RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 HYAL1Q12794 435 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 PAK2Q13177 524 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 DRP2Q13474 957 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 BTG3Q14201 252 aaPredicted RBP6.28□□□□□ -1.4
SMAD3-209ENST00000558894 KIZQ2M2Z5 673 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 EARS2Q5JPH6 523 aaKnown RBP6.28□□□□□ -1.4
SMAD3-209ENST00000558894 FAM102BQ5T8I3 360 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 FAM160B1Q5W0V3 765 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 PDXDC2PQ6P474 469 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 LRRC55Q6ZSA7 311 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 NPAS4Q8IUM7 802 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 CCDC148Q8NFR7 591 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 SPPL3Q8TCT6 385 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 CCDC12Q8WUD4 166 aaPredicted RBP6.28□□□□□ -1.4
SMAD3-209ENST00000558894 TNPO1Q92973 898 aaKnown RBP6.28□□□□□ -1.4
SMAD3-209ENST00000558894 TNFRSF25Q93038 417 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 P2RX5Q93086 422 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 COL26A1Q96A83 441 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 PABPC5Q96DU9 382 aaKnown RBP6.28□□□□□ -1.4
SMAD3-209ENST00000558894 OSMRQ99650 979 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 PHF20Q9BVI0 1012 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 PLVAPQ9BX97 442 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 NIFKQ9BYG3 293 aaKnown RBP6.28□□□□□ -1.4
SMAD3-209ENST00000558894 LMAN2LQ9H0V9 348 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 UNC45AQ9H3U1 944 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 NSUN3Q9H649 340 aaKnown RBP6.28□□□□□ -1.4
SMAD3-209ENST00000558894 CWH43Q9H720 699 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 ALG13Q9NP73 1137 aaKnown RBP6.28□□□□□ -1.4
SMAD3-209ENST00000558894 HCSTQ9UBK5 93 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 TPCN1Q9ULQ1 816 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 NAP1L2Q9ULW6 460 aaPredicted RBP6.28□□□□□ -1.4
SMAD3-209ENST00000558894 ST3GAL5Q9UNP4 418 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 CYP46A1Q9Y6A2 500 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 DENND4AQ7Z401 1863 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 BAHCC1Q9P281 2608 aa6.28□□□□□ -1.4
SMAD3-209ENST00000558894 STK36Q9NRP7 1315 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 TDRD15B5MCY1 1934 aaKnown RBP6.27□□□□□ -1.41
SMAD3-209ENST00000558894 C19orf67A6NJJ6 358 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 WDR64B1ANS9 1081 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 PI4K2BG5E9Z4 385 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 H3BQ06 376 aaPredicted RBP6.27□□□□□ -1.41
SMAD3-209ENST00000558894 EML1O00423 815 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 SLC37A4O43826 429 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 PFKFB2O60825 505 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 TBX10O75333 385 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 RPS6KA5O75582 802 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 LARGE1O95461 756 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 SEC24BO95487 1268 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 VTNP04004 478 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 OATP04181 439 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 PSAPP07602 524 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 SARSP49591 514 aaKnown RBP6.27□□□□□ -1.41
SMAD3-209ENST00000558894 GPC3P51654 580 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 CLCN3P51790 818 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 SSRP1Q08945 709 aaKnown RBP6.27□□□□□ -1.41
SMAD3-209ENST00000558894 SPIRE1Q08AE8 756 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 ST3GAL1Q11201 340 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 STK3Q13188 491 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 ADAM15Q13444 863 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 KCNC3Q14003 757 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 PTPROQ16827 1216 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 TIGD5Q53EQ6 642 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 EFCAB12Q6NXP0 572 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 MOXD1Q6UVY6 613 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 FAM43BQ6ZT52 329 aaPredicted RBP6.27□□□□□ -1.41
SMAD3-209ENST00000558894 ANO5Q75V66 913 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 ADGRD2Q7Z7M1 963 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 ZNF598Q86UK7 904 aaKnown RBP6.27□□□□□ -1.41
SMAD3-209ENST00000558894 BLIDQ8IZY5 108 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 FAM177A1Q8N128 213 aaPredicted RBP6.27□□□□□ -1.41
SMAD3-209ENST00000558894 ZNF579Q8NAF0 562 aaKnown RBP6.27□□□□□ -1.41
SMAD3-209ENST00000558894 KLHL23Q8NBE8 558 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 BICD2Q8TD16 824 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 OXER1Q8TDS5 423 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 HAS1Q92839 578 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 MSLNLQ96KJ4 702 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 PPP1R16BQ96T49 567 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 ADAM2Q99965 735 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 KCNMB3Q9NPA1 279 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 DISC1Q9NRI5 854 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 CLEC1BQ9P126 229 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 WRAP73Q9P2S5 460 aaPredicted RBP6.27□□□□□ -1.41
SMAD3-209ENST00000558894 VAV3Q9UKW4 847 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 KCNJ14Q9UNX9 436 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 RWDD3Q9Y3V2 267 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 PCDHGC5Q9Y5F6 944 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 KMT2EQ8IZD2 1858 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 WDFY4Q6ZS81 3184 aa6.27□□□□□ -1.41
SMAD3-209ENST00000558894 PLXNA3P51805 1871 aa6.26□□□□□ -1.41
SMAD3-209ENST00000558894 C2orf16Q68DN1 1984 aa6.26□□□□□ -1.41
SMAD3-209ENST00000558894 FAM205CA6NFA0 338 aa6.26□□□□□ -1.41
SMAD3-209ENST00000558894 WNT7AO00755 349 aa6.26□□□□□ -1.41
SMAD3-209ENST00000558894 MAGEB2O15479 319 aa6.26□□□□□ -1.41
SMAD3-209ENST00000558894 MAFO75444 373 aaPredicted RBP6.26□□□□□ -1.41
SMAD3-209ENST00000558894 GLP2RO95838 553 aa6.26□□□□□ -1.41
SMAD3-209ENST00000558894 FGFR1P11362 822 aa6.26□□□□□ -1.41
SMAD3-209ENST00000558894 ATF7P17544 494 aaPredicted RBP6.26□□□□□ -1.41
SMAD3-209ENST00000558894 EIF4BP23588 611 aaKnown RBP6.26□□□□□ -1.41
SMAD3-209ENST00000558894 SFNP31947 248 aa6.26□□□□□ -1.41
SMAD3-209ENST00000558894 JAK3P52333 1124 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms