST00000560448 EMC2Q15006 297 aa15.57■□□□□ 0.08
PKNOX1-209ENST00000560448 STK38Q15208 465 aa15.57■□□□□ 0.08
PKNOX1-209ENST00000560448 PCBP1Q15365 356 aaKnown RBP eCLIP15.57■□□□□ 0.08
PKNOX1-209ENST00000560448 FBXO47Q5MNV8 452 aa15.57■□□□□ 0.08
PKNOX1-209ENST00000560448 PLA2G4FQ68DD2 849 aa15.57■□□□□ 0.08
PKNOX1-209ENST00000560448 ZNF365Q70YC5 407 aa15.57■□□□□ 0.08
PKNOX1-209ENST00000560448 DEFB128Q7Z7B8 93 aa15.57■□□□□ 0.08
PKNOX1-209ENST00000560448 PHOSPHO2Q8TCD6 241 aa15.57■□□□□ 0.08
PKNOX1-209ENST00000560448 PSPC1Q8WXF1 523 aaKnown RBP15.57■□□□□ 0.08
PKNOX1-209ENST00000560448 RNPC3Q96LT9 517 aaKnown RBP15.57■□□□□ 0.08
PKNOX1-209ENST00000560448 TIPINQ9BVW5 301 aa15.57■□□□□ 0.08
PKNOX1-209ENST00000560448 IFIH1Q9BYX4 1025 aaKnown RBP15.57■□□□□ 0.08
PKNOX1-209ENST00000560448 KIAA1024Q9UPX6 916 aa15.57■□□□□ 0.08
PKNOX1-209ENST00000560448 EVPLQ92817 2033 aa15.57■□□□□ 0.08
PKNOX1-209ENST00000560448 ARID2Q68CP9 1835 aa15.56■□□□□ 0.08
PKNOX1-209ENST00000560448 GPR182O15218 404 aa15.56■□□□□ 0.08
PKNOX1-209ENST00000560448 SPTLC2O15270 562 aa15.56■□□□□ 0.08
PKNOX1-209ENST00000560448 SLC34A2O95436 690 aa15.56■□□□□ 0.08
PKNOX1-209ENST00000560448 EYA4O95677 639 aa15.56■□□□□ 0.08
PKNOX1-209ENST00000560448 CLCN3P51790 818 aa15.56■□□□□ 0.08
PKNOX1-209ENST00000560448 EPHB4P54760 987 aa15.56■□□□□ 0.08
PKNOX1-209ENST00000560448 NPEPPSP55786 919 aa15.56■□□□□ 0.08
PKNOX1-209ENST00000560448 MBTPS1Q14703 1052 aa15.56■□□□□ 0.08
PKNOX1-209ENST00000560448 GPNMBQ14956 572 aa15.56■□□□□ 0.08
PKNOX1-209ENST00000560448 FAM173BQ6P4H8 233 aa15.56■□□□□ 0.08
PKNOX1-209ENST00000560448 POTEGQ6S5H5 508 aa15.56■□□□□ 0.08
PKNOX1-209ENST00000560448 C16orf59Q7L2K0 433 aa15.56■□□□□ 0.08
PKNOX1-209ENST00000560448 PIAS4Q8N2W9 510 aaPredicted RBP15.56■□□□□ 0.08
PKNOX1-209ENST00000560448 ZNF579Q8NAF0 562 aaKnown RBP15.56■□□□□ 0.08
PKNOX1-209ENST00000560448 MMTAG2Q9BU76 263 aaKnown RBP15.56■□□□□ 0.08
PKNOX1-209ENST00000560448 DDX19AQ9NUU7 478 aaKnown RBP15.56■□□□□ 0.08
PKNOX1-209ENST00000560448 RNF216Q9NWF9 866 aaPredicted RBP15.56■□□□□ 0.08
PKNOX1-209ENST00000560448 CCDC39Q9UFE4 941 aa15.56■□□□□ 0.08
PKNOX1-209ENST00000560448 KCNG1Q9UIX4 513 aa15.56■□□□□ 0.08
PKNOX1-209ENST00000560448 FBXO2Q9UK22 296 aaPredicted RBP15.56■□□□□ 0.08
PKNOX1-209ENST00000560448 ARHGEF35A5YM69 484 aa15.55■□□□□ 0.08
PKNOX1-209ENST00000560448 GOLGA6L22H0YM25 854 aa15.55■□□□□ 0.08
PKNOX1-209ENST00000560448 GPR32O75388 356 aa15.55■□□□□ 0.08
PKNOX1-209ENST00000560448 GPC3P51654 580 aa15.55■□□□□ 0.08
PKNOX1-209ENST00000560448 KRT85P78386 507 aa15.55■□□□□ 0.08
PKNOX1-209ENST00000560448 GSE1Q14687 1217 aa15.55■□□□□ 0.08
PKNOX1-209ENST00000560448 SHHQ15465 462 aa15.55■□□□□ 0.08
PKNOX1-209ENST00000560448 FOXD4L5Q5VV16 416 aaPredicted RBP15.55■□□□□ 0.08
PKNOX1-209ENST00000560448 PPP4R3CPQ6ZMV5 832 aa15.55■□□□□ 0.08
PKNOX1-209ENST00000560448 CABP7Q86V35 215 aa15.55■□□□□ 0.08
PKNOX1-209ENST00000560448 LRRC71Q8N4P6 559 aa15.55■□□□□ 0.08
PKNOX1-209ENST00000560448 PIGOQ8TEQ8 1089 aa15.55■□□□□ 0.08
PKNOX1-209ENST00000560448 FOXD4L4Q8WXT5 416 aaPredicted RBP15.55■□□□□ 0.08
PKNOX1-209ENST00000560448 VWCEQ96DN2 955 aa15.55■□□□□ 0.08
PKNOX1-209ENST00000560448 SLC9A7Q96T83 725 aa15.55■□□□□ 0.08
PKNOX1-209ENST00000560448 LMBRD1Q9NUN5 540 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms