RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 FMR1NBQ8N0W7 255 aaPredicted RBP7.33□□□□□ -1.24
CHRNA3-204ENST00000559002 METTL13Q8N6R0 699 aa7.33□□□□□ -1.24
CHRNA3-204ENST00000559002 SYT2Q8N9I0 419 aaPredicted RBP7.33□□□□□ -1.24
CHRNA3-204ENST00000559002 MCPH1Q8NEM0 835 aa7.33□□□□□ -1.24
CHRNA3-204ENST00000559002 ENGASEQ8NFI3 743 aa7.33□□□□□ -1.24
CHRNA3-204ENST00000559002 LRRC15Q8TF66 581 aa7.33□□□□□ -1.24
CHRNA3-204ENST00000559002 MAP7D2Q96T17 732 aa7.33□□□□□ -1.24
CHRNA3-204ENST00000559002 MTRQ99707 1265 aa7.33□□□□□ -1.24
CHRNA3-204ENST00000559002 RUSC1Q9BVN2 902 aa7.33□□□□□ -1.24
CHRNA3-204ENST00000559002 SUGCTQ9HAC7 445 aa7.33□□□□□ -1.24
CHRNA3-204ENST00000559002 KCND2Q9NZV8 630 aa7.33□□□□□ -1.24
CHRNA3-204ENST00000559002 ATP11BQ9Y2G3 1177 aa7.33□□□□□ -1.24
CHRNA3-204ENST00000559002 TCHHQ07283 1943 aa7.33□□□□□ -1.24
CHRNA3-204ENST00000559002 GRIN2DO15399 1336 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 SMIM35A0A1B0GVV1 85 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 DCDC2CA8MYV0 355 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 ZBTB42B2RXF5 422 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 TREHO43280 583 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 GAS2O43903 313 aaKnown RBP7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 PQBP1O60828 265 aaKnown RBP7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 FAM13AO94988 1023 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 RPLP2P05387 115 aaKnown RBP7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 IDEP14735 1019 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 CYP11B2P19099 503 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 GUCY2CP25092 1073 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 HOXC8P31273 242 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 CLCN3P51790 818 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 ASIC1P78348 528 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 ZNF200P98182 395 aaPredicted RBP7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 RAD51AP2Q09MP3 1159 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 SNW1Q13573 536 aaKnown RBP7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 POSTNQ15063 836 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 NFKBIBQ15653 356 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 PTGISQ16647 500 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 SKOR2Q2VWA4 1001 aaPredicted RBP7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 RINT1Q6NUQ1 792 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 EFCAB12Q6NXP0 572 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 TAF2Q6P1X5 1199 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 MAEAQ7L5Y9 396 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 DYMQ7RTS9 669 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 RSPH3Q86UC2 560 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 GRAMD1CQ8IYS0 662 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 LRRC71Q8N4P6 559 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 CCDC155Q8N6L0 562 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 SLC43A3Q8NBI5 491 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 GPT2Q8TD30 523 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 TCP11Q8WWU5 503 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 STAMQ92783 540 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 KIFAP3Q92845 792 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 CCDC47Q96A33 483 aaKnown RBP7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 PAGE5Q96GU1 130 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 DRC1Q96MC2 740 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 TIGD1Q96MW7 591 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 SCLT1Q96NL6 688 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 TIPINQ9BVW5 301 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 FAM49AQ9H0Q0 323 aaPredicted RBP7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 POLR3FQ9H1D9 316 aaPredicted RBP7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 NUP62CLQ9H1M0 184 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 ZHX3Q9H4I2 956 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 DHX33Q9H6R0 707 aaKnown RBP7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 TRMT13Q9NUP7 481 aaKnown RBP7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 KBTBD4Q9NVX7 518 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 AKT3Q9Y243 479 aa7.32□□□□□ -1.24
CHRNA3-204ENST00000559002 SCN10AQ9Y5Y9 1956 aa7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 IGKV6-21A0A0C4DH24 114 aa7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 NPHP3-ACAD11A0A0J9YXS1 232 aa7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 MBLAC1A4D2B0 266 aaPredicted RBP7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 MYMKA6NI61 221 aa7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 M0QZ92 97 aa7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 GTPBP6O43824 516 aaPredicted RBP7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 B4GALT4O60513 344 aa7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 HIP1RO75146 1068 aa7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 SMC2O95347 1197 aa7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 MYL1P05976 194 aa7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 CDK7P50613 346 aa7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 RTP1P59025 263 aa7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 ADAM17P78536 824 aa7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 PTK7Q13308 1070 aa7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 SNX17Q15036 470 aa7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 PPP2R5AQ15172 486 aa7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 CAMK4Q16566 473 aa7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 TRIM60Q495X7 471 aa7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 MARCH8Q5T0T0 291 aa7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 C1orf53Q5VUE5 145 aa7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 IER5Q5VY09 327 aa7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 RUFY4Q6ZNE9 571 aa7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 DNAH12Q6ZR08 3092 aa7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 C1orf186Q6ZWK4 172 aa7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 SERINC5Q86VE9 423 aa7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 CCDC65Q8IXS2 484 aa7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 PSPC1Q8WXF1 523 aaKnown RBP7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 DDX12PQ92771 950 aa7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 SYAP1Q96A49 352 aaPredicted RBP7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 TMEM143Q96AN5 459 aa7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 ZBTB10Q96DT7 871 aa7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 IFT74Q96LB3 600 aa7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 CEP89Q96ST8 783 aa7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 REEP2Q9BRK0 252 aa7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 TRIM9Q9C026 710 aa7.31□□□□□ -1.24
CHRNA3-204ENST00000559002 TRPV6Q9H1D0 765 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms