RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 ADD1P35611 737 aaKnown RBP14.86□□□□□ -0.03
TPM1-220ENST00000559556 METAP2P50579 478 aaKnown RBP eCLIP14.86□□□□□ -0.03
TPM1-220ENST00000559556 CRYBB1P53674 252 aaPredicted RBP14.86□□□□□ -0.03
TPM1-220ENST00000559556 KIZQ2M2Z5 673 aa14.86□□□□□ -0.03
TPM1-220ENST00000559556 SWSAP1Q6NVH7 229 aa14.86□□□□□ -0.03
TPM1-220ENST00000559556 FAM228AQ86W67 206 aa14.86□□□□□ -0.03
TPM1-220ENST00000559556 RNF135Q8IUD6 432 aa14.86□□□□□ -0.03
TPM1-220ENST00000559556 SMAP1Q8IYB5 467 aaPredicted RBP14.86□□□□□ -0.03
TPM1-220ENST00000559556 CCDC12Q8WUD4 166 aaPredicted RBP14.86□□□□□ -0.03
TPM1-220ENST00000559556 ZNF577Q9BSK1 485 aa14.86□□□□□ -0.03
TPM1-220ENST00000559556 MUTYHQ9UIF7 546 aa14.86□□□□□ -0.03
TPM1-220ENST00000559556 CCDC196A0A1B0GTZ2 297 aa14.85□□□□□ -0.03
TPM1-220ENST00000559556 TBKBP1A7MCY6 615 aa14.85□□□□□ -0.03
TPM1-220ENST00000559556 ADAMTS3O15072 1205 aa14.85□□□□□ -0.03
TPM1-220ENST00000559556 GPR32O75388 356 aa14.85□□□□□ -0.03
TPM1-220ENST00000559556 CDC45O75419 566 aa14.85□□□□□ -0.03
TPM1-220ENST00000559556 DSC3Q14574 896 aa14.85□□□□□ -0.03
TPM1-220ENST00000559556 PKN1Q16512 942 aa14.85□□□□□ -0.03
TPM1-220ENST00000559556 FAM102BQ5T8I3 360 aa14.85□□□□□ -0.03
TPM1-220ENST00000559556 HFE2Q6ZVN8 426 aa14.85□□□□□ -0.03
TPM1-220ENST00000559556 SKAP1Q86WV1 359 aa14.85□□□□□ -0.03
TPM1-220ENST00000559556 COLGALT1Q8NBJ5 622 aa14.85□□□□□ -0.03
TPM1-220ENST00000559556 OSMRQ99650 979 aa14.85□□□□□ -0.03
TPM1-220ENST00000559556 ELAC1Q9H777 363 aaKnown RBP14.85□□□□□ -0.03
TPM1-220ENST00000559556 C6orf50Q9HD87 102 aa14.85□□□□□ -0.03
TPM1-220ENST00000559556 TLR9Q9NR96 1032 aa14.85□□□□□ -0.03
TPM1-220ENST00000559556 AAASQ9NRG9 546 aa14.85□□□□□ -0.03
TPM1-220ENST00000559556 TMEM161AQ9NX61 479 aa14.85□□□□□ -0.03
TPM1-220ENST00000559556 PCDHGC5Q9Y5F6 944 aa14.85□□□□□ -0.03
TPM1-220ENST00000559556 LOC730098B7Z3J9 87 aa14.84□□□□□ -0.03
TPM1-220ENST00000559556 FGF18O76093 207 aa14.84□□□□□ -0.03
TPM1-220ENST00000559556 VTNP04004 478 aa14.84□□□□□ -0.03
TPM1-220ENST00000559556 IBSPP21815 317 aaPredicted RBP14.84□□□□□ -0.03
TPM1-220ENST00000559556 CIITAP33076 1130 aa14.84□□□□□ -0.03
TPM1-220ENST00000559556 FAM189BP81408 668 aa14.84□□□□□ -0.03
TPM1-220ENST00000559556 APOBRQ0VD83 1088 aa14.84□□□□□ -0.03
TPM1-220ENST00000559556 SPOUT1Q5T280 376 aaKnown RBP14.84□□□□□ -0.03
TPM1-220ENST00000559556 CENPQQ7L2Z9 268 aaPredicted RBP14.84□□□□□ -0.03
TPM1-220ENST00000559556 RBM23Q86U06 439 aaKnown RBP14.84□□□□□ -0.03
TPM1-220ENST00000559556 CKAP2LQ8IYA6 745 aa14.84□□□□□ -0.03
TPM1-220ENST00000559556 LINC01465Q8N7H1 131 aa14.84□□□□□ -0.03
TPM1-220ENST00000559556 KCNB2Q92953 911 aa14.84□□□□□ -0.03
TPM1-220ENST00000559556 LENG9Q96B70 501 aa14.84□□□□□ -0.03
TPM1-220ENST00000559556 FAM167AQ96KS9 214 aa14.84□□□□□ -0.03
TPM1-220ENST00000559556 CWH43Q9H720 699 aa14.84□□□□□ -0.03
TPM1-220ENST00000559556 HCSTQ9UBK5 93 aa14.84□□□□□ -0.03
TPM1-220ENST00000559556 TCEAL9Q9UHQ7 104 aa14.84□□□□□ -0.03
TPM1-220ENST00000559556 NAP1L2Q9ULW6 460 aaPredicted RBP14.84□□□□□ -0.03
TPM1-220ENST00000559556 BARX2Q9UMQ3 279 aaPredicted RBP14.84□□□□□ -0.03
TPM1-220ENST00000559556 CEP131Q9UPN4 1083 aa14.84□□□□□ -0.03
TPM1-220ENST00000559556 PCDHA10Q9Y5I2 948 aa14.84□□□□□ -0.03
TPM1-220ENST00000559556 ZNF292O60281 2723 aa14.84□□□□□ -0.03
TPM1-220ENST00000559556 PTPRZ1P23471 2315 aaPredicted RBP14.83□□□□□ -0.03
TPM1-220ENST00000559556 FSCN2O14926 492 aa14.83□□□□□ -0.04
TPM1-220ENST00000559556 PRPF3O43395 683 aaKnown RBP14.83□□□□□ -0.04
TPM1-220ENST00000559556 PSAPP07602 524 aa14.83□□□□□ -0.04
TPM1-220ENST00000559556 CPA1P15085 419 aa14.83□□□□□ -0.04
TPM1-220ENST00000559556 GNA11P29992 359 aa14.83□□□□□ -0.04
TPM1-220ENST00000559556 FGD1P98174 961 aa14.83□□□□□ -0.04
TPM1-220ENST00000559556 CBX2Q14781 532 aaPredicted RBP14.83□□□□□ -0.04
TPM1-220ENST00000559556 PDE12Q6L8Q7 609 aaKnown RBP14.83□□□□□ -0.04
TPM1-220ENST00000559556 FBXL16Q8N461 479 aa14.83□□□□□ -0.04
TPM1-220ENST00000559556 METTL13Q8N6R0 699 aa14.83□□□□□ -0.04
TPM1-220ENST00000559556 EDAQ92838 391 aa14.83□□□□□ -0.04
TPM1-220ENST00000559556 PPP1R16BQ96T49 567 aa14.83□□□□□ -0.04
TPM1-220ENST00000559556 CDCA3Q99618 268 aaPredicted RBP14.83□□□□□ -0.04
TPM1-220ENST00000559556 AGXT2Q9BYV1 514 aa14.83□□□□□ -0.04
TPM1-220ENST00000559556 TLE6Q9H808 572 aa14.83□□□□□ -0.04
TPM1-220ENST00000559556 ATP6V0A4Q9HBG4 840 aa14.83□□□□□ -0.04
TPM1-220ENST00000559556 TYW1Q9NV66 732 aaKnown RBP14.83□□□□□ -0.04
TPM1-220ENST00000559556 LZTS1Q9Y250 596 aa14.83□□□□□ -0.04
TPM1-220ENST00000559556 USP15Q9Y4E8 981 aaPredicted RBP14.83□□□□□ -0.04
TPM1-220ENST00000559556 FRYLO94915 3013 aa14.82□□□□□ -0.04
TPM1-220ENST00000559556 WDR64B1ANS9 1081 aa14.82□□□□□ -0.04
TPM1-220ENST00000559556 MAGEB2O15479 319 aa14.82□□□□□ -0.04
TPM1-220ENST00000559556 PPFIA3O75145 1194 aa14.82□□□□□ -0.04
TPM1-220ENST00000559556 FGFR1P11362 822 aa14.82□□□□□ -0.04
TPM1-220ENST00000559556 LAG3P18627 525 aa14.82□□□□□ -0.04
TPM1-220ENST00000559556 CLCN3P51790 818 aa14.82□□□□□ -0.04
TPM1-220ENST00000559556 ERVFC1P60507 584 aa14.82□□□□□ -0.04
TPM1-220ENST00000559556 NHLH1Q02575 133 aa14.82□□□□□ -0.04
TPM1-220ENST00000559556 KCNC3Q14003 757 aa14.82□□□□□ -0.04
TPM1-220ENST00000559556 NTRK3Q16288 839 aa14.82□□□□□ -0.04
TPM1-220ENST00000559556 DUSP6Q16828 381 aa14.82□□□□□ -0.04
TPM1-220ENST00000559556 PRR16Q569H4 304 aa14.82□□□□□ -0.04
TPM1-220ENST00000559556 Q6ZUG5 572 aa14.82□□□□□ -0.04
TPM1-220ENST00000559556 THNSL1Q8IYQ7 743 aa14.82□□□□□ -0.04
TPM1-220ENST00000559556 ZNF710Q8N1W2 664 aa14.82□□□□□ -0.04
TPM1-220ENST00000559556 VN1R2Q8NFZ6 395 aa14.82□□□□□ -0.04
TPM1-220ENST00000559556 BICD2Q8TD16 824 aa14.82□□□□□ -0.04
TPM1-220ENST00000559556 RASGRP4Q8TDF6 673 aa14.82□□□□□ -0.04
TPM1-220ENST00000559556 SUSD6Q92537 303 aa14.82□□□□□ -0.04
TPM1-220ENST00000559556 BRF1Q92994 677 aa14.82□□□□□ -0.04
TPM1-220ENST00000559556 MFSD14AQ96MC6 490 aa14.82□□□□□ -0.04
TPM1-220ENST00000559556 FBXL18Q96ME1 805 aa14.82□□□□□ -0.04
TPM1-220ENST00000559556 MAP7D2Q96T17 732 aa14.82□□□□□ -0.04
TPM1-220ENST00000559556 RNF19AQ9NV58 838 aa14.82□□□□□ -0.04
TPM1-220ENST00000559556 GABBR1Q9UBS5 961 aa14.82□□□□□ -0.04
TPM1-220ENST00000559556 HOXA2O43364 376 aa14.81□□□□□ -0.04
TPM1-220ENST00000559556 ZNF862O60290 1169 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms