RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 AGBL2Q5U5Z8 902 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 CYB5D1Q6P9G0 228 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 APOA5Q6Q788 366 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 ARHGAP27Q6ZUM4 889 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 ANKS3Q6ZW76 656 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 IFT20Q8IY31 132 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 FUKQ8N0W3 1084 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 IQCKQ8N0W5 287 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 RIN2Q8WYP3 895 aaPredicted RBP6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 ANAPC16Q96DE5 110 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 ABHD17AQ96GS6 310 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 ATP6V1G3Q96LB4 118 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 ZIM3Q96PE6 472 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 PSMD1Q99460 953 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 SH3GL3Q99963 347 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 SLF1Q9BQI6 1058 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 THAP9Q9H5L6 903 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 GDF3Q9NR23 364 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 STRN4Q9NRL3 753 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 SALL4Q9UJQ4 1053 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 ATXN7L1Q9ULK2 861 aaPredicted RBP6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 PPM1HQ9ULR3 514 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 GUCA1BQ9UMX6 200 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 LUC7L2Q9Y383 392 aaKnown RBP6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 TBX22Q9Y458 520 aa6.56□□□□□ -1.36
SNRPA1-209ENST00000560307 A0A0U1RQJ8 604 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 GRID2IPA4D2P6 1211 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 CFAP73A6NFT4 308 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 CCDC85CA6NKD9 419 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 SPDYE3A6NKU9 549 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 GOLGA8AA7E2F4 631 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 M0R2C6 588 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 CES2O00748 559 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 ATXN7O15265 892 aaPredicted RBP6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 FOXN1O15353 648 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 ZBTB43O43298 467 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 DEXIO95424 95 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 LCA5LO95447 670 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 PF4P02776 101 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 MYL1P05976 194 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 MYBL2P10244 700 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 IDEP14735 1019 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 ELNP15502 786 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 HNRNPH3P31942 346 aaKnown RBP6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 ETFBP38117 255 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 PAFAH1B1P43034 410 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 SSR1P43307 286 aaKnown RBP6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 DNM2P50570 870 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 CLNS1AP54105 237 aaKnown RBP6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 CASP7P55210 303 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 ZBED6P86452 979 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 KIF5AQ12840 1032 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 HYAL2Q12891 473 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 ALX1Q15699 326 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 CCDC38Q502W7 563 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 ANKRD20A8PQ5CZ79 823 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 C1orf141Q5JVX7 400 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 SPDYCQ5MJ68 293 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 ZNF658Q5TYW1 1059 aaPredicted RBP6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 C8orf74Q6P047 294 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 ZNF530Q6P9A1 599 aaPredicted RBP6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 TMED8Q6PL24 325 aaPredicted RBP6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 RAB44Q7Z6P3 723 aaPredicted RBP6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 JAZF1Q86VZ6 243 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 CREG2Q8IUH2 290 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 MB21D1Q8N884 522 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 GOLM1Q8NBJ4 401 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 ASAP3Q8TDY4 903 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 ATRIPQ8WXE1 791 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 CCDC47Q96A33 483 aaKnown RBP6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 PAGE5Q96GU1 130 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 SPACA7Q96KW9 195 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 CCDC114Q96M63 670 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 NSUN5Q96P11 429 aaKnown RBP6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 ALS2CR12Q96Q35 445 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 SRPK1Q96SB4 655 aaKnown RBP6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 CCT8L2Q96SF2 557 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 ZKSCAN3Q9BRR0 538 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 GSX2Q9BZM3 304 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 EBF2Q9HAK2 575 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 CD248Q9HCU0 757 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 C11orf16Q9NQ32 467 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 SPATS2LQ9NUQ6 558 aaKnown RBP6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 UBP1Q9NZI7 540 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 DDX20Q9UHI6 824 aaKnown RBP6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 SAMM50Q9Y512 469 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 MRPL42Q9Y6G3 142 aaKnown RBP6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 GLI3P10071 1580 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 TNRQ92752 1358 aa6.55□□□□□ -1.36
SNRPA1-209ENST00000560307 GMNCA6NCL1 334 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 METTL12A8MUP2 240 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 KCNJ18B7U540 433 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 ABLIM1O14639 778 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 FOXP2O15409 715 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 PJA2O43164 708 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 KCNQ3O43525 872 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 NEBLO76041 1014 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 FGAP02671 866 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 SRGNP10124 158 aa6.54□□□□□ -1.36
SNRPA1-209ENST00000560307 ARAFP10398 606 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms