RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 FAM86B2P0C5J1 330 aa6.62□□□□□ -1.35
USP3-212ENST00000559276 CALM1P0DP23 149 aa6.62□□□□□ -1.35
USP3-212ENST00000559276 CALM2P0DP24 149 aa6.62□□□□□ -1.35
USP3-212ENST00000559276 CALM3P0DP25 149 aa6.62□□□□□ -1.35
USP3-212ENST00000559276 CDC27P30260 824 aa6.62□□□□□ -1.35
USP3-212ENST00000559276 CDC25BP30305 580 aa6.62□□□□□ -1.35
USP3-212ENST00000559276 IRS1P35568 1242 aa6.62□□□□□ -1.35
USP3-212ENST00000559276 ADAM15Q13444 863 aa6.62□□□□□ -1.35
USP3-212ENST00000559276 ANKRD1Q15327 319 aa6.62□□□□□ -1.35
USP3-212ENST00000559276 SMAD2Q15796 467 aaKnown RBP6.62□□□□□ -1.35
USP3-212ENST00000559276 PUS10Q3MIT2 529 aaKnown RBP6.62□□□□□ -1.35
USP3-212ENST00000559276 APOA5Q6Q788 366 aa6.62□□□□□ -1.35
USP3-212ENST00000559276 ABHD15Q6UXT9 468 aa6.62□□□□□ -1.35
USP3-212ENST00000559276 NFXL1Q6ZNB6 911 aa6.62□□□□□ -1.35
USP3-212ENST00000559276 PLPPR4Q7Z2D5 763 aa6.62□□□□□ -1.35
USP3-212ENST00000559276 HEATR3Q7Z4Q2 680 aa6.62□□□□□ -1.35
USP3-212ENST00000559276 MICU3Q86XE3 530 aa6.62□□□□□ -1.35
USP3-212ENST00000559276 ADHFE1Q8IWW8 467 aa6.62□□□□□ -1.35
USP3-212ENST00000559276 TMTC2Q8N394 836 aa6.62□□□□□ -1.35
USP3-212ENST00000559276 RNF214Q8ND24 703 aa6.62□□□□□ -1.35
USP3-212ENST00000559276 FAM200AQ8TCP9 573 aa6.62□□□□□ -1.35
USP3-212ENST00000559276 SPPL3Q8TCT6 385 aa6.62□□□□□ -1.35
USP3-212ENST00000559276 TMEM40Q8WWA1 233 aa6.62□□□□□ -1.35
USP3-212ENST00000559276 ANKRD7Q92527 254 aa6.62□□□□□ -1.35
USP3-212ENST00000559276 GLG1Q92896 1179 aa6.62□□□□□ -1.35
USP3-212ENST00000559276 MSLNLQ96KJ4 702 aa6.62□□□□□ -1.35
USP3-212ENST00000559276 C11orf84Q9BUA3 381 aaPredicted RBP6.62□□□□□ -1.35
USP3-212ENST00000559276 CELF4Q9BZC1 486 aaKnown RBP6.62□□□□□ -1.35
USP3-212ENST00000559276 FAM49AQ9H0Q0 323 aaPredicted RBP6.62□□□□□ -1.35
USP3-212ENST00000559276 LMAN2LQ9H0V9 348 aa6.62□□□□□ -1.35
USP3-212ENST00000559276 AGO4Q9HCK5 861 aaKnown RBP6.62□□□□□ -1.35
USP3-212ENST00000559276 ERVK-5Q9HDB9 667 aa6.62□□□□□ -1.35
USP3-212ENST00000559276 RIC8AQ9NPQ8 531 aa6.62□□□□□ -1.35
USP3-212ENST00000559276 HCSTQ9UBK5 93 aa6.62□□□□□ -1.35
USP3-212ENST00000559276 PAXBP1Q9Y5B6 917 aa6.62□□□□□ -1.35
USP3-212ENST00000559276 PCDHGC5Q9Y5F6 944 aa6.62□□□□□ -1.35
USP3-212ENST00000559276 SLC12A7Q9Y666 1083 aa6.62□□□□□ -1.35
USP3-212ENST00000559276 EVPLQ92817 2033 aa6.62□□□□□ -1.35
USP3-212ENST00000559276 USP34Q70CQ2 3546 aa6.61□□□□□ -1.35
USP3-212ENST00000559276 SMIM35A0A1B0GVV1 85 aa6.61□□□□□ -1.35
USP3-212ENST00000559276 RRN3P2A6NIE6 340 aa6.61□□□□□ -1.35
USP3-212ENST00000559276 SPDYE3A6NKU9 549 aa6.61□□□□□ -1.35
USP3-212ENST00000559276 CSPG5O95196 566 aa6.61□□□□□ -1.35
USP3-212ENST00000559276 ZSCAN20P17040 1043 aaPredicted RBP6.61□□□□□ -1.35
USP3-212ENST00000559276 SYT1P21579 422 aa6.61□□□□□ -1.35
USP3-212ENST00000559276 SSTR3P32745 418 aaPredicted RBP6.61□□□□□ -1.35
USP3-212ENST00000559276 SREBF1P36956 1147 aa6.61□□□□□ -1.35
USP3-212ENST00000559276 STAT5BP51692 787 aa6.61□□□□□ -1.35
USP3-212ENST00000559276 KRT85P78386 507 aa6.61□□□□□ -1.35
USP3-212ENST00000559276 GABPB1Q06547 395 aaPredicted RBP6.61□□□□□ -1.35
USP3-212ENST00000559276 BTG3Q14201 252 aaPredicted RBP6.61□□□□□ -1.35
USP3-212ENST00000559276 CLUL1Q15846 466 aa6.61□□□□□ -1.35
USP3-212ENST00000559276 TMEM266Q2M3C6 531 aa6.61□□□□□ -1.35
USP3-212ENST00000559276 TSGA10IPQ3SY00 556 aa6.61□□□□□ -1.35
USP3-212ENST00000559276 CEP55Q53EZ4 464 aa6.61□□□□□ -1.35
USP3-212ENST00000559276 MTHFD1LQ6UB35 978 aa6.61□□□□□ -1.35
USP3-212ENST00000559276 RBM43Q6ZSC3 357 aaKnown RBP6.61□□□□□ -1.35
USP3-212ENST00000559276 NPAS4Q8IUM7 802 aa6.61□□□□□ -1.35
USP3-212ENST00000559276 CCDC60Q8IWA6 550 aaPredicted RBP6.61□□□□□ -1.35
USP3-212ENST00000559276 CMTR2Q8IYT2 770 aaKnown RBP6.61□□□□□ -1.35
USP3-212ENST00000559276 KIAA0319LQ8IZA0 1049 aa6.61□□□□□ -1.35
USP3-212ENST00000559276 KLHL23Q8NBE8 558 aa6.61□□□□□ -1.35
USP3-212ENST00000559276 VN1R2Q8NFZ6 395 aa6.61□□□□□ -1.35
USP3-212ENST00000559276 P2RX5Q93086 422 aa6.61□□□□□ -1.35
USP3-212ENST00000559276 UIMC1Q96RL1 719 aa6.61□□□□□ -1.35
USP3-212ENST00000559276 PLVAPQ9BX97 442 aa6.61□□□□□ -1.35
USP3-212ENST00000559276 ANO3Q9BYT9 981 aa6.61□□□□□ -1.35
USP3-212ENST00000559276 SCAND2PQ9GZW5 306 aaPredicted RBP6.61□□□□□ -1.35
USP3-212ENST00000559276 DDX19AQ9NUU7 478 aaKnown RBP6.61□□□□□ -1.35
USP3-212ENST00000559276 PRKAG3Q9UGI9 489 aa6.61□□□□□ -1.35
USP3-212ENST00000559276 HCN4Q9Y3Q4 1203 aa6.61□□□□□ -1.35
USP3-212ENST00000559276 NOC2LQ9Y3T9 749 aaKnown RBP6.61□□□□□ -1.35
USP3-212ENST00000559276 TRPV2Q9Y5S1 764 aa6.61□□□□□ -1.35
USP3-212ENST00000559276 SNX14Q9Y5W7 946 aa6.61□□□□□ -1.35
USP3-212ENST00000559276 V9GY48 417 aaPredicted RBP6.61□□□□□ -1.35
USP3-212ENST00000559276 ZNF318Q5VUA4 2279 aa6.61□□□□□ -1.35
USP3-212ENST00000559276 TCHHQ07283 1943 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 SMCO2A6NFE2 343 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 SPDYE4A6NLX3 237 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 SMTNL1A8MU46 457 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 C9IYK1 514 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 KIF2AO00139 706 aaPredicted RBP6.6□□□□□ -1.35
USP3-212ENST00000559276 DCXO43602 365 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 C22orf31O95567 290 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 EYA4O95677 639 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 TUBB4AP04350 444 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 SCG2P13521 617 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 ALADP13716 330 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 CPA1P15085 419 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 KLRC1P26715 233 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 PSMA5P28066 241 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 ADD1P35611 737 aaKnown RBP6.6□□□□□ -1.35
USP3-212ENST00000559276 NAPAP54920 295 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 SMAD4Q13485 552 aaKnown RBP6.6□□□□□ -1.35
USP3-212ENST00000559276 KCNC3Q14003 757 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 DSC3Q14574 896 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 PKN1Q16512 942 aa6.6□□□□□ -1.35
USP3-212ENST00000559276 PAN2Q504Q3 1202 aaKnown RBP6.6□□□□□ -1.35
USP3-212ENST00000559276 HERC4Q5GLZ8 1057 aaPredicted RBP6.6□□□□□ -1.35
USP3-212ENST00000559276 FAM102BQ5T8I3 360 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms