RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 PRPF18Q99633 342 aaKnown RBP14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 KLHL8Q9P2G9 620 aaPredicted RBP14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 FRMPD2Q68DX3 1309 aaPredicted RBP14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 M0R2C6 588 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 DLGAP3O95886 979 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 CASP8Q14790 479 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 ARHGEF6Q15052 776 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 FAM26FQ5R3K3 315 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 UBE2TQ9NPD8 197 aaPredicted RBP14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 LRRN2O75325 713 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 PSMA2P25787 234 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 ADCK5Q3MIX3 580 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 DAB2IPQ5VWQ8 1189 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 KLHL24Q6TFL4 600 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 C7orf31Q8N865 590 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 RMDN1Q96DB5 314 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 KRCC1Q9NPI7 259 aaPredicted RBP14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 LMBRD1Q9NUN5 540 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 PRKAG2Q9UGJ0 569 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 ARL2BPQ9Y2Y0 163 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 PDE8AO60658 829 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 NPM3O75607 178 aaKnown RBP14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 CENPAP49450 140 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 RBL2Q08999 1139 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 SLC44A4Q53GD3 710 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 EFHBQ8N7U6 833 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 TBC1D22AQ8WUA7 517 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 FAM129AQ9BZQ8 928 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 PCDHA5Q9Y5H7 936 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 MAP3K5Q99683 1374 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 SERPINB4P48594 390 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 MYL10Q9BUA6 226 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 PDCD10Q9BUL8 212 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 UBAP1Q9NZ09 502 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 CMA1P23946 247 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 NR2F2P24468 414 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 SLC39A6Q13433 755 aa14.75□□□□□ -0.05
CSPG4P12-202ENST00000559989 TNFAIP1Q13829 316 aa14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 DDB1Q16531 1140 aa14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 POTEEQ6S8J3 1075 aa14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 THOC1Q96FV9 657 aaKnown RBP14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 HEXIM2Q96MH2 286 aaKnown RBP14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 RNPEPQ9H4A4 650 aa14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 ZNF189O75820 626 aaPredicted RBP14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 MAN2A1Q16706 1144 aa14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 DPP8Q6V1X1 898 aaPredicted RBP14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 TTC13Q8NBP0 860 aa14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 TGS1Q96RS0 853 aaKnown RBP14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 FARP1Q9Y4F1 1045 aaPredicted RBP14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 KLHL18O94889 574 aa14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 OR6B2Q6IFH4 312 aa14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 ZSCAN10Q96SZ4 725 aaPredicted RBP14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 NHEJ1Q9H9Q4 299 aaPredicted RBP14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 SARS2Q9NP81 518 aaKnown RBP14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 LRRIQ3A6PVS8 624 aaPredicted RBP14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 ANGPT2O15123 496 aa14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 S100A9P06702 114 aaKnown RBP14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 NCALDP61601 193 aa14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 GJA10Q969M2 543 aa14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 CMTM5Q96DZ9 223 aa14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 AIPL1Q9NZN9 384 aa14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 GMNCA6NCL1 334 aa14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 H0YIN7 160 aa14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 ZNF274Q96GC6 653 aaPredicted RBP14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 AP5M1Q9H0R1 490 aa14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 SLFN12LQ6IEE8 588 aa14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 SLC30A9Q6PML9 568 aa14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 THEM5Q8N1Q8 247 aa14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 SPATA5Q8NB90 893 aa14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 DSCC1Q9BVC3 393 aa14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 BBS2Q9BXC9 721 aa14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 ZWILCHQ9H900 591 aa14.74□□□□□ -0.05
CSPG4P12-202ENST00000559989 STK25O00506 426 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 ALAS1P13196 640 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 POU5F1BQ06416 359 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 INAQ16352 499 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 TEX2Q8IWB9 1127 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 DDI1Q8WTU0 396 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 BATF3Q9NR55 127 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 ADAM30Q9UKF2 790 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 GSPT1P15170 499 aaKnown RBP14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 NNMTP40261 264 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 TSC22D1Q15714 1073 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 TERB1Q8NA31 727 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 VPS11Q9H270 941 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 CYP4F11Q9HBI6 524 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 CFAP69A5D8W1 941 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 MYO1CO00159 1063 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 NEMP1O14524 444 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 BNIP3LO60238 219 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 ARFIP2P53365 341 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 LRRC49Q8IUZ0 686 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 ZNF654Q8IZM8 581 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 SYMPKQ92797 1274 aaKnown RBP14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 AK8Q96MA6 479 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 PIGUQ9H490 435 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 MAD2L2Q9UI95 211 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 RUSC2Q8N2Y8 1516 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 TIAM1Q13009 1591 aa14.73□□□□□ -0.05
CSPG4P12-202ENST00000559989 TSPY1Q01534 308 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms