RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 LACTBP83111 547 aaPredicted RBP5.9□□□□□ -1.46
SPG11-220ENST00000559933 ATP2C1P98194 919 aaPredicted RBP5.9□□□□□ -1.46
SPG11-220ENST00000559933 SP4Q02446 784 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 PRKCZQ05513 592 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 ITGB3BPQ13352 177 aaPredicted RBP5.9□□□□□ -1.46
SPG11-220ENST00000559933 GRB14Q14449 540 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 KCTD2Q14681 263 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 CALCRLQ16602 461 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 ZNF792Q3KQV3 632 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 GJC2Q5T442 439 aaPredicted RBP5.9□□□□□ -1.46
SPG11-220ENST00000559933 CLEC17AQ6ZS10 378 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 PLA2G4DQ86XP0 818 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 CCAR1Q8IX12 1150 aaKnown RBP5.9□□□□□ -1.46
SPG11-220ENST00000559933 SHCBP1Q8NEM2 672 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 ETNPPLQ8TBG4 499 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 GPT2Q8TD30 523 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 HAS1Q92839 578 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 COPS5Q92905 334 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 CSRNP2Q9H175 543 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 MROH8Q9H579 483 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 ZCCHC17Q9NP64 241 aaKnown RBP5.9□□□□□ -1.46
SPG11-220ENST00000559933 PDGFCQ9NRA1 345 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 LMBRD1Q9NUN5 540 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 FBXO40Q9UH90 709 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 DDX25Q9UHL0 483 aaKnown RBP5.9□□□□□ -1.46
SPG11-220ENST00000559933 PCDHA7Q9UN72 937 aa5.9□□□□□ -1.46
SPG11-220ENST00000559933 KIAA1217Q5T5P2 1943 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 A0A087WWV3 80 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 A0A087X0B3 334 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.89□□□□□ -1.47
SPG11-220ENST00000559933 SLC15A5A6NIM6 579 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 TNPO2O14787 897 aaKnown RBP5.89□□□□□ -1.47
SPG11-220ENST00000559933 MSTNO14793 375 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 ADCY6O43306 1168 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 CHMP2AO43633 222 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 ATP9AO75110 1047 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 YEATS4O95619 227 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 LIG1P18858 919 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 RFX1P22670 979 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 EDNRBP24530 442 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 MAPK4P31152 587 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 CYP2C19P33261 490 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 MAP2K2P36507 400 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 ZNF76P36508 570 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 TECP42680 631 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 TXKP42681 527 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 SP2Q02086 613 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 DPYDQ12882 1025 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 TRAF1Q13077 416 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 GRIN2CQ14957 1233 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 SLC39A14Q15043 492 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 PRAMEF19Q5SWL8 479 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 AXDND1Q5T1B0 1012 aaPredicted RBP5.89□□□□□ -1.47
SPG11-220ENST00000559933 PCNX4Q63HM2 1172 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 SHC4Q6S5L8 630 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 SEPT14Q6ZU15 432 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 CHSY3Q70JA7 882 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 ARMCX2Q7L311 632 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 SYT9Q86SS6 491 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 ANKMY2Q8IV38 441 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 ALDH16A1Q8IZ83 802 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 FAM177A1Q8N128 213 aaPredicted RBP5.89□□□□□ -1.47
SPG11-220ENST00000559933 DNAJC5GQ8N7S2 189 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 TMEM87AQ8NBN3 555 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 RGS22Q8NE09 1264 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 NSUN6Q8TEA1 469 aaKnown RBP5.89□□□□□ -1.47
SPG11-220ENST00000559933 LRRC15Q8TF66 581 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 ZNF296Q8WUU4 475 aaPredicted RBP5.89□□□□□ -1.47
SPG11-220ENST00000559933 TRIB2Q92519 343 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 VTI1AQ96AJ9 217 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 MAML3Q96JK9 1138 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 MBOAT7Q96N66 472 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 GBP4Q96PP9 640 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 PLIN2Q99541 437 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 MXRA8Q9BRK3 442 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 GLT8D2Q9H1C3 349 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 BRD7Q9NPI1 651 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 RCOR1Q9UKL0 485 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 ATP6V1DQ9Y5K8 247 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 UBIAD1Q9Y5Z9 338 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 IVNS1ABPQ9Y6Y0 642 aa5.89□□□□□ -1.47
SPG11-220ENST00000559933 ELOA3CA0A087WX78 387 aaPredicted RBP5.88□□□□□ -1.47
SPG11-220ENST00000559933 A0A1B0GVL5 298 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 ELOA3DA6NLF2 546 aaPredicted RBP5.88□□□□□ -1.47
SPG11-220ENST00000559933 SNAI1O95863 264 aaPredicted RBP5.88□□□□□ -1.47
SPG11-220ENST00000559933 FOSP01100 380 aaPredicted RBP5.88□□□□□ -1.47
SPG11-220ENST00000559933 CYP3A4P08684 503 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 ELNP15502 786 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 UBA1P22314 1058 aaKnown RBP5.88□□□□□ -1.47
SPG11-220ENST00000559933 CCND2P30279 289 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 CIITAP33076 1130 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 COPB2P35606 906 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 TRAPPC10P48553 1259 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 FCGRTP55899 365 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 SP3Q02447 781 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 PTK7Q13308 1070 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 MTMR1Q13613 665 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 ZRSR1Q15695 479 aaKnown RBP5.88□□□□□ -1.47
SPG11-220ENST00000559933 ECM1Q16610 540 aa5.88□□□□□ -1.47
SPG11-220ENST00000559933 LY6KQ17RY6 165 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms