RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 AMNQ9BXJ7 453 aa5.34□□□□□ -1.55
LRRC28-218ENST00000560236 KRTAP9-8Q9BYQ0 159 aa5.34□□□□□ -1.55
LRRC28-218ENST00000560236 OR10A5Q9H207 317 aa5.34□□□□□ -1.55
LRRC28-218ENST00000560236 SMURF1Q9HCE7 757 aa5.34□□□□□ -1.55
LRRC28-218ENST00000560236 AURKAIP1Q9NWT8 199 aaPredicted RBP5.34□□□□□ -1.55
LRRC28-218ENST00000560236 UCKL1Q9NWZ5 548 aa5.34□□□□□ -1.55
LRRC28-218ENST00000560236 Q9UFV3 132 aa5.34□□□□□ -1.55
LRRC28-218ENST00000560236 FAM184BQ9ULE4 1060 aa5.34□□□□□ -1.55
LRRC28-218ENST00000560236 PCDHA9Q9Y5H5 950 aa5.34□□□□□ -1.55
LRRC28-218ENST00000560236 PDPK1O15530 556 aa5.33□□□□□ -1.56
LRRC28-218ENST00000560236 C6orf222P0C671 652 aaPredicted RBP5.33□□□□□ -1.56
LRRC28-218ENST00000560236 INHBCP55103 352 aa5.33□□□□□ -1.56
LRRC28-218ENST00000560236 GABREP78334 506 aa5.33□□□□□ -1.56
LRRC28-218ENST00000560236 SSRP1Q08945 709 aaKnown RBP5.33□□□□□ -1.56
LRRC28-218ENST00000560236 TUBA3CQ13748 450 aa5.33□□□□□ -1.56
LRRC28-218ENST00000560236 SEC23AQ15436 765 aa5.33□□□□□ -1.56
LRRC28-218ENST00000560236 MTERF2Q49AM1 385 aa5.33□□□□□ -1.56
LRRC28-218ENST00000560236 KANK2Q63ZY3 851 aa5.33□□□□□ -1.56
LRRC28-218ENST00000560236 TUBA3EQ6PEY2 450 aa5.33□□□□□ -1.56
LRRC28-218ENST00000560236 LRSAM1Q6UWE0 723 aa5.33□□□□□ -1.56
LRRC28-218ENST00000560236 ADGRE4PQ86SQ3 457 aa5.33□□□□□ -1.56
LRRC28-218ENST00000560236 ZC3H7AQ8IWR0 971 aaKnown RBP5.33□□□□□ -1.56
LRRC28-218ENST00000560236 GPR135Q8IZ08 494 aa5.33□□□□□ -1.56
LRRC28-218ENST00000560236 ZBTB38Q8NAP3 1195 aaPredicted RBP5.33□□□□□ -1.56
LRRC28-218ENST00000560236 PFDN2Q9UHV9 154 aa5.33□□□□□ -1.56
LRRC28-218ENST00000560236 SLC26A4O43511 780 aa5.32□□□□□ -1.56
LRRC28-218ENST00000560236 ADH4P08319 380 aa5.32□□□□□ -1.56
LRRC28-218ENST00000560236 MMEP08473 750 aa5.32□□□□□ -1.56
LRRC28-218ENST00000560236 LACTBP83111 547 aaPredicted RBP5.32□□□□□ -1.56
LRRC28-218ENST00000560236 HGFACQ04756 655 aa5.32□□□□□ -1.56
LRRC28-218ENST00000560236 MOGSQ13724 837 aa5.32□□□□□ -1.56
LRRC28-218ENST00000560236 FOXB2Q5VYV0 432 aa5.32□□□□□ -1.56
LRRC28-218ENST00000560236 TMEM200BQ69YZ2 307 aa5.32□□□□□ -1.56
LRRC28-218ENST00000560236 CKAP2LQ8IYA6 745 aa5.32□□□□□ -1.56
LRRC28-218ENST00000560236 D2HGDHQ8N465 521 aa5.32□□□□□ -1.56
LRRC28-218ENST00000560236 TMEM176AQ96HP8 235 aa5.32□□□□□ -1.56
LRRC28-218ENST00000560236 GIT1Q9Y2X7 761 aa5.32□□□□□ -1.56
LRRC28-218ENST00000560236 MSRB2Q9Y3D2 182 aa5.32□□□□□ -1.56
LRRC28-218ENST00000560236 PPRC1Q5VV67 1664 aaKnown RBP5.31□□□□□ -1.56
LRRC28-218ENST00000560236 SPATA31D1Q6ZQQ2 1576 aa5.31□□□□□ -1.56
LRRC28-218ENST00000560236 A0A087X1B8 175 aa5.31□□□□□ -1.56
LRRC28-218ENST00000560236 SCDO00767 359 aa5.31□□□□□ -1.56
LRRC28-218ENST00000560236 STK10O94804 968 aaKnown RBP5.31□□□□□ -1.56
LRRC28-218ENST00000560236 CRTAMO95727 393 aa5.31□□□□□ -1.56
LRRC28-218ENST00000560236 MAKP20794 623 aa5.31□□□□□ -1.56
LRRC28-218ENST00000560236 STAT5BP51692 787 aa5.31□□□□□ -1.56
LRRC28-218ENST00000560236 RASGRF1Q13972 1273 aa5.31□□□□□ -1.56
LRRC28-218ENST00000560236 FNDC7Q5VTL7 733 aa5.31□□□□□ -1.56
LRRC28-218ENST00000560236 GRAMD4Q6IC98 578 aa5.31□□□□□ -1.56
LRRC28-218ENST00000560236 HIPK4Q8NE63 616 aa5.31□□□□□ -1.56
LRRC28-218ENST00000560236 SHCBP1Q8NEM2 672 aa5.31□□□□□ -1.56
LRRC28-218ENST00000560236 ZNF483Q8TF39 744 aaPredicted RBP5.31□□□□□ -1.56
LRRC28-218ENST00000560236 ASB15Q8WXK1 588 aa5.31□□□□□ -1.56
LRRC28-218ENST00000560236 ZNF703Q9H7S9 590 aaPredicted RBP5.31□□□□□ -1.56
LRRC28-218ENST00000560236 MMRN2Q9H8L6 949 aa5.31□□□□□ -1.56
LRRC28-218ENST00000560236 GRIN2AQ12879 1464 aa5.31□□□□□ -1.56
LRRC28-218ENST00000560236 NUP160Q12769 1436 aa5.31□□□□□ -1.56
LRRC28-218ENST00000560236 GLI2P10070 1586 aa5.3□□□□□ -1.56
LRRC28-218ENST00000560236 CCDC85CA6NKD9 419 aa5.3□□□□□ -1.56
LRRC28-218ENST00000560236 CAPN14A8MX76 684 aa5.3□□□□□ -1.56
LRRC28-218ENST00000560236 CYP27B1O15528 508 aa5.3□□□□□ -1.56
LRRC28-218ENST00000560236 APPP05067 770 aa5.3□□□□□ -1.56
LRRC28-218ENST00000560236 THEMISQ8N1K5 641 aaPredicted RBP5.3□□□□□ -1.56
LRRC28-218ENST00000560236 CISD2Q8N5K1 135 aaKnown RBP5.3□□□□□ -1.56
LRRC28-218ENST00000560236 EXOC2Q96KP1 924 aa5.3□□□□□ -1.56
LRRC28-218ENST00000560236 GBP4Q96PP9 640 aa5.3□□□□□ -1.56
LRRC28-218ENST00000560236 KCNH7Q9NS40 1196 aa5.3□□□□□ -1.56
LRRC28-218ENST00000560236 PARPBPQ9NWS1 579 aa5.3□□□□□ -1.56
LRRC28-218ENST00000560236 REXO2Q9Y3B8 237 aaKnown RBP5.3□□□□□ -1.56
LRRC28-218ENST00000560236 CCDC88BA6NC98 1476 aa5.3□□□□□ -1.56
LRRC28-218ENST00000560236 FGD5Q6ZNL6 1462 aa5.3□□□□□ -1.56
LRRC28-218ENST00000560236 ABCA5Q8WWZ7 1642 aa5.3□□□□□ -1.56
LRRC28-218ENST00000560236 PRAMEF22A3QJZ6 481 aa5.29□□□□□ -1.56
LRRC28-218ENST00000560236 PMS2P1A4D2B8 440 aa5.29□□□□□ -1.56
LRRC28-218ENST00000560236 FOXP2O15409 715 aa5.29□□□□□ -1.56
LRRC28-218ENST00000560236 CRHR2Q13324 411 aa5.29□□□□□ -1.56
LRRC28-218ENST00000560236 CALML6Q8TD86 181 aa5.29□□□□□ -1.56
LRRC28-218ENST00000560236 LARP4BQ92615 738 aaKnown RBP5.29□□□□□ -1.56
LRRC28-218ENST00000560236 DHRS4Q9BTZ2 278 aa5.29□□□□□ -1.56
LRRC28-218ENST00000560236 AGO3Q9H9G7 860 aaKnown RBP5.29□□□□□ -1.56
LRRC28-218ENST00000560236 CEP72Q9P209 647 aa5.29□□□□□ -1.56
LRRC28-218ENST00000560236 ADCY10Q96PN6 1610 aa5.29□□□□□ -1.56
LRRC28-218ENST00000560236 KRTAP23-1A1A580 65 aa5.28□□□□□ -1.56
LRRC28-218ENST00000560236 DIAPH1O60610 1272 aaKnown RBP5.28□□□□□ -1.56
LRRC28-218ENST00000560236 FAM153BP0C7A2 387 aa5.28□□□□□ -1.56
LRRC28-218ENST00000560236 KRTAP1-1Q07627 177 aa5.28□□□□□ -1.56
LRRC28-218ENST00000560236 MAP3K12Q12852 859 aa5.28□□□□□ -1.56
LRRC28-218ENST00000560236 RIN1Q13671 783 aa5.28□□□□□ -1.56
LRRC28-218ENST00000560236 TM4SF20Q53R12 229 aa5.28□□□□□ -1.56
LRRC28-218ENST00000560236 SPTY2D1Q68D10 685 aaPredicted RBP5.28□□□□□ -1.56
LRRC28-218ENST00000560236 LDLRAD3Q86YD5 345 aa5.28□□□□□ -1.56
LRRC28-218ENST00000560236 TMPRSS6Q8IU80 811 aa5.28□□□□□ -1.56
LRRC28-218ENST00000560236 NOSTRINQ8IVI9 506 aa5.28□□□□□ -1.56
LRRC28-218ENST00000560236 CCDC113Q9H0I3 377 aa5.28□□□□□ -1.56
LRRC28-218ENST00000560236 HECAQ9UBI9 543 aaPredicted RBP5.28□□□□□ -1.56
LRRC28-218ENST00000560236 PPP1R1BQ9UD71 204 aaPredicted RBP5.28□□□□□ -1.56
LRRC28-218ENST00000560236 MRPS23Q9Y3D9 190 aaKnown RBP5.28□□□□□ -1.56
LRRC28-218ENST00000560236 ASB1Q9Y576 335 aa5.28□□□□□ -1.56
LRRC28-218ENST00000560236 A0A1W2PRX2 142 aa5.27□□□□□ -1.57
LRRC28-218ENST00000560236 APEX1P27695 318 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms