RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 POLNQ7Z5Q5 900 aa5.49□□□□□ -1.53
SPG11-218ENST00000559754 FILIP1Q7Z7B0 1213 aa5.49□□□□□ -1.53
SPG11-218ENST00000559754 NME9Q86XW9 330 aa5.49□□□□□ -1.53
SPG11-218ENST00000559754 EDAQ92838 391 aa5.49□□□□□ -1.53
SPG11-218ENST00000559754 LPPQ93052 612 aa5.49□□□□□ -1.53
SPG11-218ENST00000559754 KIAA1683Q9H0B3 1180 aa5.49□□□□□ -1.53
SPG11-218ENST00000559754 VWA7Q9Y334 891 aa5.49□□□□□ -1.53
SPG11-218ENST00000559754 SLC30A1Q9Y6M5 507 aa5.49□□□□□ -1.53
SPG11-218ENST00000559754 PTPDC1A2A3K4 754 aa5.48□□□□□ -1.53
SPG11-218ENST00000559754 PMS2P1A4D2B8 440 aa5.48□□□□□ -1.53
SPG11-218ENST00000559754 ASMTLO95671 621 aa5.48□□□□□ -1.53
SPG11-218ENST00000559754 HMGB1P09429 215 aaKnown RBP5.48□□□□□ -1.53
SPG11-218ENST00000559754 CCDC144BQ3MJ40 725 aa5.48□□□□□ -1.53
SPG11-218ENST00000559754 PIK3R6Q5UE93 754 aa5.48□□□□□ -1.53
SPG11-218ENST00000559754 SPRED1Q7Z699 444 aa5.48□□□□□ -1.53
SPG11-218ENST00000559754 RTN4RL1Q86UN2 441 aaPredicted RBP5.48□□□□□ -1.53
SPG11-218ENST00000559754 FUKQ8N0W3 1084 aa5.48□□□□□ -1.53
SPG11-218ENST00000559754 FOXRED1Q96CU9 486 aaPredicted RBP5.48□□□□□ -1.53
SPG11-218ENST00000559754 FAM89AQ96GI7 184 aa5.48□□□□□ -1.53
SPG11-218ENST00000559754 ADOQ96SZ5 270 aa5.48□□□□□ -1.53
SPG11-218ENST00000559754 DPYSL5Q9BPU6 564 aa5.48□□□□□ -1.53
SPG11-218ENST00000559754 NELFAQ9H3P2 528 aa5.48□□□□□ -1.53
SPG11-218ENST00000559754 MAGEC2Q9UBF1 373 aaPredicted RBP5.48□□□□□ -1.53
SPG11-218ENST00000559754 FAM184BQ9ULE4 1060 aa5.48□□□□□ -1.53
SPG11-218ENST00000559754 H2AFYO75367 372 aaKnown RBP5.47□□□□□ -1.53
SPG11-218ENST00000559754 STAT5BP51692 787 aa5.47□□□□□ -1.53
SPG11-218ENST00000559754 PABPC4Q13310 644 aaKnown RBP eCLIP5.47□□□□□ -1.53
SPG11-218ENST00000559754 NOLC1Q14978 699 aaKnown RBP eCLIP5.47□□□□□ -1.53
SPG11-218ENST00000559754 TCEA2Q15560 299 aa5.47□□□□□ -1.53
SPG11-218ENST00000559754 TBR1Q16650 682 aa5.47□□□□□ -1.53
SPG11-218ENST00000559754 MAML3Q96JK9 1138 aa5.47□□□□□ -1.53
SPG11-218ENST00000559754 OR14A2Q96R54 314 aa5.47□□□□□ -1.53
SPG11-218ENST00000559754 INTS7Q9NVH2 962 aaKnown RBP5.47□□□□□ -1.53
SPG11-218ENST00000559754 SAE1Q9UBE0 346 aaPredicted RBP5.47□□□□□ -1.53
SPG11-218ENST00000559754 B4GALT6Q9UBX8 382 aa5.47□□□□□ -1.53
SPG11-218ENST00000559754 UBA6A0AVT1 1052 aaPredicted RBP5.46□□□□□ -1.54
SPG11-218ENST00000559754 MATN2O00339 956 aa5.46□□□□□ -1.54
SPG11-218ENST00000559754 TRAF5O00463 557 aa5.46□□□□□ -1.54
SPG11-218ENST00000559754 PPP1R12AO14974 1030 aaPredicted RBP5.46□□□□□ -1.54
SPG11-218ENST00000559754 MAFGO15525 162 aa5.46□□□□□ -1.54
SPG11-218ENST00000559754 PRLP01236 227 aa5.46□□□□□ -1.54
SPG11-218ENST00000559754 JMJD7P0C870 316 aa5.46□□□□□ -1.54
SPG11-218ENST00000559754 TACR2P21452 398 aa5.46□□□□□ -1.54
SPG11-218ENST00000559754 SLC6A3Q01959 620 aa5.46□□□□□ -1.54
SPG11-218ENST00000559754 ADCY1Q08828 1119 aa5.46□□□□□ -1.54
SPG11-218ENST00000559754 ZNF460Q14592 562 aa5.46□□□□□ -1.54
SPG11-218ENST00000559754 SPDYAQ5MJ70 313 aa5.46□□□□□ -1.54
SPG11-218ENST00000559754 TTC38Q5R3I4 469 aa5.46□□□□□ -1.54
SPG11-218ENST00000559754 CDCA2Q69YH5 1023 aaPredicted RBP5.46□□□□□ -1.54
SPG11-218ENST00000559754 KLHDC10Q6PID8 442 aa5.46□□□□□ -1.54
SPG11-218ENST00000559754 USP51Q70EK9 711 aa5.46□□□□□ -1.54
SPG11-218ENST00000559754 HOMER1Q86YM7 354 aa5.46□□□□□ -1.54
SPG11-218ENST00000559754 KIAA1958Q8N8K9 716 aa5.46□□□□□ -1.54
SPG11-218ENST00000559754 CFHR4Q92496 578 aa5.46□□□□□ -1.54
SPG11-218ENST00000559754 GFM2Q969S9 779 aaKnown RBP5.46□□□□□ -1.54
SPG11-218ENST00000559754 PLA2G12BQ9BX93 195 aa5.46□□□□□ -1.54
SPG11-218ENST00000559754 VPS11Q9H270 941 aa5.46□□□□□ -1.54
SPG11-218ENST00000559754 SRRDQ9UH36 339 aa5.46□□□□□ -1.54
SPG11-218ENST00000559754 CBX4O00257 560 aa5.45□□□□□ -1.54
SPG11-218ENST00000559754 C6P13671 934 aa5.45□□□□□ -1.54
SPG11-218ENST00000559754 ACO1P21399 889 aaKnown RBP5.45□□□□□ -1.54
SPG11-218ENST00000559754 DUSP8Q13202 625 aa5.45□□□□□ -1.54
SPG11-218ENST00000559754 EPHA7Q15375 998 aa5.45□□□□□ -1.54
SPG11-218ENST00000559754 DGKDQ16760 1214 aa5.45□□□□□ -1.54
SPG11-218ENST00000559754 CFAP100Q494V2 611 aa5.45□□□□□ -1.54
SPG11-218ENST00000559754 SLFN12LQ6IEE8 588 aa5.45□□□□□ -1.54
SPG11-218ENST00000559754 OR14K1Q8NGZ2 314 aa5.45□□□□□ -1.54
SPG11-218ENST00000559754 KANSL2Q9H9L4 492 aa5.45□□□□□ -1.54
SPG11-218ENST00000559754 PLA2G3Q9NZ20 509 aa5.45□□□□□ -1.54
SPG11-218ENST00000559754 ZKSCAN5Q9Y2L8 839 aa5.45□□□□□ -1.54
SPG11-218ENST00000559754 DVL2O14641 736 aa5.44□□□□□ -1.54
SPG11-218ENST00000559754 SLC26A4O43511 780 aa5.44□□□□□ -1.54
SPG11-218ENST00000559754 SDSP20132 328 aa5.44□□□□□ -1.54
SPG11-218ENST00000559754 GDF5P43026 501 aa5.44□□□□□ -1.54
SPG11-218ENST00000559754 BCAR1P56945 870 aa5.44□□□□□ -1.54
SPG11-218ENST00000559754 HHEXQ03014 270 aa5.44□□□□□ -1.54
SPG11-218ENST00000559754 HGFACQ04756 655 aa5.44□□□□□ -1.54
SPG11-218ENST00000559754 CRIP3Q6Q6R5 217 aa5.44□□□□□ -1.54
SPG11-218ENST00000559754 ADGRE4PQ86SQ3 457 aa5.44□□□□□ -1.54
SPG11-218ENST00000559754 ZZZ3Q8IYH5 903 aa5.44□□□□□ -1.54
SPG11-218ENST00000559754 SHCBP1Q8NEM2 672 aa5.44□□□□□ -1.54
SPG11-218ENST00000559754 APPBP2Q92624 585 aa5.44□□□□□ -1.54
SPG11-218ENST00000559754 RPGRQ92834 1020 aaKnown RBP5.44□□□□□ -1.54
SPG11-218ENST00000559754 TUBGCP5Q96RT8 1024 aa5.44□□□□□ -1.54
SPG11-218ENST00000559754 ORAI3Q9BRQ5 295 aa5.44□□□□□ -1.54
SPG11-218ENST00000559754 ZNF747Q9BV97 191 aa5.44□□□□□ -1.54
SPG11-218ENST00000559754 KCMF1Q9P0J7 381 aa5.44□□□□□ -1.54
SPG11-218ENST00000559754 DENND2AQ9ULE3 1009 aa5.44□□□□□ -1.54
SPG11-218ENST00000559754 CTDP1Q9Y5B0 961 aaPredicted RBP5.44□□□□□ -1.54
SPG11-218ENST00000559754 GAS7O60861 476 aa5.43□□□□□ -1.54
SPG11-218ENST00000559754 FZD7O75084 574 aa5.43□□□□□ -1.54
SPG11-218ENST00000559754 FSHBP01225 129 aa5.43□□□□□ -1.54
SPG11-218ENST00000559754 AMHP03971 560 aa5.43□□□□□ -1.54
SPG11-218ENST00000559754 MSX2P35548 267 aaPredicted RBP5.43□□□□□ -1.54
SPG11-218ENST00000559754 RGS3P49796 1198 aa5.43□□□□□ -1.54
SPG11-218ENST00000559754 ADAM15Q13444 863 aa5.43□□□□□ -1.54
SPG11-218ENST00000559754 GRM7Q14831 915 aa5.43□□□□□ -1.54
SPG11-218ENST00000559754 PRAMEF9Q5VWM5 478 aa5.43□□□□□ -1.54
SPG11-218ENST00000559754 TIGD7Q6NT04 549 aaPredicted RBP5.43□□□□□ -1.54
SPG11-218ENST00000559754 MAMDC4Q6UXC1 1216 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms