RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 PHF20Q9BVI0 1012 aa15.85■□□□□ 0.13
TPM1-223ENST00000560445 OSBPL7Q9BZF2 842 aa15.85■□□□□ 0.13
TPM1-223ENST00000560445 RC3H2Q9HBD1 1191 aaKnown RBP15.85■□□□□ 0.13
TPM1-223ENST00000560445 ERVK-5Q9HDB9 667 aa15.85■□□□□ 0.13
TPM1-223ENST00000560445 VCANP13611 3396 aa15.84■□□□□ 0.13
TPM1-223ENST00000560445 LOXHD1Q8IVV2 1947 aa15.84■□□□□ 0.13
TPM1-223ENST00000560445 EVPLQ92817 2033 aa15.84■□□□□ 0.13
TPM1-223ENST00000560445 M0R2N6 131 aa15.84■□□□□ 0.13
TPM1-223ENST00000560445 PSMD10O75832 226 aa15.84■□□□□ 0.13
TPM1-223ENST00000560445 BAG4O95429 457 aaKnown RBP15.84■□□□□ 0.13
TPM1-223ENST00000560445 ZSCAN20P17040 1043 aaPredicted RBP15.84■□□□□ 0.13
TPM1-223ENST00000560445 TFF2Q03403 129 aa15.84■□□□□ 0.13
TPM1-223ENST00000560445 KIZQ2M2Z5 673 aa15.84■□□□□ 0.13
TPM1-223ENST00000560445 LETM2Q2VYF4 491 aa15.84■□□□□ 0.13
TPM1-223ENST00000560445 EFCAB12Q6NXP0 572 aa15.84■□□□□ 0.13
TPM1-223ENST00000560445 SPRED2Q7Z698 418 aa15.84■□□□□ 0.13
TPM1-223ENST00000560445 ZBTB10Q96DT7 871 aa15.84■□□□□ 0.13
TPM1-223ENST00000560445 INO80BQ9C086 356 aaPredicted RBP15.84■□□□□ 0.13
TPM1-223ENST00000560445 UNC45AQ9H3U1 944 aa15.84■□□□□ 0.13
TPM1-223ENST00000560445 ELAC1Q9H777 363 aaKnown RBP15.84■□□□□ 0.13
TPM1-223ENST00000560445 ATP6V0A4Q9HBG4 840 aa15.84■□□□□ 0.13
TPM1-223ENST00000560445 RGS18Q9NS28 235 aa15.84■□□□□ 0.13
TPM1-223ENST00000560445 ORC3Q9UBD5 711 aaPredicted RBP15.84■□□□□ 0.13
TPM1-223ENST00000560445 SEPT9Q9UHD8 586 aaPredicted RBP15.84■□□□□ 0.13
TPM1-223ENST00000560445 PCDHB12Q9Y5F1 795 aa15.84■□□□□ 0.13
TPM1-223ENST00000560445 WDR81Q562E7 1941 aa15.84■□□□□ 0.13
TPM1-223ENST00000560445 TDP2O95551 362 aa15.83■□□□□ 0.12
TPM1-223ENST00000560445 MMP1P03956 469 aa15.83■□□□□ 0.12
TPM1-223ENST00000560445 ATP4AP20648 1035 aa15.83■□□□□ 0.12
TPM1-223ENST00000560445 EIF4BP23588 611 aaKnown RBP15.83■□□□□ 0.12
TPM1-223ENST00000560445 PSMC5P62195 406 aa15.83■□□□□ 0.12
TPM1-223ENST00000560445 INF2Q27J81 1249 aa15.83■□□□□ 0.12
TPM1-223ENST00000560445 LEXMQ3ZCV2 418 aa15.83■□□□□ 0.12
TPM1-223ENST00000560445 SLFN12Q8IYM2 578 aa15.83■□□□□ 0.12
TPM1-223ENST00000560445 ABI1Q8IZP0 508 aa15.83■□□□□ 0.12
TPM1-223ENST00000560445 PABPC5Q96DU9 382 aaKnown RBP15.83■□□□□ 0.12
TPM1-223ENST00000560445 OSMRQ99650 979 aa15.83■□□□□ 0.12
TPM1-223ENST00000560445 ADAM2Q99965 735 aa15.83■□□□□ 0.12
TPM1-223ENST00000560445 NIFKQ9BYG3 293 aaKnown RBP15.83■□□□□ 0.12
TPM1-223ENST00000560445 TMEM161AQ9NX61 479 aa15.83■□□□□ 0.12
TPM1-223ENST00000560445 DACT1Q9NYF0 836 aa15.83■□□□□ 0.12
TPM1-223ENST00000560445 TPCN1Q9ULQ1 816 aa15.83■□□□□ 0.12
TPM1-223ENST00000560445 ST3GAL5Q9UNP4 418 aa15.83■□□□□ 0.12
TPM1-223ENST00000560445 NOC2LQ9Y3T9 749 aaKnown RBP15.83■□□□□ 0.12
TPM1-223ENST00000560445 BRWD1Q9NSI6 2320 aa15.83■□□□□ 0.12
TPM1-223ENST00000560445 BDP1A6H8Y1 2624 aa15.82■□□□□ 0.12
TPM1-223ENST00000560445 VTNP04004 478 aa15.82■□□□□ 0.12
TPM1-223ENST00000560445 KCNA5P22460 613 aa15.82■□□□□ 0.12
TPM1-223ENST00000560445 KRT2P35908 639 aa15.82■□□□□ 0.12
TPM1-223ENST00000560445 KCNQ1P51787 676 aa15.82■□□□□ 0.12
TPM1-223ENST00000560445 CLCN3P51790 818 aa15.82■□□□□ 0.12
TPM1-223ENST00000560445 AK2P54819 239 aa15.82■□□□□ 0.12
TPM1-223ENST00000560445 UBE3AQ05086 875 aa15.82■□□□□ 0.12
TPM1-223ENST00000560445 TMEM266Q2M3C6 531 aa15.82■□□□□ 0.12
TPM1-223ENST00000560445 SPOUT1Q5T280 376 aaKnown RBP15.82■□□□□ 0.12
TPM1-223ENST00000560445 TRMT1LQ7Z2T5 733 aaKnown RBP15.82■□□□□ 0.12
TPM1-223ENST00000560445 ETNPPLQ8TBG4 499 aa15.82■□□□□ 0.12
TPM1-223ENST00000560445 NLRP7Q8WX94 980 aa15.82■□□□□ 0.12
TPM1-223ENST00000560445 LINC01599Q8WXQ3 324 aa15.82■□□□□ 0.12
TPM1-223ENST00000560445 UIMC1Q96RL1 719 aa15.82■□□□□ 0.12
TPM1-223ENST00000560445 C1QTNF1Q9BXJ1 281 aa15.82■□□□□ 0.12
TPM1-223ENST00000560445 GCOM2Q9BZD3 368 aaPredicted RBP15.82■□□□□ 0.12
TPM1-223ENST00000560445 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.81■□□□□ 0.12
TPM1-223ENST00000560445 ADAMTS3O15072 1205 aa15.81■□□□□ 0.12
TPM1-223ENST00000560445 GAS2O43903 313 aaKnown RBP15.81■□□□□ 0.12
TPM1-223ENST00000560445 ZNF862O60290 1169 aa15.81■□□□□ 0.12
TPM1-223ENST00000560445 CCNT1O60563 726 aaKnown RBP15.81■□□□□ 0.12
TPM1-223ENST00000560445 GPR32O75388 356 aa15.81■□□□□ 0.12
TPM1-223ENST00000560445 SKIP12755 728 aa15.81■□□□□ 0.12
TPM1-223ENST00000560445 LAG3P18627 525 aa15.81■□□□□ 0.12
TPM1-223ENST00000560445 SFPQP23246 707 aaKnown RBP eCLIP15.81■□□□□ 0.12
TPM1-223ENST00000560445 QARSP47897 775 aaKnown RBP15.81■□□□□ 0.12
TPM1-223ENST00000560445 NLRP11P59045 1033 aaKnown RBP15.81■□□□□ 0.12
TPM1-223ENST00000560445 PPP2R5CQ13362 524 aa15.81■□□□□ 0.12
TPM1-223ENST00000560445 PDE12Q6L8Q7 609 aaKnown RBP15.81■□□□□ 0.12
TPM1-223ENST00000560445 ZNF410Q86VK4 478 aa15.81■□□□□ 0.12
TPM1-223ENST00000560445 CRIPAKQ8N1N5 446 aa15.81■□□□□ 0.12
TPM1-223ENST00000560445 SLC7A3Q8WY07 619 aa15.81■□□□□ 0.12
TPM1-223ENST00000560445 GTF3C6Q969F1 213 aa15.81■□□□□ 0.12
TPM1-223ENST00000560445 LARP6Q9BRS8 491 aaKnown RBP15.81■□□□□ 0.12
TPM1-223ENST00000560445 TMX1Q9H3N1 280 aa15.81■□□□□ 0.12
TPM1-223ENST00000560445 KCNJ14Q9UNX9 436 aa15.81■□□□□ 0.12
TPM1-223ENST00000560445 MRPL42Q9Y6G3 142 aaKnown RBP15.81■□□□□ 0.12
TPM1-223ENST00000560445 C9IYK1 514 aa15.8■□□□□ 0.12
TPM1-223ENST00000560445 PPM1AP35813 382 aa15.8■□□□□ 0.12
TPM1-223ENST00000560445 NEK4P51957 841 aa15.8■□□□□ 0.12
TPM1-223ENST00000560445 SAFBQ15424 915 aaKnown RBP eCLIP15.8■□□□□ 0.12
TPM1-223ENST00000560445 TARBP2Q15633 366 aaKnown RBP15.8■□□□□ 0.12
TPM1-223ENST00000560445 NPY5RQ15761 445 aa15.8■□□□□ 0.12
TPM1-223ENST00000560445 MTERF2Q49AM1 385 aa15.8■□□□□ 0.12
TPM1-223ENST00000560445 TCEAL5Q5H9L2 206 aa15.8■□□□□ 0.12
TPM1-223ENST00000560445 PIK3AP1Q6ZUJ8 805 aa15.8■□□□□ 0.12
TPM1-223ENST00000560445 OTUD6AQ7L8S5 288 aa15.8■□□□□ 0.12
TPM1-223ENST00000560445 RTN4RL1Q86UN2 441 aaPredicted RBP15.8■□□□□ 0.12
TPM1-223ENST00000560445 FAM228AQ86W67 206 aa15.8■□□□□ 0.12
TPM1-223ENST00000560445 LINC01465Q8N7H1 131 aa15.8■□□□□ 0.12
TPM1-223ENST00000560445 CHST12Q9NRB3 414 aa15.8■□□□□ 0.12
TPM1-223ENST00000560445 TBKBP1A7MCY6 615 aa15.79■□□□□ 0.12
TPM1-223ENST00000560445 DDX11L8A8MPP1 907 aa15.79■□□□□ 0.12
TPM1-223ENST00000560445 EOMESO95936 686 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms