RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 FLRT1Q9NZU1 646 aa7.14□□□□□ -1.27
SPG11-221ENST00000560299 MAN1B1Q9UKM7 699 aa7.14□□□□□ -1.27
SPG11-221ENST00000560299 ZNF215Q9UL58 517 aaPredicted RBP7.14□□□□□ -1.27
SPG11-221ENST00000560299 ODF2LQ9ULJ1 636 aa7.14□□□□□ -1.27
SPG11-221ENST00000560299 MAFBQ9Y5Q3 323 aaPredicted RBP7.14□□□□□ -1.27
SPG11-221ENST00000560299 DOCK5Q9H7D0 1870 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 LRRC37A2A6NM11 1700 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 EMSYQ7Z589 1322 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 GSTTP1A0A1W2PQM5 241 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 PSMA7O14818 248 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 DYNC1LI2O43237 492 aaPredicted RBP7.13□□□□□ -1.27
SPG11-221ENST00000560299 SORBS3O60504 671 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 KPNA6O60684 536 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 DGAT1O75907 488 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 FAM13AO94988 1023 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 ARIH2O95376 493 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 OATP04181 439 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 ELNP15502 786 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 GUCY2CP25092 1073 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 ERCC5P28715 1186 aaPredicted RBP7.13□□□□□ -1.27
SPG11-221ENST00000560299 CYP2C19P33261 490 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 RARRES1P49788 294 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 CPT1AP50416 773 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 PRKCEQ02156 737 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 SNX17Q15036 470 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 HSDL1Q3SXM5 330 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 KMT5BQ4FZB7 885 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 HERC4Q5GLZ8 1057 aaPredicted RBP7.13□□□□□ -1.27
SPG11-221ENST00000560299 UTP14CQ5TAP6 766 aaKnown RBP7.13□□□□□ -1.27
SPG11-221ENST00000560299 ISM2Q6H9L7 571 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 RINT1Q6NUQ1 792 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 PADI6Q6TGC4 694 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 C1orf186Q6ZWK4 172 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 CCDC60Q8IWA6 550 aaPredicted RBP7.13□□□□□ -1.27
SPG11-221ENST00000560299 SLC17A8Q8NDX2 589 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 MCPH1Q8NEM0 835 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 BBXQ8WY36 941 aaPredicted RBP7.13□□□□□ -1.27
SPG11-221ENST00000560299 DRC1Q96MC2 740 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 BPIFA3Q9BQP9 254 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 JPH2Q9BR39 696 aaPredicted RBP7.13□□□□□ -1.27
SPG11-221ENST00000560299 UNC93B1Q9H1C4 597 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 DNAJC25Q9H1X3 360 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 ZHX3Q9H4I2 956 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 ERAP1Q9NZ08 941 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 LARSQ9P2J5 1176 aaKnown RBP7.13□□□□□ -1.27
SPG11-221ENST00000560299 SEL1LQ9UBV2 794 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 SEPT9Q9UHD8 586 aaPredicted RBP7.13□□□□□ -1.27
SPG11-221ENST00000560299 WDR81Q562E7 1941 aa7.13□□□□□ -1.27
SPG11-221ENST00000560299 IGSF9BQ9UPX0 1349 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 A0A087WWV3 80 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 BICDL2A1A5D9 508 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 MOXD2PA6NHM9 499 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 CCDC85CA6NKD9 419 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 GAS2O43903 313 aaKnown RBP7.12□□□□□ -1.27
SPG11-221ENST00000560299 KLRC4O43908 158 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 ZEB2O60315 1214 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 HBP1O60381 514 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 LGR5O75473 907 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 CABYRO75952 493 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 RARBP10826 455 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 SMPD1P17405 629 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 SCP2P22307 547 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 CASP1P29466 404 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 CNGA1P29973 690 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 ABCD1P33897 745 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 RFC5P40937 340 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 SMTNP53814 917 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 GJA9P57773 515 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 ARHGAP1Q07960 439 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 GIT2Q14161 759 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 MTFR1Q15390 333 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 CCL14Q16627 93 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 UGCGQ16739 394 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 TPD52L1Q16890 204 aaPredicted RBP7.12□□□□□ -1.27
SPG11-221ENST00000560299 DPCR1Q3MIW9 517 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 COBLL1Q53SF7 1204 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 ARSHQ5FYA8 562 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 FAM26FQ5R3K3 315 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 PRAMEF19Q5SWL8 479 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 CCSAPQ6IQ19 270 aaPredicted RBP7.12□□□□□ -1.27
SPG11-221ENST00000560299 ANO5Q75V66 913 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 TRMT1LQ7Z2T5 733 aaKnown RBP7.12□□□□□ -1.27
SPG11-221ENST00000560299 NECAB2Q7Z6G3 386 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 TLK2Q86UE8 772 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 GAS2L3Q86XJ1 694 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 MYCT1Q8N699 235 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 RNF214Q8ND24 703 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 KLHDC9Q8NEP7 349 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 LRRC15Q8TF66 581 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 AFG1LQ8WV93 481 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 SLC7A3Q8WY07 619 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 KIFAP3Q92845 792 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 COPS5Q92905 334 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 DNAJC19Q96DA6 116 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 DHTKD1Q96HY7 919 aaPredicted RBP7.12□□□□□ -1.27
SPG11-221ENST00000560299 NIFKQ9BYG3 293 aaKnown RBP7.12□□□□□ -1.27
SPG11-221ENST00000560299 BCAS3Q9H6U6 928 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 C17orf75Q9HAS0 396 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 GRPEL1Q9HAV7 217 aa7.12□□□□□ -1.27
SPG11-221ENST00000560299 PARVGQ9HBI0 331 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms