RNA–Protein interactions for RNA: ENST00000559866.1

AC243562.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC243562.3, Length 1,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243562.3-201ENST00000559866 YTHDC1Q96MU7 727 aaKnown RBP17.82■□□□□ 0.44
AC243562.3-201ENST00000559866 MAP3K14Q99558 947 aa17.82■□□□□ 0.44
AC243562.3-201ENST00000559866 ATP6V0A4Q9HBG4 840 aa17.82■□□□□ 0.44
AC243562.3-201ENST00000559866 NR2E1Q9Y466 385 aa17.82■□□□□ 0.44
AC243562.3-201ENST00000559866 SPDYE3A6NKU9 549 aa17.81■□□□□ 0.44
AC243562.3-201ENST00000559866 VTNP04004 478 aa17.81■□□□□ 0.44
AC243562.3-201ENST00000559866 HOXB8P17481 243 aaPredicted RBP17.81■□□□□ 0.44
AC243562.3-201ENST00000559866 CLLU1OSQ5K130 101 aa17.81■□□□□ 0.44
AC243562.3-201ENST00000559866 ASTLQ6HA08 431 aaPredicted RBP17.81■□□□□ 0.44
AC243562.3-201ENST00000559866 TYW1BQ6NUM6 668 aa17.81■□□□□ 0.44
AC243562.3-201ENST00000559866 CASP10Q92851 521 aa17.81■□□□□ 0.44
AC243562.3-201ENST00000559866 ADAM7Q9H2U9 754 aa17.81■□□□□ 0.44
AC243562.3-201ENST00000559866 AGO4Q9HCK5 861 aaKnown RBP17.81■□□□□ 0.44
AC243562.3-201ENST00000559866 MYH9P35579 1960 aaKnown RBP17.8■□□□□ 0.44
AC243562.3-201ENST00000559866 C2orf71A6NGG8 1288 aa17.8■□□□□ 0.44
AC243562.3-201ENST00000559866 MAFGO15525 162 aa17.8■□□□□ 0.44
AC243562.3-201ENST00000559866 PI15O43692 258 aa17.8■□□□□ 0.44
AC243562.3-201ENST00000559866 CLASP2O75122 1294 aaKnown RBP17.8■□□□□ 0.44
AC243562.3-201ENST00000559866 GPR32O75388 356 aa17.8■□□□□ 0.44
AC243562.3-201ENST00000559866 C22orf31O95567 290 aa17.8■□□□□ 0.44
AC243562.3-201ENST00000559866 SMARCA1P28370 1054 aa17.8■□□□□ 0.44
AC243562.3-201ENST00000559866 KIF5BP33176 963 aa17.8■□□□□ 0.44
AC243562.3-201ENST00000559866 RARS2Q5T160 578 aaKnown RBP17.8■□□□□ 0.44
AC243562.3-201ENST00000559866 TMC7Q7Z402 723 aa17.8■□□□□ 0.44
AC243562.3-201ENST00000559866 ADSSL1Q8N142 457 aa17.8■□□□□ 0.44
AC243562.3-201ENST00000559866 CCDC82Q8N4S0 544 aa17.8■□□□□ 0.44
AC243562.3-201ENST00000559866 ZNF558Q96NG5 402 aa17.8■□□□□ 0.44
AC243562.3-201ENST00000559866 SDF4Q9BRK5 362 aa17.8■□□□□ 0.44
AC243562.3-201ENST00000559866 TMEM117Q9H0C3 514 aa17.8■□□□□ 0.44
AC243562.3-201ENST00000559866 ELAC1Q9H777 363 aaKnown RBP17.8■□□□□ 0.44
AC243562.3-201ENST00000559866 GPR182O15218 404 aa17.79■□□□□ 0.44
AC243562.3-201ENST00000559866 NPR3P17342 541 aa17.79■□□□□ 0.44
AC243562.3-201ENST00000559866 ID4P47928 161 aa17.79■□□□□ 0.44
AC243562.3-201ENST00000559866 ABHD15Q6UXT9 468 aa17.79■□□□□ 0.44
AC243562.3-201ENST00000559866 SLC39A11Q8N1S5 342 aa17.79■□□□□ 0.44
AC243562.3-201ENST00000559866 AUTS2Q8WXX7 1259 aa17.79■□□□□ 0.44
AC243562.3-201ENST00000559866 NKD2Q969F2 451 aaPredicted RBP17.79■□□□□ 0.44
AC243562.3-201ENST00000559866 NGRNQ9NPE2 291 aaKnown RBP17.79■□□□□ 0.44
AC243562.3-201ENST00000559866 LIMD1Q9UGP4 676 aa17.79■□□□□ 0.44
AC243562.3-201ENST00000559866 COL1A2P08123 1366 aa17.79■□□□□ 0.44
AC243562.3-201ENST00000559866 NT5C1B-RDH14C9J2C7 533 aa17.78■□□□□ 0.44
AC243562.3-201ENST00000559866 SH2B2O14492 632 aaPredicted RBP17.78■□□□□ 0.44
AC243562.3-201ENST00000559866 HBP1O60381 514 aa17.78■□□□□ 0.44
AC243562.3-201ENST00000559866 EPCAMP16422 314 aa17.78■□□□□ 0.44
AC243562.3-201ENST00000559866 CRYBB1P53674 252 aaPredicted RBP17.78■□□□□ 0.44
AC243562.3-201ENST00000559866 TPRNQ4KMQ1 711 aa17.78■□□□□ 0.44
AC243562.3-201ENST00000559866 WWC2Q6AWC2 1192 aa17.78■□□□□ 0.44
AC243562.3-201ENST00000559866 ERMP1Q7Z2K6 904 aa17.78■□□□□ 0.44
AC243562.3-201ENST00000559866 HEATR3Q7Z4Q2 680 aa17.78■□□□□ 0.44
AC243562.3-201ENST00000559866 TMEM173Q86WV6 379 aaPredicted RBP17.78■□□□□ 0.44
AC243562.3-201ENST00000559866 LRRC43Q8N309 656 aa17.78■□□□□ 0.44
AC243562.3-201ENST00000559866 MRPL43Q8N983 215 aaKnown RBP17.78■□□□□ 0.44
AC243562.3-201ENST00000559866 ZNF668Q96K58 619 aaPredicted RBP17.78■□□□□ 0.44
AC243562.3-201ENST00000559866 LZTS2Q9BRK4 669 aa17.78■□□□□ 0.44
AC243562.3-201ENST00000559866 PUF60Q9UHX1 559 aaKnown RBP17.78■□□□□ 0.44
AC243562.3-201ENST00000559866 PRC1O43663 620 aa17.77■□□□□ 0.44
AC243562.3-201ENST00000559866 CHMLP26374 656 aa17.77■□□□□ 0.44
AC243562.3-201ENST00000559866 ITIH3Q06033 890 aa17.77■□□□□ 0.44
AC243562.3-201ENST00000559866 SMC1AQ14683 1233 aaKnown RBP17.77■□□□□ 0.44
AC243562.3-201ENST00000559866 CES5AQ6NT32 575 aa17.77■□□□□ 0.44
AC243562.3-201ENST00000559866 CASC1Q6TDU7 716 aa17.77■□□□□ 0.44
AC243562.3-201ENST00000559866 ECHDC2Q86YB7 292 aa17.77■□□□□ 0.44
AC243562.3-201ENST00000559866 ZDHHC14Q8IZN3 488 aa17.77■□□□□ 0.44
AC243562.3-201ENST00000559866 TDRD5Q8NAT2 981 aaKnown RBP17.77■□□□□ 0.44
AC243562.3-201ENST00000559866 FLCNQ8NFG4 579 aa17.77■□□□□ 0.44
AC243562.3-201ENST00000559866 TNPO1Q92973 898 aaKnown RBP17.77■□□□□ 0.44
AC243562.3-201ENST00000559866 NECTIN4Q96NY8 510 aa17.77■□□□□ 0.44
AC243562.3-201ENST00000559866 SPG21Q9NZD8 308 aa17.77■□□□□ 0.44
AC243562.3-201ENST00000559866 CACNA1AO00555 2505 aa17.76■□□□□ 0.43
AC243562.3-201ENST00000559866 CNTNAP5Q8WYK1 1306 aa17.76■□□□□ 0.43
AC243562.3-201ENST00000559866 ZNF292O60281 2723 aa17.76■□□□□ 0.43
AC243562.3-201ENST00000559866 BACH1O14867 736 aa17.76■□□□□ 0.43
AC243562.3-201ENST00000559866 ADAMTS3O15072 1205 aa17.76■□□□□ 0.43
AC243562.3-201ENST00000559866 DHX15O43143 795 aaKnown RBP17.76■□□□□ 0.43
AC243562.3-201ENST00000559866 GNAQP50148 359 aa17.76■□□□□ 0.43
AC243562.3-201ENST00000559866 SLC26A2P50443 739 aa17.76■□□□□ 0.43
AC243562.3-201ENST00000559866 METAP2P50579 478 aaKnown RBP eCLIP17.76■□□□□ 0.43
AC243562.3-201ENST00000559866 CLCN3P51790 818 aa17.76■□□□□ 0.43
AC243562.3-201ENST00000559866 CLCN5P51795 746 aa17.76■□□□□ 0.43
AC243562.3-201ENST00000559866 CEP55Q53EZ4 464 aa17.76■□□□□ 0.43
AC243562.3-201ENST00000559866 MCTP2Q6DN12 878 aa17.76■□□□□ 0.43
AC243562.3-201ENST00000559866 KIAA1841Q6NSI8 718 aa17.76■□□□□ 0.43
AC243562.3-201ENST00000559866 NFXL1Q6ZNB6 911 aa17.76■□□□□ 0.43
AC243562.3-201ENST00000559866 TMTC3Q6ZXV5 915 aa17.76■□□□□ 0.43
AC243562.3-201ENST00000559866 TRMT1LQ7Z2T5 733 aaKnown RBP17.76■□□□□ 0.43
AC243562.3-201ENST00000559866 BCL7CQ8WUZ0 217 aaPredicted RBP17.76■□□□□ 0.43
AC243562.3-201ENST00000559866 ANO3Q9BYT9 981 aa17.76■□□□□ 0.43
AC243562.3-201ENST00000559866 MFSD1Q9H3U5 465 aa17.76■□□□□ 0.43
AC243562.3-201ENST00000559866 ZNF302Q9NR11 478 aa17.76■□□□□ 0.43
AC243562.3-201ENST00000559866 FAM186AA6NE01 2351 aa17.76■□□□□ 0.43
AC243562.3-201ENST00000559866 MED19A0JLT2 244 aaPredicted RBP17.75■□□□□ 0.43
AC243562.3-201ENST00000559866 MEIS1O00470 390 aa17.75■□□□□ 0.43
AC243562.3-201ENST00000559866 FGFR4P22455 802 aa17.75■□□□□ 0.43
AC243562.3-201ENST00000559866 CA8P35219 290 aa17.75■□□□□ 0.43
AC243562.3-201ENST00000559866 PPM1AP35813 382 aa17.75■□□□□ 0.43
AC243562.3-201ENST00000559866 MTHFRP42898 656 aa17.75■□□□□ 0.43
AC243562.3-201ENST00000559866 ZNF484Q5JVG2 852 aa17.75■□□□□ 0.43
AC243562.3-201ENST00000559866 SWSAP1Q6NVH7 229 aa17.75■□□□□ 0.43
AC243562.3-201ENST00000559866 PDXDC2PQ6P474 469 aa17.75■□□□□ 0.43
AC243562.3-201ENST00000559866 LINC01465Q8N7H1 131 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms