RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 ASB1Q9Y576 335 aa4.76□□□□□ -1.65
CASC4-210ENST00000559550 SPO11Q9Y5K1 396 aa4.76□□□□□ -1.65
CASC4-210ENST00000559550 MROH6A6NGR9 719 aa4.75□□□□□ -1.65
CASC4-210ENST00000559550 H0Y858 1186 aa4.75□□□□□ -1.65
CASC4-210ENST00000559550 B4GALT3O60512 393 aa4.75□□□□□ -1.65
CASC4-210ENST00000559550 ADCY8P40145 1251 aa4.75□□□□□ -1.65
CASC4-210ENST00000559550 STAT3P40763 770 aa4.75□□□□□ -1.65
CASC4-210ENST00000559550 SCNN1BP51168 640 aa4.75□□□□□ -1.65
CASC4-210ENST00000559550 CD83Q01151 205 aa4.75□□□□□ -1.65
CASC4-210ENST00000559550 ZNF174Q15697 407 aa4.75□□□□□ -1.65
CASC4-210ENST00000559550 KANK2Q63ZY3 851 aa4.75□□□□□ -1.65
CASC4-210ENST00000559550 LCORQ96JN0 433 aaPredicted RBP4.75□□□□□ -1.65
CASC4-210ENST00000559550 BTBD2Q9BX70 525 aa4.75□□□□□ -1.65
CASC4-210ENST00000559550 OR10A5Q9H207 317 aa4.75□□□□□ -1.65
CASC4-210ENST00000559550 MS4A5Q9H3V2 200 aa4.75□□□□□ -1.65
CASC4-210ENST00000559550 ZMAT4Q9H898 229 aa4.75□□□□□ -1.65
CASC4-210ENST00000559550 SPTLC3Q9NUV7 552 aa4.75□□□□□ -1.65
CASC4-210ENST00000559550 INVSQ9Y283 1065 aa4.75□□□□□ -1.65
CASC4-210ENST00000559550 HS3ST3A1Q9Y663 406 aa4.75□□□□□ -1.65
CASC4-210ENST00000559550 CADPSQ9ULU8 1353 aa4.75□□□□□ -1.65
CASC4-210ENST00000559550 C9orf118A6NHY6 69 aa4.74□□□□□ -1.65
CASC4-210ENST00000559550 PRLP01236 227 aa4.74□□□□□ -1.65
CASC4-210ENST00000559550 CYP17A1P05093 508 aa4.74□□□□□ -1.65
CASC4-210ENST00000559550 RGS3P49796 1198 aa4.74□□□□□ -1.65
CASC4-210ENST00000559550 SLC6A3Q01959 620 aa4.74□□□□□ -1.65
CASC4-210ENST00000559550 ALDH6A1Q02252 535 aaKnown RBP4.74□□□□□ -1.65
CASC4-210ENST00000559550 NFATC3Q12968 1075 aa4.74□□□□□ -1.65
CASC4-210ENST00000559550 ICAM4Q14773 271 aa4.74□□□□□ -1.65
CASC4-210ENST00000559550 EPHA7Q15375 998 aa4.74□□□□□ -1.65
CASC4-210ENST00000559550 WDR72Q3MJ13 1102 aa4.74□□□□□ -1.65
CASC4-210ENST00000559550 TAF7LQ5H9L4 462 aa4.74□□□□□ -1.65
CASC4-210ENST00000559550 ZNF662Q6ZS27 426 aa4.74□□□□□ -1.65
CASC4-210ENST00000559550 Q6ZUG5 572 aa4.74□□□□□ -1.65
CASC4-210ENST00000559550 EFHBQ8N7U6 833 aa4.74□□□□□ -1.65
CASC4-210ENST00000559550 OR2W6PQ8NHA6 318 aa4.74□□□□□ -1.65
CASC4-210ENST00000559550 RTF1Q92541 710 aaKnown RBP4.74□□□□□ -1.65
CASC4-210ENST00000559550 FOXB1Q99853 325 aa4.74□□□□□ -1.65
CASC4-210ENST00000559550 KATNBL1Q9H079 304 aa4.74□□□□□ -1.65
CASC4-210ENST00000559550 TOMM22Q9NS69 142 aa4.74□□□□□ -1.65
CASC4-210ENST00000559550 ADAM29Q9UKF5 820 aa4.74□□□□□ -1.65
CASC4-210ENST00000559550 CDC42EP3Q9UKI2 254 aa4.74□□□□□ -1.65
CASC4-210ENST00000559550 PTPN22Q9Y2R2 807 aa4.74□□□□□ -1.65
CASC4-210ENST00000559550 LCHNA4D1U4 455 aa4.73□□□□□ -1.65
CASC4-210ENST00000559550 NEMP1O14524 444 aa4.73□□□□□ -1.65
CASC4-210ENST00000559550 FKBP9O95302 570 aa4.73□□□□□ -1.65
CASC4-210ENST00000559550 VIL1P09327 827 aaKnown RBP4.73□□□□□ -1.65
CASC4-210ENST00000559550 ZNF888P0CJ79 500 aaPredicted RBP4.73□□□□□ -1.65
CASC4-210ENST00000559550 BPIP17213 487 aa4.73□□□□□ -1.65
CASC4-210ENST00000559550 CSF2RBP32927 897 aa4.73□□□□□ -1.65
CASC4-210ENST00000559550 ID4P47928 161 aa4.73□□□□□ -1.65
CASC4-210ENST00000559550 KPNA1P52294 538 aaPredicted RBP4.73□□□□□ -1.65
CASC4-210ENST00000559550 IL2P60568 153 aa4.73□□□□□ -1.65
CASC4-210ENST00000559550 SMAD3P84022 425 aaKnown RBP4.73□□□□□ -1.65
CASC4-210ENST00000559550 STRN3Q13033 797 aa4.73□□□□□ -1.65
CASC4-210ENST00000559550 TOP3AQ13472 1001 aaPredicted RBP4.73□□□□□ -1.65
CASC4-210ENST00000559550 MOGSQ13724 837 aa4.73□□□□□ -1.65
CASC4-210ENST00000559550 MYBPC3Q14896 1274 aa4.73□□□□□ -1.65
CASC4-210ENST00000559550 DPP8Q6V1X1 898 aaPredicted RBP4.73□□□□□ -1.65
CASC4-210ENST00000559550 FKBP9P1Q75LS8 142 aa4.73□□□□□ -1.65
CASC4-210ENST00000559550 CXXC5Q7LFL8 322 aaKnown RBP4.73□□□□□ -1.65
CASC4-210ENST00000559550 GPR155Q7Z3F1 870 aa4.73□□□□□ -1.65
CASC4-210ENST00000559550 KLHL36Q8N4N3 616 aa4.73□□□□□ -1.65
CASC4-210ENST00000559550 AJUBAQ96IF1 538 aa4.73□□□□□ -1.65
CASC4-210ENST00000559550 FAM126AQ9BYI3 521 aaPredicted RBP4.73□□□□□ -1.65
CASC4-210ENST00000559550 KLC2Q9H0B6 622 aa4.73□□□□□ -1.65
CASC4-210ENST00000559550 SEMA4AQ9H3S1 761 aa4.73□□□□□ -1.65
CASC4-210ENST00000559550 CAAP1Q9H8G2 361 aa4.73□□□□□ -1.65
CASC4-210ENST00000559550 BARX1Q9HBU1 254 aaPredicted RBP4.73□□□□□ -1.65
CASC4-210ENST00000559550 EMC7Q9NPA0 242 aa4.73□□□□□ -1.65
CASC4-210ENST00000559550 C11orf21Q9P2W6 132 aa4.73□□□□□ -1.65
CASC4-210ENST00000559550 ZDHHC9Q9Y397 364 aa4.73□□□□□ -1.65
CASC4-210ENST00000559550 UBA6A0AVT1 1052 aaPredicted RBP4.72□□□□□ -1.65
CASC4-210ENST00000559550 CLSTN1O94985 981 aa4.72□□□□□ -1.65
CASC4-210ENST00000559550 POLD1P28340 1107 aa4.72□□□□□ -1.65
CASC4-210ENST00000559550 LSSP48449 732 aa4.72□□□□□ -1.65
CASC4-210ENST00000559550 KIAA2012Q0VF49 1180 aa4.72□□□□□ -1.65
CASC4-210ENST00000559550 DHCR24Q15392 516 aa4.72□□□□□ -1.65
CASC4-210ENST00000559550 TTC38Q5R3I4 469 aa4.72□□□□□ -1.65
CASC4-210ENST00000559550 SLFN12LQ6IEE8 588 aa4.72□□□□□ -1.65
CASC4-210ENST00000559550 DDX46Q7L014 1031 aaKnown RBP4.72□□□□□ -1.65
CASC4-210ENST00000559550 KBTBD2Q8IY47 623 aa4.72□□□□□ -1.65
CASC4-210ENST00000559550 LGI4Q8N135 537 aa4.72□□□□□ -1.65
CASC4-210ENST00000559550 BCL6BQ8N143 479 aaPredicted RBP4.72□□□□□ -1.65
CASC4-210ENST00000559550 AFAP1L2Q8N4X5 818 aa4.72□□□□□ -1.65
CASC4-210ENST00000559550 CHAC2Q8WUX2 184 aa4.72□□□□□ -1.65
CASC4-210ENST00000559550 MAML3Q96JK9 1138 aa4.72□□□□□ -1.65
CASC4-210ENST00000559550 ZDHHC5Q9C0B5 715 aa4.72□□□□□ -1.65
CASC4-210ENST00000559550 POFUT1Q9H488 388 aa4.72□□□□□ -1.65
CASC4-210ENST00000559550 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.72□□□□□ -1.65
CASC4-210ENST00000559550 TNFRSF18Q9Y5U5 241 aa4.72□□□□□ -1.65
CASC4-210ENST00000559550 SBNO2Q9Y2G9 1366 aa4.72□□□□□ -1.65
CASC4-210ENST00000559550 POU3F3P20264 500 aaPredicted RBP4.71□□□□□ -1.66
CASC4-210ENST00000559550 APEX1P27695 318 aaKnown RBP4.71□□□□□ -1.66
CASC4-210ENST00000559550 ETV4P43268 484 aa4.71□□□□□ -1.66
CASC4-210ENST00000559550 KCNQ1P51787 676 aa4.71□□□□□ -1.66
CASC4-210ENST00000559550 ROM1Q03395 351 aa4.71□□□□□ -1.66
CASC4-210ENST00000559550 NOLC1Q14978 699 aaKnown RBP eCLIP4.71□□□□□ -1.66
CASC4-210ENST00000559550 SART3Q15020 963 aaKnown RBP4.71□□□□□ -1.66
CASC4-210ENST00000559550 R3HDM1Q15032 1099 aaKnown RBP4.71□□□□□ -1.66
CASC4-210ENST00000559550 EIF4HQ15056 248 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms